Solea solea (common sole): 131456399
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Entry
131456399 CDS
T10853
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131456399 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131456399 (sf1)
Spliceosome [BR:
ssoe03041
]
Complex A
Other components
Complex A specific factors
131456399 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
131456399
NCBI-ProteinID:
XP_058480672
LinkDB
All DBs
Position
3:6283485..6293577
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AA seq
675 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGSGNGLMPTPGPPASFPAIQAFQPAMPNVAFPQ
FSPVTGISAPSPQPPVVVGGLGKPDFGQKKSRKKSRWSSETPDQKTVIPGMPTVIPPGLT
RDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKI
EEERHSLITEMVGLNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTLK
NIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNI
LKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKCGGA
GHISSDCKYTSTFAAHRTTGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSGGGHSGQG
GAPRGSGHNSNQSPMQNRPPWMSSGHNENRNYHSVQAGPGGHGAPHSFPPPMSSMGGPPM
PPNPNGLPPPWMQPPPPPMSQGPGPHGHPMGLLPPPMSMMPPPPPPPSSQPPPPPSGPLP
PWQQQAPPPPPTSSMATSTPLPWQQNTTTTSSPATATLPPWQQPQQSAASGAQPPPPMGQ
PSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGMMYAPPPPPPPMDPSNFVTMMGMGVPGMP
PFAMPPAPPPPPPQS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggagcaaatgcaacccctttggggaagttgcaccccagcattggcgctaaa
cgaggatttgacgccgggcctggctcgggcaacggcttgatgccaacaccggggccgcca
gcatccttccctgcaattcaagctttccagcctgcgatgccaaacgtagcttttccgcaa
ttcagcccagtgacgggtatttccgccccgtctccacagccaccggtggtggttggcgga
ctagggaaaccagattttggtcagaagaaatcgagaaagaagagccgctggagcagtgag
acgcctgaccagaagacggtcatcccgggaatgcccacagttattcctcctggattgacc
cgggaccaggaaagagcctatatagtccaactgcagattgaagacctgactcgtaaactg
cgtacaggagacctgggaatccctgttaaccctgaggacaggtccccctctccagagcca
atctacaacagcgagggcaagaggttaaacacccgagagtaccgcacacggaagaagatc
gaggaggagcgtcactccctcatcactgagatggtcggactcaaccctgaatttaagcct
cccgcagactataagccacctgccaccagagtcaacgacaaagtgatgattccccaagat
gaataccctgaaatcaactttgttggtcttctaattggaccacgtggtaatacactgaag
aacattgagaaagagtgctgtgctaagatcatgatccgtggtaaaggttctgtgaaggag
ggcaaggttggccgaaaggatgggcagatgctcccaggggaagatgagcctctgcacgcc
ctggtcactgccaacacaatggagaacgtcaagaaagctgtggagcagatccgcaacatc
ctgaaacaaggcatagagacacccgaggatcagaatgacctacggaagatgcagctgagg
gaattggccagacttaatggcacactgagggaagatgacaacaggatccttcgtccttgg
caaaactctgagccacgcagcatcactaacaccaccctgtgcaccaagtgtggtggagcc
ggtcacatctcctctgactgcaagtacaccagcacatttgcagcccacagaacaacaggt
ggagaacctcctcagtcggcacaggacaaagctcgaatggataaggagtacctgtcactc
atggctgagctgggggaggctccagttcctacgtctggtggaggacacagtggccaggga
ggagccccccgtggctcgggccacaacagtaaccagtcacctatgcagaaccggcctccc
tggatgagctctggccataatgagaacaggaactaccatagtgtgcaagcagggcctggt
ggtcacggtgcaccccacagcttccctccaccaatgtccagcatgggaggccccccgatg
ccccccaaccccaatggactacctccaccctggatgcagccacctcctccccccatgagc
cagggtccaggacctcatggacacccgatgggtctgttgccaccgccgatgagtatgatg
ccccctccgcctcctcctcccagcagtcagccacctccccctccgtctggccctctaccg
ccatggcaacaacaggctcctcctccccctccaaccagcagcatggcaaccagtacaccg
ctgccatggcaacaaaataccaccaccacgtccagccctgccacagccaccctgcctcca
tggcagcagccccagcagtctgcagcctccggggcccagcccccaccacccatgggccaa
ccatccatggtgccgcctcctcccggtgtccagcccccgctgccccccggcgctcctccc
cctccaccaccacctcccccgggctcaacgggcatgatgtacgcaccgccaccacccccg
ccaccaatggacccctccaattttgtcaccatgatggggatgggggtgccaggcatgccc
cccttcgcaatgccccctgccccaccaccccctccaccccagagttaa
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