Solea solea (common sole): 131448709
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Entry
131448709 CDS
T10853
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131448709 (msh2)
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NCBI-GeneID:
131448709
NCBI-ProteinID:
XP_058477370
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Position
21:11606600..11622677
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AA seq
934 aa
AA seq
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MAVQPKQNLSMDSAAESGFLNFIFSMPEKPDTTFRVFDRNDYYTVHGKDATFAAKEVFKT
NAVIKQLGSGSRKLESVILSKLNFEAFVKDLLLVRQYRVEVYRNHGKSSKDHDWRIEFKA
SPGNLTQFEEILFGGGTGAESCAGVVAVRATTAGDGQRVVGVGYVDAAQRSMGVCEFPDN
EIFSNLESLLVQLGPKECLLAQGEGSADSKLRQVVERGGLLVSDRKRAEFSSKDMVQDLN
RLLRSKRGETAASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLDLGQYMRL
DNAAVRALNLFQASPDESSRAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKPKIEERLDL
VESFVCDSELRHTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVNQIPALITALE
SYSGSYQVLLEAAFISPLRDLQADFTKYQEMIETTLDMNQIDHHEYLVKASFDAVLSELR
EKMDELDKSMQTVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKAEKGLRNNKKFTML
DVQKNGVRFTNSKLSSLNEEYIKSREEYEEAQNAIVKEIITIASGYVDPLQSLSGVIAHL
DAVASFAVTSVSAPVPYVRPRLLNDGCRRVELLQARHPCMENDPDTSFIPNDISFTQGEK
NFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVFDSILARVGAGDSQLKGV
STFMSEMLEIAAILRSATETSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCLFAT
HFHELTALTAQESTVHNLHVTALTSHDTLTMLYRVKAGVCDQSFGIHVAELASFPPWVVA
AAKEKAEELEEFQEPAGEKSSQEEEPEAKRRRTDKQVGEDLIQDFLDKAKSLPAASMTEE
EVKAELRRMKQELVAKNNTYISDIIARCRPLNSA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaagcaaaacctttccatggacagtgcagccgagagtggcttctta
aacttcatcttctccatgccggagaaaccagacaccactttcagagtattcgaccgcaac
gactactacactgtccacggcaaagacgccacatttgcggcgaaggaagtgttcaagact
aatgccgtcatcaaacagttgggctcagggagtcgcaagctggagagtgtcatcctgagc
aagctgaactttgaggcctttgtcaaagacttgctgctggtgaggcagtacagggttgag
gtgtacaggaaccacggcaagagtagcaaggatcatgattggaggattgagttcaaggcc
tccccaggaaacctaactcagtttgaggagattctgtttggtgggggaactggagcagag
agctgtgcaggagtcgtcgctgtgcgtgccactacagcaggtgacggacagcgcgtggtc
ggtgtcggctacgtcgacgcagcacagaggtcgatgggagtgtgcgagtttccagacaat
gagatcttctccaacctggagtccctgctcgtccaactcggccccaaagagtgtctcttg
gctcagggtgaaggcagcgctgacagtaaactacgacaggtggtggagcgcggcggcctg
ctggtctctgacaggaagagggcagagttcagtagcaaggacatggtgcaggatctcaac
cggctattgagatccaagagaggagagactgctgccagcaacacgctaccagagctggac
aaacaggtggctatgtcatgcttggccgctgtcgtgcgcttcctcgaactgctctctgac
gagtccaacttcaactccttcagcctgacgacgctggacctgggtcagtacatgaggctg
gacaacgccgcagtgagggctcttaacctcttccaggcttctcctgatgagagcagcaga
gcacattcattggctggtctgttgaacaagtgccgtacaccccagggtcagcggctggtc
aaccagtggatcaaacaacccctcatggacaaacccaaaatagaggagaggctggacctt
gtcgagagcttcgtgtgtgactcggagctcaggcacacctgtcaggaggacctgctgcgg
cggtttcccgatcttcaccgcctggccaagaagttccaccgtcacagtgcaacactgcag
gactgttaccgcgtctaccaggccgtgaaccagatccctgccctcatcacggctttagag
agctactcgggcagctaccaggttctgttggaggcagcgttcatttcccctctcagagac
ctgcaggctgatttcaccaagtaccaggaaatgattgaaaccactctggacatgaaccag
attgaccaccacgagtacctggtgaaggcttcgtttgacgccgtgctgagtgagctgaga
gaaaagatggatgagctggacaagagcatgcagacggtgctgaacagtgcagccagagag
ctaggtctagatgctggtaaaacggtgaagttggagtcgaacgccatgctgggtttttat
ctgagagtcacctgcaaggcagagaaaggtctgaggaacaacaagaaattcaccatgctg
gacgttcagaagaacggagtgcgtttcacaaacagtaaactgagttcactgaacgaggag
tacatcaagagcagggaggagtatgaggaggcccagaacgcgatcgttaaagagatcatc
accattgcctcaggttacgtggaccccctccagtcgctgagcggtgtgatagcgcacctg
gacgcggtggcgagttttgccgtcacgtccgtctcggctcctgtgccgtacgtccggcct
cgcctcttgaatgacggctgcaggcgcgtggagctgctgcaggccagacatccctgcatg
gagaatgacccagacaccagcttcatacccaacgacatcagcttcacccagggagagaag
aacttctatatcataacgggaccaaatatgggcggcaagtcgacatttatccggcaggtg
ggtgtgatcgcgctgatggcacagattggctgctttgtgccgtgcgagaaggcggagctt
agtgtgtttgatagcatcctggccagggtgggagccggggacagtcagttgaaaggcgtg
tccaccttcatgtcagagatgttggaaatcgccgccattctacgctcggccacagagacg
tcgctgatcataatcgacgagcttggcagaggcacatccacgtacgatggcttcggtctg
gcttgggccatcagtgaacacatcgcctccaagatcagctgcttctgcctttttgccacg
cacttccacgagctgactgcactgacagcacaagaatccacggtccacaacctgcacgtc
acggccctgacctcccatgacacgctgaccatgctgtacagagtcaaagcaggagtgtgt
gaccagagttttggtattcacgttgccgaattggcttctttcccaccatgggtggttgcc
gcggcaaaggagaaggcagaggaactggaggagttccaggaaccggcaggggagaagtcg
tcgcaggaggaagagcctgaagccaagagacggcgaactgacaaacaagtgggagaagac
ctgatccaggacttcctggacaaagccaagtcacttcctgctgcgagtatgactgaggag
gaggtgaaggcagagctcaggagaatgaagcaggagctcgtcgccaaaaacaacacgtac
atctcagacatcattgctcgctgtcgccctttaaattcagcctga
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