Solea solea (common sole): 131455605
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Entry
131455605 CDS
T10853
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131455605 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131455605 (bard1)
04121 Ubiquitin system [BR:
ssoe04121
]
131455605 (bard1)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131455605 (bard1)
03400 DNA repair and recombination proteins [BR:
ssoe03400
]
131455605 (bard1)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131455605 (bard1)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131455605 (bard1)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131455605 (bard1)
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
131455605 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_3
Ank_4
Ank_5
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
zf-RING_10
ANK_LRRK2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
131455605
NCBI-ProteinID:
XP_058479329
LinkDB
All DBs
Position
2:27346557..27366192
Genome browser
AA seq
800 aa
AA seq
DB search
MDNDVVTQTDDWRNTKEAAARFRQLLLCSKCSNLMSEPVCLGMCEHMLCRSCAGPQAGDG
CVVCHSPAWVKDIQINRQLSSIIQLFCGLESLLNPMDQADSSVAEIHSQPESPILKHKKS
VKIWFSPRSRKVRCTVEKSSEVTLPDSRSSGETAAAQPDTITAQQQDLSVFNFTSSSQDS
GSSSQRCNSGNTQRTKRSTKKKAASRKAKVQGPTRTTQRPTKQKIKKQERLETINKQWGI
SEEEDALKGMEQHCAEGTKRSSKRVSFQSPTVIADEPQPEVPQENTNDLSSGRSTMMESP
TGASTTEINYQASADQSMSDSVIQQKTPSADDLEPNGDPEKQGNVSPLKRSAKRTTVAEK
HGNLETTPKRPRASPGGRRKSPGGISPVVHNPRLLTSPRDGKSNKICRGEQSPSFGRKSL
SPLGRPSTGSPAVMKRNHKGETLLHLAAIKGDVEAVKQLLDQGADPNLKDNAGWTPLHEA
CNLGHIAVVEALISNGALLNTPGYENDSPLHDAVRNGHSAIVKLLLQLGASQNVLNLYGK
RPADCAASLEMMKIFREATEGTQNANASFSPSASLSVMSDCVRSNEMVVFLPSKLPRPAQ
VQLDKLGQLMGGRRADTFSGSVSHVVVPEGHMPTTYSTLLGILAGCWVVRFSWVAACLQA
GDWMPETEHEAGEGPQRSRINRLSLLPPLFDGCFFFLLGSFKAPTKDELTKLLREGGGQL
LSRKPKPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDPQGPHKPRVVRRGKVWSAPSTW
IIECIAAFQLLPVPEPQTLV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggataacgatgtcgtcacgcagacggacgactggaggaacactaaagaggctgctgcg
aggtttcgccagctgctgctttgctcgaaatgctcgaatttaatgagtgaaccagtgtgt
ctgggtatgtgtgaacatatgctgtgcaggtcctgtgctggcccccaggcaggagatggc
tgcgtcgtgtgtcacagccctgcgtgggtgaaggacattcaaatcaacaggcagctgagc
agcattatacagctcttctgtggtttggagtccctactcaatcccatggaccaagcagat
tcctctgtggctgagatccattcgcaacccgagagcccaatcttgaaacacaagaaaagc
gtcaagatttggtttagcccccgcagtcgaaaggtacgctgcacagtggagaaatcttca
gaggtcaccttaccagacagcaggtcttctggagaaacagctgctgcacagccagacacc
attactgctcaacaacaggacctgtcagttttcaatttcacctcatcctctcaagactct
ggctcttcttctcaaagatgcaacagtgggaacacacagcggacgaagaggtcaacaaaa
aaaaaggctgccagcaggaaggccaaggtgcaaggacccactcggaccacacaaaggccg
accaaacagaagataaagaagcaggagaggctggagaccataaataagcaatggggaatc
tccgaggaagaagatgccttaaagggaatggagcagcactgtgcagaagggacaaagagg
tcgagtaaaagggtttcattccaaagccctactgtcatcgctgacgagcctcagcctgaa
gtgccacaggagaatacgaatgacctcagctctggcaggagcaccatgatggaaagcccc
actggagccagcaccactgaaataaattaccaagcatcagctgatcaaagcatgtcagac
agtgtcatccagcaaaagacgccgtctgcggatgacctcgagccaaacggtgatcctgaa
aaacagggcaatgtttctcccttaaagcgttccgcaaaaagaactacggtggcagagaaa
cacggcaacctggagaccacaccaaaaagaccaagggcttcccctggtggaaggagaaaa
tctccaggtgggatatcgcctgtggtccataaccctcgattgttgactagtcccagagat
ggaaagagcaacaaaatatgcagaggagagcagagcccctcatttggtagaaaatccctc
tcccctctcggaagacccagcacaggaagtcctgcagttatgaagaggaaccacaagggc
gagaccctcctgcatctagctgcgataaagggagatgtagaagctgtcaaacaactgctg
gaccagggagcagaccccaacctgaaggacaatgctgggtggaccccgctgcatgaggca
tgtaacctgggtcacatagcagttgtagaggcattgatctcaaacggagccctgttgaac
acgcctggctatgaaaatgactctcctctgcatgatgccgtaaggaatggacattcagcc
atcgtcaaactgttgctgcagctgggagcctctcagaatgtgcttaatctgtatggaaaa
cgtcctgcagactgtgcagcgagtcttgagatgatgaagattttccgagaagccacagag
ggaacccaaaatgcaaatgcttcttttagcccctcagccagtctctctgtgatgagtgac
tgtgtgaggagtaatgaaatggtggtgttcctgcccagcaagttgcctcggccagcccag
gttcaactggacaaactggggcagctaatgggaggaagaagggctgacaccttttctggt
tcagtgagccacgttgtggtgccagaaggacacatgcccaccacctactccaccctcctg
ggtattcttgctggctgctgggttgtcagattcagctgggtggcggcgtgtctgcaggca
ggcgattggatgcccgaaacagagcatgaagcgggtgaaggtccccagcgtagtcgcatc
aacagattgagcttgcttcctccactcttcgatggctgtttcttcttcctcctgggctcc
tttaaggctcctaccaaggacgagctcactaagctgctacgagagggtggaggtcaactc
ctgagccgaaagcctaagcctgacagtgatgtgacacaaaccctgagtgctgctgcctat
catgccctgccaggttctgaccaggccctctgcacccagtacatcatttttgacccccag
ggtccccacaaacccagagtggtcagacgaggcaaggtatggtccgcaccctccacatgg
attattgaatgcatcgcagccttccagctcctccctgtaccagaaccacaaacactggtc
taa
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