Solea solea (common sole): 131455360
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Entry
131455360 CDS
T10853
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131455360 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131455360 (prpf38b)
Spliceosome [BR:
ssoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131455360 (prpf38b)
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Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
131455360
NCBI-ProteinID:
XP_058478927
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Position
1:10753716..10759991
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AA seq
478 aa
AA seq
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MASVGNQLPTQAVSKSAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQLMGLITHTDSPYIRALGFMYIRYTQPPNDLIDWYDGFLDDEEELDVKAGAGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKSIDQQMKARPRKIVQKEEVQEEEEEEEEEEEEEGA
PPAAAATFADPGKQGERWRSRTPRRTPSPRKSPKRSRSKSHQRERERHGPSFDRELERER
DRQKKERDGRDRDRDRERRRSRSADRNHERRERRKSRSGSRERRGERRDKERDGGEDRNK
RKDREHHKDRGTERERSRDKKSRGETDDRRHKDDRERHREERKAKKTSRSQSKERKHKSG
EEKNRKRERSHSRDRDRDRDGERRSHKRSHSKDKSHHQRETSNDHSKHSERRRSHSTE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgtcggaaaccagctgccaacacaggccgttagcaagtctgcgccagggaaa
catggaaatgtactgcccctgtggggcaacgaaaagactatgaacctcaatcccatgatt
ctaaccaacgtgctgtcctctccgtatttcaaagtccagctttacgaactgaagacctac
catgaagttgtggacgaaatctatttcaaggtgaatcacgttgagccttgggaaaaggga
agcagaaagactgcaggccagactggaatgtgcggaggggtgcggggagttggaactggt
ggtattgtgtctactgctttctgtcttctatacaaactgtttactctcaagttgactcgc
aagcagctgatgggtctgatcactcacacagactcaccgtacatcagagcacttggcttc
atgtacataaggtacactcagcccccaaatgatttaattgactggtacgatgggttcctg
gatgatgaggaggagcttgatgtaaaggcaggagctggttgtgtgatgaccataggagag
atgctgcgctcattcctaaccaagctggagtggttctctactcttttcccccggattccc
gtacctgtgcagaagagtattgaccagcagatgaaggcgaggccacgtaagattgttcag
aaggaggaggtgcaggaagaggaggaggaggaggaggaggaagaagaagaagaaggagca
ccaccagcagcagcagccacatttgcagatccgggaaagcaaggggaacgatggcgctcc
aggacacccagacgaacgccaagcccacgaaagtcgcccaaacggtcaaggagcaagagc
caccagcgtgagcgcgagcgtcacggccccagctttgaccgagagctggagagggagcgt
gatcgccaaaagaaggagcgagacggcagggaccgagatagggacagagagagacggcga
tcccgcagcgcagacagaaaccacgagcgacgagaacgtagaaaaagccgcagtggcagc
cgagaacgaagaggcgaacgcagagacaaagagagagatggaggggaagacagaaacaag
aggaaggacagggagcaccataaggatagaggcacagaaagagagaggtccagggataag
aagagcaggggagaaactgatgacaggaggcacaaggatgacagggagaggcacagagaa
gagaggaaggccaaaaagacgagtcggagtcaaagcaaggaaaggaagcacaagagtgga
gaggagaagaacaggaaaagagagcgcagccacagcagagatagagacagggacagagat
ggggaacggcgttctcacaaacgtagtcatagcaaagacaagagtcatcaccagcgcgag
accagtaatgatcatagtaaacatagtgaacgcagaaggagtcacagcactgagtaa
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