Solea solea (common sole): 131447817
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Entry
131447817 CDS
T10853
Symbol
col28a1a
Name
(RefSeq) collagen, type XXVIII, alpha 1a
KO
K23619
collagen type XXVIII alpha
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssoe01002
]
131447817 (col28a1a)
Peptidases and inhibitors [BR:
ssoe01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
131447817 (col28a1a)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
PqqF-like_C_4
Motif
Other DBs
NCBI-GeneID:
131447817
NCBI-ProteinID:
XP_058475877
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Position
20:complement(5537826..5556891)
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AA seq
1170 aa
AA seq
DB search
MTMLRSQFGLKVLIVILTLTNSTTCQSRKKKGQREDNYVIKSEAKTLICPVEIMFIVDSS
EKAKAQLFERQKVFLLRFSTKLAQLHSAGWRLRLRLAALQYSSTVSVEHNFRDWQDVDVF
QSRVAAMSFIGHGTYSAYAITNATQVFSRETSPSSLRVALLMTDGTDHPRSPSAVRAAAE
AKRHSITLFVIRLSSPTKDGPMSTKLRSIASAPPQQHVFGLTDSQLDERLFSELNTIVKT
RCPHPKSCLCEKGERGYPGYPGTPGEQGSGGALGPKGSHGEHGMNGRPGLEGLEGKPGSK
GEKGEQGECGASGKKGEKGTDGLAGPGGTRGEKGAMGTPGEQGPEGPSGSKGERGPRGAP
GPPGDTGVGFPGPKGDRGTQGRPGPPGPIGVGEPGMTGSSGPPGIQGSPGFPGEGLPGPK
GDRGYEGPKGGRGPPGLGYKGDKGNTGAPGLPGLVGFPGPSNQGEKGDQGPAGPSGPRGP
PGLGIVGPKGDQGFPGDPGPPGEWGLGDTGPKGEPGPNGTAGIPGIPGEDGLPGPKGETG
LQGLRGLEGSPGNGIPGEKGDRGDRGPRGLPGPPGLIGPAGAKGEPGSRGMMGQPGPAGQ
GLPGSKGDPGTVGPYGPMGEPGIGIIGSKGNKGNSGPVGQPGIKGEGVPGPPGLPGLPGV
QGDTGPEGKGLPGPKGDRGLRGLPGPTGPPGIRLYGPKGSIGQLGPPGLLGLPGEGIQGP
KGESGFRGPMGPRGLPGDGLPGEKGDRGIPGGQGKKGDKGVYGEPGSTGPKGRPGGKGEP
GLTREEVIRIIREICGCGLKCREAPLELVFVIDSSESVGPDNFELVKDFVNALIDQLSVS
RETTRIGVVLYSQVNMVVVSLQQTLSQDEITAAIQTMPYLGEGTLTGSAIHQASELFQAS
RPGVRKVALVLTNGQADPQDLRHFQETALDAHAQGVEMIVVGVINKTDLLYDDFQQEINV
IASEPAEEHIYLVDDFRTLPTLEGTILSQICGQDDTANFLPNSVYRAVETHPDVPGDSGF
HTHSKEFAEEEDTHSPESRWPEEDLVDTTPLLEPWSRRSNITLRSNGAGEKPGVVMISTV
GPQNPSDWLHEAKSTQAPVSPPPPPPPTDSSLPAEGCSQPLDPGSCREYIVRWYYDPEAN
TCAQFWYGSCKGNENNFESEANCRDSCIYT
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctgcggtcacagtttggactaaaggtgctcattgtcattttgacgctgaca
aactcaaccacgtgccaaagcagaaagaagaaaggacagagagaggacaactatgtcatc
aagagtgaagccaaaaccctgatctgcccagtggagatcatgttcatcgtggacagttcg
gagaaagccaaagctcagctgtttgagcgacagaaggtgttcctcctacgatttagcacc
aagctggcacagctccactccgctggctggcgcctgcgtcttcgcctggctgccctgcag
tacagcagcaccgtttcagtggagcacaacttcagagactggcaggacgtggatgtgttc
cagagccgcgtggcagccatgagcttcatcggccacggtacctactccgcctatgccatc
accaacgccacccaggtgttcagccgcgagacatcccccagcagcctgagggtggcgctg
ttgatgacggacggaacggaccacccccgcagccccagtgctgtgagagctgctgccgag
gccaaacgacacagcatcacgctgtttgtcatcaggctgtccagcccgaccaaggacgga
cctatgagtacgaagctgcgctccatcgccagcgctccaccacagcagcacgtcttcggc
ctcaccgacagtcagctggatgagcgactcttcagtgaactgaacaccatagtgaaaact
aggtgtccacacccaaagtcctgcctgtgcgaaaagggggagagaggttaccctggatat
ccagggacaccaggggaacaagggtctggtggagcgcttggtccaaagggatctcatggg
gaacacggtatgaatggacgtccaggactggagggccttgagggtaaacctggcagcaaa
ggggaaaagggagaacagggtgaatgtggtgcctctggaaaaaaaggagaaaagggaact
gatggactcgctggccctggaggcaccagaggagagaagggagccatgggaacacctgga
gagcaaggtccagaggggccatcaggctctaaaggagagcgaggaccaaggggtgcacct
ggacctccaggggatacaggggttgggttccctggtcccaagggcgacagaggaacccag
gggagaccaggaccacctggacccatcggtgtgggtgaaccagggatgacaggttcatcg
gggccaccagggatacaaggatctccagggtttcctggtgagggtctgccaggaccaaag
ggtgacaggggctatgaggggcctaagggcggccgcggacctccagggttggggtacaaa
ggtgataaggggaacacaggagctcctggtctgccaggtttggttgggtttccagggcca
agcaaccaaggagaaaagggggaccaagggcctgctgggccctctggtcctaggggacct
cctggattgggtatagttggaccaaagggtgaccagggtttccctggagaccctggacct
ccgggagagtggggtcttggtgacacaggaccaaaaggagagccaggacctaatgggacc
gctgggatacctggtattcctggtgaggatggacttcccgggcctaagggagagacaggg
ttgcaaggtctgcgaggcctcgagggatcacctgggaatggtattcctggagaaaaggga
gatagaggtgatcgtgggccaagaggacttccagggcctcctggcctgattggccctgct
ggagctaagggggaacctgggagccgaggaatgatgggccaacctggacctgctgggcaa
ggccttcctggatcaaagggggatcctgggactgtgggaccatatggacccatgggagaa
cctggaattggaattattgggtcaaagggcaataaaggaaattctgggcctgtgggacaa
ccagggataaagggagagggcgtcccaggaccaccaggtcttcctggcttaccaggagtg
caaggagatacaggccctgaagggaaaggcttacctggacctaagggtgacagggggcta
cgggggctcccaggcccaacaggtcctcctggaattagactttatggaccaaagggttct
ataggacagctaggtcccccaggcctcctcgggcttccaggagagggcatccagggacca
aagggtgagtctgggtttcgagggccaatgggccctcgggggttgccaggagacggcctc
ccaggggagaagggtgacagaggcatccctggaggccagggaaagaaaggagacaaggga
gtctatggagaacctggttctactggaccaaagggcagacctggagggaagggtgaacca
gggctgacaagagaggaggtcatcagaataataagggaaatctgtggctgtggtctgaag
tgcagagaggcacctctggagctggtgtttgtcatagatagctctgagagcgtgggacca
gacaactttgagctggtgaaggactttgtcaatgctctcattgaccagctgtcggtaagc
agagagactacccgaataggtgtggtcctctacagccaggtaaacatggtggtggtaagt
ctgcagcaaacgttaagccaagatgaaatcacggctgccattcagacgatgccatacttg
ggtgaaggcaccctcaccggcagtgccatccatcaagctagtgagctgttccaagcctcg
cggcccggtgtgaggaaagtggccttggttttaacaaatgggcaggctgacccgcaagac
ctcagacattttcaagagacagccttggatgcacatgctcagggggttgagatgattgtt
gtgggagtcattaacaagaccgaccttctgtatgatgacttccagcaagagatcaatgtg
attgcatctgaacctgctgaggagcatatctaccttgtagatgacttcaggacacttccc
actctggaaggcacaatactgagtcagatttgtgggcaggatgacacagcaaactttcta
ccaaactcggtctatcgagctgtggaaacccacccagatgttccaggggacagcggcttt
catacccattccaaagagtttgcagaggaggaagacacacactcccctgaatccaggtgg
cctgaagaggacctggttgataccacaccgttgctggagccctggagcaggcgttcaaac
atcacattgcgttcaaacggtgccggagagaagccgggcgtagtgatgatctccacggtg
ggtccacagaatccatctgattggctgcatgaggcaaagagcacacaggcaccggtgagc
cctccaccccctccacccccgacggactcatcgctgccagctgaaggctgcagtcagcct
ctggacccaggttcctgtcgggagtacatagtcaggtggtactacgaccctgaggccaac
acctgtgcccagttctggtacggcagctgcaagggtaacgaaaacaactttgagtctgaa
gccaactgcagggattcctgcatctacacgtag
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