Solea solea (common sole): 131447645
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Entry
131447645 CDS
T10853
Symbol
col18a1a
Name
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ssoe Solea solea (common sole)
Brite
Exosome [BR:
ssoe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131447645 (col18a1a)
Proteoglycans [BR:
ssoe00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
131447645 (col18a1a)
Glycosaminoglycan binding proteins [BR:
ssoe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131447645 (col18a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131447645
NCBI-ProteinID:
XP_058475533
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Position
2:32883405..32954318
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AA seq
1466 aa
AA seq
DB search
MMPKMRIEVGVLILLANWVVYSDAWFWTWTGTTTLAPMMDHEGSGSPAGSGEQPPEDTVG
AQIIDERHGIQLTGQTTQTLQTTEAPLLTTVVASPFTTTQLENDQASEKGTVSSHISKPG
NGTSSLTEDSGVTLLQLISDPPPSEITQVYGPDNSPGYVFGPTANTGQLARAHLPNSFYR
DFSLIFNLKPTSDKGGVLFSVTDAAQKIMYVGVKLSAVQGGNQNVILYYTEPGSQQSYEA
ARFPVSSMRDTWTRFAIAVRDDKVMFYHNCDAAPQVMRIERSPDDMELDTGAGVFVGQAG
GADLDKFLGVIGELRVVGDPRAAERHCEDDEDDSDMASGEGSGYEQPRPTRPAVEKHRWT
TAPPAFSPIPQPPVTKTEESVSVSKETVSNTQRVSVSVESRPELPGSPGQAGSKGERGDR
GEKGERGPVGPKGESGSSVRGGARGEKGEPGERGLKGSAGFGYQGKKGEPGPAGPAGLPG
PPGPTSEYSLSNDGTIVSAGPRGPPGPQGGPGPAGPPGAEGEPGDPGEDGKLGPDGPPGF
PGTPGDSGPKGDKGDRGDGHPGPRGPPGPPGPPGPGLRSTFVDMEGSGFPDVESIRGLPG
PPGPPGLPGLPGPSTAGTVSSSGAFGPPGKDGAPGQVGLPGLPGTDGLPGTPGLKGEKGD
SGELGLPGALGQKGAQGDPGLPGTAGQTGLAGLPGPMGPVGPAGPPGPPGPSYRVGFDDM
EGSGGGFTYGHSGGRGQEGKQGPPGLPGLPGKPGFPGLPGQKGIEGPIGRDGQPGLDGFP
GPQGPRGDKGDKGERGEAGRDGTGLAGPPGPPGPPGQIIYSTSGNLDGVVGGVGPQGGPG
LPGQAGFPGPVGPKGDRGDPGLPGYAVKGEKGEPGVVVGPDGNLHYLDGLRGLKGDHGSP
GPVGPPGQYGPPGIKGEIGMPGRPGRPGVNGYKGEKGESSGGAGYGYPGVPGPPGPPGLP
GPPGPPIPLDRFNRYDETSRNYQVKGEKGDRGDRGIPGIPGTASNFDIYAFKNEMKGETG
EAGVKGAKGEPGGGYYDPLFGGTQGPAGPPGKPGLTGPKGDSIIGPPGPQGPPGPTGVGY
DGRPGSPGPPGPPGPPGSSPGAYRPNHSVNIPGPPGPAGPPGTPGHSSSVIVLRSYDTMI
ASARRQSEGSLIYIIDKADLYLRVRDGLRQVMLGVYQPFFRDLENEVAEVQPPPVILYPQ
SQDQSQNNGAGHYSQGGSSIRPIEPPPRPPTDPRFPPQYDPRFPDPRHTGHTDGTLVTER
TENRFPVTPQRRPSVPLPQPGVHVHTASVSGLHLIALNAPQTGNMRGIRGADFLCFQQAR
AVGLKGTFRAFLSSKLQDLHTIVRRSDRENLPILNLKDQVLFNSWDSLFGDDASKMSENI
PIYSFDGRDIVRDSAWPEKMVWHGSDNKGHRQTDHYCETWRAGDRAVTGLASALQSGHVL
QQTSSSCSGSYIVLCIENAFITQSKK
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaagatgaggatagaggttggagttttgattttgttggccaactgggtggtc
tactcagatgcctggttctggacctggactggtacaacaactttggcaccaatgatggac
catgaggggtcaggcagtccagcaggtagtggagaacagccaccagaggacacagttgga
gcgcagatcattgatgagagacatgggatccaattgactgggcagaccactcagaccctt
cagaccactgaggctcccttactgaccactgtagtggccagccccttcactacaacacag
ctggagaatgaccaggcatcagaaaaaggcacagtttcgtctcacataagtaaacctggt
aatggcacatcttctttaacggaagacagtggagtcactttgctgcagctgatcagtgac
cctcctcccagtgagattacccaggtgtacggacccgacaatagccccggatatgtcttc
ggacccacggccaacacgggccagctggcacgcgcccacctgcccaactctttctatcgg
gacttctccctcatcttcaacctgaaacccacctctgacaagggtggagtcctcttctct
gtcacggacgccgctcagaagatcatgtacgtcggcgtgaagctgtcggccgtgcagggc
ggcaaccagaacgtcatcctgtactacacggagcccggctcgcagcagtcgtacgaagcg
gccaggttccccgtgtcctccatgagggacacctggacccgtttcgccattgctgtgagg
gacgacaaggtgatgttctaccacaactgtgacgcagcccctcaggtgatgcgcatcgag
aggtccccggatgatatggagctggacactggtgccggagtctttgtcgggcaagctgga
ggggctgatctagacaagttcctgggcgtgatcggggagctgagggtggtgggagacccc
cgtgctgccgagagacactgcgaagacgacgaggacgactcagatatggcttcaggcgaa
ggaagtggctacgagcaaccgagacccacaagaccagccgtggagaaacatagatggacg
actgctcctccagctttttcacccattccgcagcctccagtgaccaagacagaggagtca
gtgtcagtttccaaagagacagtcagtaacacgcagcgtgtttcagtgtctgtggagtcc
aggcccgaacttcccggctcaccaggacaagctgggtctaaaggagagaggggtgacaga
ggagagaaaggagaaaggggtccagttgggccaaagggagaatctggatccagcgtccgg
ggtggagctcgtggggagaagggtgaacctggggaaaggggattaaaggggagcgcagga
tttggctaccaaggaaagaagggtgaacctggtcccgctgggcccgccggcctccccggc
cctccaggccccacctccgagtattcacttagcaatgacggcacaattgtttcggcagga
ccgcggggaccacctggaccacaaggtggtccgggcccagcaggaccaccaggagccgaa
ggagagccaggtgaccctggtgaggatggaaaacttggtcctgatggacccccaggcttc
cctggaaccccaggagactccggacctaaaggagataagggagaccgtggagatggtcac
cctggccccaggggccccccaggacctccagggcctcctggaccaggactcagatctacg
tttgtggacatggaaggctccggtttccctgacgtggaatccattcggggactacctggg
ccacctggtcctcccggtctccccgggcttcctggtccctccacagctggtacggtgtca
agttctggtgcatttggacccccaggaaaggatggggcacccggtcaagttggtttgccc
ggtttaccagggactgatggccttccgggaactcctggtcttaagggagaaaagggtgat
tcgggcgagctgggtcttccaggagcactgggacagaagggagctcaaggagaccctggt
ttacctggaactgcaggacagactggactggctggtctgccaggaccgatgggaccagtt
gggccagctgggcctcccggacctcctggaccaagttatcgcgttggctttgatgacatg
gaaggctctggtggcggtttcacctacggacattccggtggccgaggacaggaaggaaaa
cagggtccgcctggtttacctggacttccgggtaaacctggattccccggcctgccaggt
cagaagggcattgagggtcctattggacgagatgggcaacctgggttggatggcttccct
ggacctcaggggccaaggggtgacaaaggtgacaaaggagagaggggtgaagcaggtcga
gatggaaccggacttgcgggtccaccaggcccccctggacctccaggacaaatcatctac
tccacatctggcaatttagacggtgtggtcggcggtgtcgggcctcagggtggacctggt
ttgcctggtcaagctggattccctggtcccgtcggaccaaagggtgacagaggtgaccct
ggtctgcctggctacgcagtgaagggtgagaaaggtgagccaggcgtcgtcgtcggacct
gacggaaatcttcattatctggacggattaagaggtttgaagggagaccatggatctcct
ggtcctgttggaccgcctggccagtacgggcctcctggcatcaagggtgaaattggaatg
cctggaagacctggtcgccctggtgtaaatggatataagggtgagaaaggagagtcttca
ggtggcgctggctatggctacccaggtgtccctggtcctccaggaccgcctgggctacct
ggacctcctggacctcccattcctcttgatcgcttcaatcgctatgatgaaacttcaagg
aattaccaagttaagggggaaaaaggagacagaggcgacagaggaattccaggaatccca
ggaacagcttcaaattttgatatttatgcattcaagaatgaaatgaagggagagactggt
gaagcaggtgtgaagggagcaaagggagagcccggtggtggatattatgacccacttttt
ggaggaacccagggcccagcggggcctcccggcaaaccaggcctaacaggtccaaaggga
gattccattattggaccccctgggccccagggtccaccagggccaacaggcgtaggttat
gatggacgcccaggttctcctggaccacctggacctccaggacctccaggctcttctcct
ggagcatacaggccaaatcattccgtcaatatccctggacctccaggccctgcaggtcca
cctggaactcctggtcactcctctagtgtcatagtgttgagatcctatgacaccatgatt
gcctctgccagacgtcagtcagagggcagcctcatctacatcatcgacaaagcagacctc
tatttaagagtacgcgatggactgcgacaagtcatgctgggagtgtaccaacccttcttt
agagatctggagaacgaggtggcagaggtccagcccccgcctgtgatcctgtatcctcag
tcccaggaccagtcccaaaataacggagccggtcactactcccagggcggctcctccata
cgtcccatcgagcctccgccgcggccgcctacagatcccagattccccccacagtacgac
cccaggttcccagatcccagacacaccggccacacggatgggacattagtcaccgagagg
acggagaacagattcccagtcacgccacagagacgacccagcgtgcctctgccacagcct
ggagtacatgtgcacacagcatcagtatcaggactgcatctcatcgccttgaacgccccc
caaactggtaacatgcgaggaatccgcggggcagacttcctgtgcttccagcaggcccgc
gctgtgggcctgaagggaaccttcagagcgttcctgtcctctaagctccaggacctgcac
accatcgtccgcaggtccgacagggagaacctccccatcctgaatctcaaggaccaagta
ttgtttaacagttgggactcgctcttcggtgacgatgcgagcaaaatgagtgagaatata
ccgatctactcctttgatggcagagacatcgtcagggacagcgcgtggccagagaaaatg
gtctggcacggatcggacaacaaaggccaccggcaaacagaccactactgtgaaacatgg
cgagcaggtgaccgcgcggtcactggtctggcatcagcgctccagagcggccatgtcctg
cagcagacgtccagcagctgctccggctcatacatcgtcctttgcattgagaatgccttc
atcacacagtccaaaaaataa
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