Solea solea (common sole): 131448835
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Entry
131448835 CDS
T10853
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03013
Nucleocytoplasmic transport
ssoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131448835
03015 mRNA surveillance pathway
131448835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131448835
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131448835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_ACIN1
RRM_3
RRM_occluded
RRM_MUD2_C
RRM_5
RBD_AKAP-17A
Nup35_RRM_2
RAP1
Motif
Other DBs
NCBI-GeneID:
131448835
NCBI-ProteinID:
XP_058477607
LinkDB
All DBs
Position
21:6181176..6185371
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AA seq
275 aa
AA seq
DB search
MAPSPTKRKEDDKSKQRGKEKSGTTKEGADKDRGRDKNRTRRSASTGSSRSSSSSSSSSG
SSSGSSSGSSSSASSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRD
RRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPMNRVHPHLSKGYAYVEF
ETHDEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPRM
RRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttccccgacaaagagaaaggaggatgacaagagtaaacagcgaggcaaggag
aagtcaggaaccacgaaagaaggtgctgacaaagaccggggccgtgacaagaaccgcaca
cggcgcagtgcctccactgggagcagcaggtccagctccagctccagcagcagctcaggc
tccagctccggatcgtccagcggctccagctcctcggcctccagccactcgggctcgtcc
agctcccgctcctcttcctcctcctcctcgtcttcttcaccgagccccagccgccagcgc
cacaacaacagacggcgttcacgctcaaagtcaaaatcggcaaagaaggatgacagggac
agaagacgcaggagccccacacccaaacccaccaaggtctacctgggccggctgacgaga
aacgtcatcaaggaacacatccaggagatcttctccacctacggcaagatcaagatgatt
gacatgcccatgaaccgcgtccaccctcacctgtctaaaggctacgcgtatgtggagttt
gagactcacgacgaggcggagaaggccctgaaacacatggatggaggtcagattgacggt
caggagatcacagtcacagctgtgctgactcccaccgtgcgtccaccacctcgcaggctg
tctcctcctcgccggatgcctcctccacctccaatgtggcgacgcacgccgcctcgtatg
aggagaaggtctcggtctccgcggcgacgctctccagtgcggcgcaggtctcggtcccct
ggccgccggcgccaccggtcacgctccagttctaactcctcgcgctaa
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