Solea solea (common sole): 131452997
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Entry
131452997 CDS
T10853
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04136
Autophagy - other
ssoe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131452997 (atg13)
04136 Autophagy - other
131452997 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131452997 (atg13)
03029 Mitochondrial biogenesis [BR:
ssoe03029
]
131452997 (atg13)
Membrane trafficking [BR:
ssoe04131
]
Autophagy
Autophagosome formation proteins
ULK complex
131452997 (atg13)
Atg1 complex
131452997 (atg13)
Mitochondrial biogenesis [BR:
ssoe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131452997 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
131452997
NCBI-ProteinID:
XP_058478417
LinkDB
All DBs
Position
2:complement(16877640..16891865)
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AA seq
535 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTLEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHNYVILYRIYFGEVQLSGLGEGFQTVRVGVVSTPV
GTLTLSCAYRTNLAFMSNRQFDRSAPIMGIIVDHFVDPPCSNQRPANMGHPCNYRAPDEE
DGSPFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHTL
YSSRLYYQPSAELCHPAANPNQALHAGKEGGVASAPVQPHGADAHLTVEHTPNTPGSSGD
DDGLSQSGEKKRDGGRRSDSPADPVESLNEFTRKVGAFVNKPSTEITAASLDLPFAAFAP
RGLESEEDDLMVQPPASPPCPSPLQASLHSQGSEGSGQQDDFVMVDFKPAFSKDDLLPMD
LGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLALYEKNIDEFDAFVDMLH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctaagtccccaggataaaaaggacttggacaagttcattaagttcttt
gctttgaagactgttcaggtaatcgtccaagcccggcttggagagaaaatctgcactcgc
tcttcctcatcacctacaggctctgactggtttaatttggccatcaaagacatacctgag
gttactcttgaagccaagaaagcactggctggacaactcccaggcatcggtcgctccatg
tgtgttgagatctccctgaagacatcagagggggattcaatggaattagagacatggtgt
ctggaaatgaatgaaaagtgcgataaggatatcaaggtgtcatacactgtctacaaccgt
ctgtctgtccttctcaagtctctgctggccatcaccagagtgacaccagcctataagctg
tccagaaagcagggacacaactatgttatattatacaggatctactttggggaagtgcag
ctcagtggattaggagaaggttttcagacagtgcgtgtcggcgtcgtcagcacccctgtc
ggcacactcacactctcatgtgcctaccgcaccaacctggcattcatgtctaacaggcag
tttgatcgatcggctcctatcatgggaatcatcgtggatcactttgtggatcctccgtgc
agcaaccagcgtcctgcaaacatggggcatccctgcaactacagagctccagatgaggag
gacggaagcccatttgcaggagttcaggattcacaggaggtctgcaccacctcattctcc
acctcccctccctctcagtgtgtgtgcacactgagtccgtctccctctaaactgtctaag
cccctccccctggacagtctgcagcttccattggctcctggacttgtcactcacactctt
tattcatccagattatactaccagccttctgctgagctctgtcaccctgctgctaatcca
aaccaggcattgcatgctgggaaagagggtggggttgcatcggctcccgtccagccacat
ggagcagatgcccatctgacagtagaacacacccccaatacacctggcagcagtggtgat
gatgatggtctgtcacagagtggagaaaaaaagagggacggagggaggaggagcgattct
cccgctgacccagtggagtctctcaatgagttcacaaggaaagtgggagcctttgtcaat
aaacccagtacagagataactgcagccagtctggacctgccatttgctgcgtttgctcct
cgaggcttggagtcagaggaggatgacctaatggtgcagcctccagcctcccctccctgt
ccatccccgctgcaggccagccttcactctcaaggctcagaaggatcggggcaacaggac
gattttgtcatggtggactttaaacctgccttttctaaagacgacttgctgccaatggat
ctgggcaccttctacagagagtttcagaaccccccacagctggcaagcctctcactacac
atcagctcccagtccatggccgacgacctggactccctgccagagaaactggccctctac
gagaaaaacatcgacgagtttgacgcttttgtggacatgctccattaa
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