Solea solea (common sole): 131448323
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Entry
131448323 CDS
T10853
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04140
Autophagy - animal
ssoe04148
Efferocytosis
ssoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131448323 (vps16)
04148 Efferocytosis
131448323 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131448323 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131448323 (vps16)
Membrane trafficking [BR:
ssoe04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131448323 (vps16)
Hops complex
131448323 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
131448323
NCBI-ProteinID:
XP_058476659
LinkDB
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Position
2:complement(64964..76430)
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AA seq
835 aa
AA seq
DB search
MSFITANWNPLGDAFYRKTELYDMCWNLRDSGLKDSLVAAAPYGGPIALLREPHRRSPSS
RPQLEVYLASGVSITSFPWKSGPVVHIGWTVTDELLCVQEDGSVLIYDLFGSFKRHFSMG
QEVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLHGKPSSWLV
LTQDRQTKVILSNGPELFVLDNTSCTPVCPPGLSPQYGSVVHMCVSFSYKYLSLFTDTGH
LWTGSSNLQDKLSIVDTKKKTTPSQMVWCCRPQSQQLSVVLMWDRLLLVAGICGDTIQFP
VDDPCVLVGELDGVRIINSTNQDLLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQK
ADEYLREIKEQSMLGEAVRQCVEAAAHEYDANTQKSLLRAASFGKCFLVDFSPDQFVTMC
RELRVLNTVRDGAVGLPLTHTQFKQLTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVS
RVLKHWASCKVQQKDLSDEAIARAVCVKVGDAPGVSYSDIAAKAYECGRTELAIKLLDFE
ARSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNELNRGDFFMMLRNQPVAQS
LYRQFCKLQEQETLKDLYNQDDDHQELANYYITASYREKRLETRLSVLQKAVDEFNKAKN
EFAAKATEEEMRLLRFQRKLDDEKGAGLLGLSLQETMEVLLSLGLHKHTEQLYRDFRLPD
KRYWWLKLKSLAEKHEWEELEKFSKSKKSPIGYLAFVDVCMKSNNKSEARKYVSKVTPEQ
KVRAHMVIGDLEGAADAAIERRNDSEMGAVLSRCSASDCLLIDRLNRARVSASKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcatcaccgccaactggaacccgctgggagacgctttttaccgtaagacagag
ctgtacgacatgtgctggaacctcagagactcaggactcaaagacagtcttgttgctgcc
gctccgtatggaggaccaatagctctcctcagagaacctcacagacgttctcccagttct
cgacctcagttggaagtttacttggcgtctggagtttctatcaccagttttccttggaag
agtggacctgttgtccatattggttggacagtcactgatgagttgttgtgtgtccaagaa
gacggctcagttctgatctacgacttgtttggatcctttaagagacactttagcatggga
caggaagtggtccagagtcaggtattagaggccaaagtcttccactctccatatggaaca
ggtgttgccatagtaacaggctcctcccgcttcaccttggcgaccaacattgacgatctg
aagctgcgcaggttacctgaagtcccaggtctgcatggtaaaccgtcctcctggctcgtc
ctcactcaggacagacaaaccaaagttattctgtccaacggaccagaactgtttgtcctg
gacaacacgtcctgcacccctgtgtgtcctccaggtctcagtcctcagtatggcagcgtc
gtccacatgtgtgtgtctttcagttacaaatacctgtctctcttcactgacactggacac
ctatggacaggctcttccaacctgcaggacaaactcagtatagtggacacgaagaagaag
acaacacccagtcaaatggtttggtgttgcagaccccagagccagcagctgtctgtggtg
cttatgtgggacagactcctcctggtggcaggaatctgtggtgacaccatccagttccca
gtggatgacccgtgtgttctggttggagaactggatggagtccggatcatcaactccacc
aaccaggaccttcttcaggaggttcctctggtctgtcaggacatctttaagatcgcgtcc
atggctcctggagctctgctgctggaggctcaccgcgagtatgagaagtccagtcagaag
gcagacgagtatctgcgggagatcaaggagcaaagcatgctgggagaagcagtgagacag
tgtgtggaggcagcagctcatgagtatgacgccaacacccagaagtctctgctgcgggcg
gcgtcctttggaaagtgtttcctggtggacttcagtccagatcagtttgtgaccatgtgc
agagaactgcgagtcctcaacacggtcagagatggcgctgtgggtctgccactcacacac
acacagtttaaacagttgactctgcaggttctgatagacaggctggtctacagacagttt
tatccattagccatagaaatctgtcgttacctgaagattcctgattaccagggcgtcagt
cgagtcctcaaacactgggcctcatgtaaggtgcagcagaaggacctatcagacgaggcc
atagctcgagcagtgtgtgtgaaggtgggagacgctcctggagtgtcttactctgacatc
gcagctaaagcctacgagtgtggacgcactgagctggccatcaagctgctggactttgag
gctcgctctggagaacaggttcctctgctgctgaagatgaagagaagtcagttagctctg
agtaaagctgtggagagtggagacactgacctggtttacacagtggtcacctacctgaag
aacgagctgaatcgaggagactttttcatgatgctgaggaaccagccggtcgctcagagt
ctctacagacagttctgtaaactacaggaacaggaaactctgaaggatctttataaccag
gacgatgatcatcaggagcttgctaactattacatcactgctagttacagagagaagaga
ctggagacacgtctgtctgtcttacagaaagctgtcgacgagttcaacaaagcgaagaat
gaatttgctgcaaaggccacagaggaagagatgcgtctccttcgttttcagcggaaactg
gatgatgaaaagggggcggggctactgggactgtctcttcaggaaaccatggaggttctg
ctgtcgttaggacttcataaacacacggagcagctttaccgagactttagacttcctgac
aagagatattggtggttgaagctcaagtctctggcagagaaacacgagtgggaggagtta
gagaaattctctaagagtaaaaagtctcctattggctacctggcttttgttgacgtgtgt
atgaagagtaacaacaagtctgaagccaggaagtacgtttccaaggtaacacctgagcag
aaagtccgagctcacatggtcatcggcgacctggaaggagccgccgacgccgccatcgag
cgcaggaacgactctgagatgggggcggtgctttccagatgctccgcctctgattgtcta
ctgattgacaggctgaacagagccagagtctctgcctccaagaagtga
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