Solea solea (common sole): 131455557
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Entry
131455557 CDS
T10853
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
131455557 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131455557 (runx1)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
131455557 (runx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
131455557
NCBI-ProteinID:
XP_058479251
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All DBs
Position
2:8819295..8874970
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AA seq
514 aa
AA seq
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MSCCRVCTKDWSMNPGALSSSGPLSWAMYLMRKGRSGSGVFDPAPGRRYTPPSTTLASGG
KMAEALPLGAQEAGGGASLLGKLRMADRGMVEVISDHPGELVKTDSPNFLCSVLPTHWRC
NKTLPIAFKVVALGEIADGTLVTVMAGNDENYSAELRNATAAIKNQVARFNDLRFVGRSG
RGKSFTLTITVFTNPPQVATYQRAIKITVDGPREPRRHRQKMDEVKPGSLAFSERLTELE
QLRRSSMRVTPPHHHHHQTSANARQSAALNSATFSSPTHSQITADSRQMQSSPSWSYDQS
YPYLGQITTPTVHTANPLSPGRSSLSDLSSRLTGPDLTAFGDPRMALERSFSSLPSLPDS
RFPDPRVHYPPTAAAFTYTPSHNPVSNGALGITMATAMATTPGGRYHTYLPPPYPANTPH
QTQNGPFQSTSSPYHLYYSAAGSYQFSMMAGGGGSSDSRSPPRILPPCTNASTGSALLHP
SLPNQNEGVGVEVESSHSSSPTNMAAAEAVWRPY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagctgttgccgcgtctgcaccaaggactggagcatgaaccctggggcgctctccagc
tcaggccccctctcctgggccatgtacctgatgaggaaaggccggtcaggcagcggagtc
tttgacccagcccctggccggcgttacactcccccctccaccacgctcgcctccgggggg
aagatggcagaggccctgcctctcggggcgcaggaggccggcggtggagcgtctctgctg
ggcaagctgcgcatggcagaccgtggcatggtagaggtgatctcagatcatccaggcgag
ctggtgaagacggacagtcccaacttcctctgctctgtgctgccgacacactggaggtgt
aacaagactctgcccatcgcttttaaggtcgtcgccctgggtgaaatcgctgacggcacc
ctggtgacggtgatggcgggaaatgatgagaattactcggcagagctccgcaacgccacg
gctgccatcaagaaccaggtggcccgattcaacgacctgcgctttgtcggccgcagtgga
agagggaagagtttcactctgaccatcaccgtcttcaccaaccctcctcaagtggccacc
taccaaagagcaattaaaattacagtggatggtccgagagagccacggcgtcatcgtcaa
aagatggacgaggtcaaaccgggctctctggcgttctctgagaggctaacagagctggag
cagctgagacggagctcgatgagggtgacacctcctcaccatcatcaccatcaaacctcg
gccaacgcccgccaatctgcagcactcaactccgccacattctccagtcccacacactct
cagataactgctgattcaagacagatgcagtcgtctccgtcttggtcctacgaccaatcg
tatccctaccttggccaaataaccacgcccaccgtccacacagccaaccccctatcgcct
ggtcgctcctctctcagtgacttgtcctcacgtctcacaggtcctgacctcacggccttt
ggtgaccccagaatggccttggaacgatccttctcctctctcccctcattgcccgactcc
cgcttcccggaccctcgcgtccactacccccccacagcggctgccttcacctacactccc
tctcacaaccctgtctccaacggcgcccttggcatcactatggcaacagccatggcgacc
acgccgggagggagataccacacctacctgcctcctccctaccctgcgaacaccccgcac
cagactcagaatggacctttccagtccacctcctcaccatatcacctgtactactctgct
gccggatcgtaccagttctccatgatggccggagggggaggcagcagtgactcgcgctcc
cctcccaggatcctgccgccgtgcaccaacgcttcaacaggctccgccctcctgcacccc
tccttgcccaatcagaatgaaggagtgggtgtcgaggtggagtccagccacagtagctcc
ccgacgaacatggccgctgctgaggccgtgtggagaccttactga
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