Solea solea (common sole): 131448588
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Entry
131448588 CDS
T10853
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssoe03016
]
131448588 (trub1)
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
131448588 (trub1)
Transfer RNA biogenesis [BR:
ssoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131448588 (trub1)
Prokaryotic type
131448588 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PT
GAIN_A
Pus10_C
Motif
Other DBs
NCBI-GeneID:
131448588
NCBI-ProteinID:
XP_058477172
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All DBs
Position
21:7293857..7297961
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AA seq
343 aa
AA seq
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MAVAQHCFSKPPSKKKSETSMAGSAAPITSSLAKLQSLNGLFAIYKKQGPTSADVLNTLK
ETLLKEAGVKNANPRKRKKQSLKLGHGGTLDSAASGVLVVGVGTGTKTLSTMLAGSKKYV
AVGELGKATDTLDATGKVTLEKDFDHITRVDMEEKLKSFTGDIMQVPPLYSALKKDGQRL
SVLLKQGHKVEAKPARPVTVYNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCA
HVKTLVRTKQGQFTLEEHALPEEKWTLEHIVCSMQPCSVSEQSTKPSDQPAEKTSDQPAE
KPSDQPAEKISDQPAEKMSDQPVEELSEEPSEKNSVNHVENKT
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggcgcaacactgcttctctaaaccaccgtcgaagaagaagtctgaaacgagc
atggccggcagcgctgcaccgataacctcttctctggctaaactccagtctttgaatgga
ttgtttgctatttataaaaaacagggaccgacatctgcggacgtgttgaatacactcaaa
gagactttgctcaaagaggctggtgttaaaaacgcaaacccgcggaagagaaagaaacag
agtctaaaactgggacatggagggactctagacagtgctgccagtggggtattggttgtt
ggtgttggaacaggcacaaaaacactcagtaccatgttagccggttcaaagaaatatgtt
gctgtgggtgaactgggcaaagcaacagacacacttgatgctactggcaaagtgactctg
gagaaagacttcgatcacatcaccagggtggacatggaggagaagctgaagtccttcact
ggtgacatcatgcaagttcctccactctactcggctctgaagaaggacggccagcgtctg
tctgtcctgctgaagcaaggtcacaaggtcgaggccaaacctgccagaccagtgactgtg
tacaacctgaccctgcaggagttcaagcctcctctgttcactctggatattgagtgtggt
ggtggattttacgtcagaagcttggtggatgacctgggaaaggctctgtcgtcctgtgct
cacgtgaagacgctggtgcggaccaagcagggtcagtttaccctggaggagcatgctttg
cctgaggagaagtggacactggaacatattgtgtgctctatgcagccctgctctgtatca
gagcagagcacaaaaccatcagaccaaccagcagagaaaacatcagaccaaccagcagag
aaaccatcagaccaaccagcagagaaaatatcagaccaaccagcagagaaaatgtcagac
caaccagtagaggaactatcagaggaaccatcagagaaaaacagtgtgaaccacgttgaa
aacaagacatga
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