Solea solea (common sole): 131449070
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Entry
131449070 CDS
T10853
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03420
Nucleotide excision repair
ssoe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
131449070 (ercc4)
03460 Fanconi anemia pathway
131449070 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoe03032
]
131449070 (ercc4)
03400 DNA repair and recombination proteins [BR:
ssoe03400
]
131449070 (ercc4)
DNA replication proteins [BR:
ssoe03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
131449070 (ercc4)
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
131449070 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
131449070
NCBI-ProteinID:
XP_058478013
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Position
21:complement(3438108..3443215)
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AA seq
897 aa
AA seq
DB search
MAGPLLEYETEMFLSVFGCDGLLVAAEGLGIDRILLQFMRVYSEQDSLVLLLNTTTPEQE
YLTEQLRVEGVAHLPRTVTSDVQSTERYNVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATALSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSSILDIMGACLKELKRYNPSLEVE
DLSLENTLGKAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKSFGSNSGWLFLDSSTSMFVNSRSRVYRFAESKKKLKVGSEAEKQKSSSASEV
KRDLVLEKSPKWEALTEVLQEIEKENKSSELEPGRVLICASDDRTCAQLQQYIRHGSDWL
LHRLYTRTIGKRDSAAAAALDLESHRKGNGWPKKGGKGKEPAQKKNTKSTKSKSRPSLTL
TQMVGKEETDEVAVLGSSGDDEELMEDDESEDEQMKLNLSSDAYYGVLKEPLTVIHPLKG
CTDPHSLTRVLHEVEPSFVVLYDAEVSFVRQLEIYKASRPGKALRVYFLIYGGSTEEQKY
LTALSKEKKAFEHLIREKATMVIPEEREGREDTNLDLARNLEPANATTNTRKAGGQEQPK
EPSRVIVDMREFRSELPSMLHRRGLDIEPVTLEVGDYILTPDICVERKSVSDLIGSLQSG
RLYTQCLSMTRYYKKPVLLIEFDPEKPFSLTARSDFRHEISSNDISSKLTLLTLHFPRLR
ILWCPSPHATADLFVELKKGRLEPDAAAAQAVTAESDTVAESAGLYNPGPYDFLLKMPGV
STKNYRSLIKNADSLADLTKLSQDKLAEILGNAHNAKSLYEFLHNVADVPAPVQKAK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgctcctggagtacgagacggagatgttcctgagtgtgttcggctgtgac
gggctgctggtggcggcggaggggcttgggatagaccgcatactactgcagttcatgcgg
gtttactccgagcaggacagcctggtgcttctgctcaacacaactacacccgaacaggaa
tatctgacagagcagttgcgtgtggagggtgtggcccacctgcccaggacagtgaccagt
gatgtccagagcacagagcgttataatgtttacaccgaaggaggagtgctgtttgtcacc
agcagaatcctggtggtggacttcctcactgaccgcattccggctcatctcatatcaggc
atcctggtgtatcgtgcccataaaatcatcgagtcttgtcaggaggctttcatcctacgc
ctgttcagacaaaagaacaagactggtttcattaaggccttcactgacaaggccacagcc
ctctcctcaggcttctgtcaggtggagcgtgtgatgaggaacctctttgtcaagaagctc
tacctgtggcccaggttccaagcatcagtgaacacagcactggacaggcataagccagag
gtggtggagcttcatgtgtcactgacgccagctatgagggccatccagagctccatcctg
gacattatgggtgcctgtctgaaggagctgaaacgctacaacccgtctctggaggttgag
gacctctcattggaaaacacactaggaaaggcttttgaaaagaccattcgtcactatctg
gaccccctgtggcatcagcttggagctaagaccaaggcactggtccaggacttgaaggta
ctccgtgttcttctgctttacctcacccagtatgactgtgtcaccttcctcaatctcctt
gagtcactgcgctccagccaaaagagctttggctccaattcaggctggctgttccttgac
tccagcacctccatgtttgtgaactccaggagtcgagtgtaccgcttcgctgagagcaag
aagaaactcaaagtgggatcagaggctgagaaacagaagtcatcttctgcctcagaggtg
aaacgagacctggtgctggagaaaagcccaaagtgggaggcgctgactgaggttctgcag
gagattgagaaggagaacaagagctcagaacttgaaccaggtcgtgtgctgatctgtgcc
agtgatgaccgtacttgtgcccagctgcagcagtacatcaggcacggctcagattggctg
ctgcacagattatatactcgcacgattggcaaacgggactccgctgctgctgctgccttg
gaccttgagtcacacagaaaaggaaatggttggcccaaaaaaggaggcaaggggaaggag
cccgcacagaagaaaaacacaaaatccaccaagagtaaaagcagaccgtctctgaccctg
acccagatggtcgggaaggaggagactgacgaagttgccgtgttgggcagcagcggagat
gacgaagaactgatggaggacgatgaaagcgaggacgaacagatgaagttgaatttgtcc
tctgatgcttactatggtgtgctgaaggagcctctgactgttatccacccgctgaaaggc
tgcaccgacccccatagcttgacacgggttctgcacgaggttgaacccagttttgtggtg
ctgtacgacgctgaagtgagttttgttcgacagctggagatctacaaagccagccggcct
gggaaggcactccgggtttatttcctcatttatggaggctcgacagaagaacagaagtac
ttgacagcactctctaaggaaaagaaagcctttgaacacctcatcagggaaaaagctact
atggtcataccagaggagagggagggacgagaagacaccaacctcgatcttgctcgaaat
ttagagccagccaatgcaactaccaacacccgcaaagcaggaggccaggagcagccgaaa
gagccttcgcgagtcattgtagacatgcgtgagttccgcagcgaacttccctccatgctg
catcgccgtggactggacatcgaaccggtcaccctagaagtaggtgactacatcctcacg
ccagacatatgcgtggagcgcaagagcgtcagcgatctgatcggctctctgcagagcggc
cgcctctacacccagtgtctctccatgacccgctactacaagaaaccagtgctgctcatt
gagtttgacccagagaaaccgttctccttgacggcccgatcagacttccggcacgagata
tcatccaatgacatttcttcaaaactcactcttctcacgttgcattttccccggctgcga
atactctggtgcccctccccacatgctacggcggacctttttgtagagctgaagaaaggc
cgcctcgaacccgacgccgccgcagctcaggcggtcacggctgagtcggacacggtggct
gaatcagcaggcctctataaccccggaccttatgactttctgttaaaaatgcctggggtc
agcacaaaaaactacaggtccttgataaaaaacgcagacagtctggcggatttaaccaaa
ctcagccaggacaaacttgcagaaatacttggaaatgctcacaatgctaagtcactgtat
gagtttctgcacaatgttgcagatgttcctgctcctgtgcaaaaggccaaataa
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