Solea solea (common sole): 131457775
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Entry
131457775 CDS
T10853
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131457775 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131457775 (chd8)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131457775 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
131457775
NCBI-ProteinID:
XP_058482374
LinkDB
All DBs
Position
1:5775766..5793623
Genome browser
AA seq
2585 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFSQVSSDPVEEALKLALGQVDPPTEPESTPELMVNA
GLSVPVAAPSISDPAPVQLPIQQSVPVATAQTVSIAAAPIMNPAPADTVPQIQAQTNIPI
ASNTTAVSSSTILLSSPLTVSSSPATTTATTTQLTQITHQLTHQLTPQQLAAIAQQAGGK
IVILKGPQGQAQVLQTVSGATTQTSGKVIRVLSGGPLKPGMSILQGGTVLNQASPGQAQV
KGGGVQRLLQSPNGPVKQLLLTSMPQQTQGQIQVQIPAQAQMVHGQTQVQVQPQAQATQI
QVQAQGQAAQIQGQTTQIQVQAQTQVQLQPAMQAHGAEGKRITLVLQQPSQSGSAASVGQ
AVSAQQQVTGGQQQQTPTRLVLGQLPGGKLVLQGSQLAALTQARAAGQAGGQPKVLTIQL
QVQQQPNQQGGVKYQLISGAGNAGNPQVLQISQGQGGQRVAVPIKMLLQPQTTVVSSAGG
TVSVVKVINTSAAGPSTTTTTSSQAIRITKAPGEPASVRRVEILCKQEKANRIVAEAIAR
AKARGEKNLPRVLNQDELPSTQTSPEIGGTITVVSAPKKKNSGGSKKKSPVAGGATPKPV
GGADKKSKVKTPGGTSGVAGGTVTPGTGSKSKSKTKTNTITLVGAKKRKRNASSDHSDGE
LSPASPATLEDDMIMKRRSNRVVKRKKYTEDLDIKITDDEDEQEDVDVTTTAAAVASISG
STAAQLKQEMELDGDGQPTMQFFVENPSEEDAAIVDKVLSMRLTKKEVCPGQYTTVEEFF
VKYKNYSYLHCEWASMQQLEKDKRIHQKIKRFKTKHAQMRHIFQEEEEPFNPDYIEADRI
LDVSHSVDKDNGEPVIYYLVKWCSLPYEDATWELKEDVDEGKVEEFGKLQNRQPRLKKMA
RPPASSWKKLEETREYKNGNILREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAL
LSEVYNVGIQGPFLVIAPLSTITNWEREFSTWTNMNAIVYHGSLASRQMIQQYEMYSKDD
KDHLIPGAYKFDALITTFEMVLSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMMDQ
EHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLRDFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSLGATSNSNVPNLLNTM
MELRKCCNHPYLINGAEEKIVAELRQVYDPMASDFHLQALIRSAGKLVLLDKLLPRLKAG
GHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC
TRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREML
DKASLKLGLDRAVLQSMSGNKESNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCE
EDIDQILQRRATTITIESEGKGSTFSKASFVASENRNDIALDDPEFWEKWAKKADIDMDT
INRKNTLVIDTPRVRKQTRQFSSLRGEGGDLSDLESDDEYPPANSRQSRSSRRADRHSGG
GYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVILVFCLLHYRGDEN
IKSFIWELITPPENGCGPTTLLNHSGLSIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPD
TLLLDESYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHADTVLKGAVIRELDIWMPEMEQQ
EVPAGWWDSEADRSLLSGVFKHGYEMYTTMRADPCLCFLERAGRPDDKAIDAEQHTGDTE
MGDDADYDKYSEDPEFKPASRHKDLFEETDSMNVDDEISVEERSGPLITENFLSLSGASN
WPSSSSLTARLRRLITAFQRSYRQEQLKIEAEAKGDRRRRRCEQASKLKEIARQERQQRW
TRREECDFYRVVSTFGVVKLKKEPDFPEAGDLEFDWIRFRTFARLDKKTDESLSRYFRSF
VAMCRRVCHLPGRDDSAENSQTVAPITEERASRTLYRISLLRRLRERVLPHPSLEERLTL
ALPNSELPSWWNIPDHDRELMLGADLHGVSRTELSILADPQFTFNQAREEFIQNQQAPPS
PPPPPQPLSIIPLIQPKTEDDLPDVKEEVADDEARLLGAELLADLQSTPLSHHDGKVQGQ
GWNFKKSRGRGGRTEGGTKGERGSDSDSDSDSGSSSSEQSGSSDESGESEEEGEKAAKVC
DMDEDNSLLSITASQDGIPPPDPIRVEWPKDRVLINRLDTLCTLVLTGQWPSGRRYVPEA
QLNPSSDLMGDEMAFTRLIRKPSSMTAGPGAEGEDGEFTVKLLKEEGLKLTFSKQALMPN
GSGESSNRKKRKDQELSDPEGLLDPLERTPRRRDPPTWLKENPDYEVEGDMLELLVNRSK
RKRRRRANKVLTGSEKVKVINMRTGKKVGAAFCPMLQDLREYLEENPDNAVAPDWSDTVR
SSGFLPETHFHRLLTDHSEIPKKSRRRHHHHHHHHHHHHTPEPVPEDPNLDGVEEETLVS
DGAYMMDEEDLETSHHFLTSPDFDVKMMGGDSISHGDYDSSDQEALLDDVIIAQKDSDSS
SSSED
NT seq
7758 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccatcatggacctttttgaggacactcctctgtttaacctggatgccctg
ccagatgactccttctctcaagtctcttcagaccctgtggaggaggctcttaagctggcg
ttgggccaagtggacccaccgactgagccggagtccactcctgaactcatggtcaatgct
ggcctcagtgttcctgtagcagccccctccatctcagaccctgcccctgttcaattacct
atacagcagtcagtgcccgtggcaactgcacagactgtttctatagctgcagctcccatt
atgaaccctgcccctgctgatactgtacctcaaatccaggcccagaccaacatacccatt
gccagcaacaccactgcggtgtccagcagcaccatcctgcttagctcacctctgactgtt
tcctcctccccagccaccactactgccacaacaacgcagctcacacagataactcaccag
ctaactcaccagcttactccccagcagttagctgccattgcacagcaggctggtggtaaa
attgttattctcaaagggccgcagggtcaagcccaggtgctgcagactgtatccggagcc
acaacccagacgagtggaaaggtgatccgtgtgttgtcgggtggtcctctcaaacctggc
atgtccatattgcaggggggtactgtcttgaatcaggcaagtccaggacaagctcaagta
aagggtggaggggtacagagattgctacaatctcccaatggtccagtgaaacagttgctg
cttacttccatgccacagcagacgcaaggacagattcaggtgcagattccagcccaagca
cagatggttcacggccagactcaagtccaagttcagccgcaggcccaggccacacaaatc
caggtacaggcccagggccaagctgcacagatccaaggccagacaactcaaatccaggtc
caggctcagacccaggtgcagctccagccagccatgcaggcccatggtgctgaaggaaaa
cggataaccctggttctccagcagccctctcagtctggctctgctgcctcagtgggtcag
gctgtttcagcccagcagcaggtcacagggggtcaacagcagcagacaccgactagactg
gtgttgggtcagctccctggaggcaaactggtgctccagggaagccagctggctgcacta
acccaggctcgggctgcaggtcaggccggagggcagcccaaagtcctcacaattcagcta
caggtgcagcagcagcccaaccaacaaggaggagtcaagtaccagctgatttcaggagca
ggaaatgctggtaacccacaggtgttgcagatctcacagggccaaggaggacaacgagtt
gcagtgccaatcaaaatgcttcttcagccacagacaaccgtggtatcttcagctggtggc
acggtctctgtggtgaaggtaataaacacatctgcagcaggcccctccaccaccaccacc
acttcgtcccaggccattcgcatcaccaaggccccaggcgagcctgcctcagttcgacga
gtagaaatcttgtgcaagcaggagaaggccaaccgtattgtggctgaggctatagcccgg
gccaaggcacgtggtgagaagaacctacccagagtcctgaatcaggatgagcttccatca
acccagacctctcccgagatagggggcaccataactgtggtgtctgctcctaagaaaaag
aacagtggcggaagcaagaagaaaagtcctgttgctggtggagcaacacccaaacctgta
ggaggagctgataaaaagagcaaagtgaagacaccgggaggaacatctggagtggctgga
ggaacagtaacacctgggacaggaagcaagagcaaaagcaaaactaagacaaacactatt
actctagtgggagcaaagaaaaggaagagaaatgcttcctcggaccattctgatggggag
ttgagtccggcctcacctgctacactggaagatgacatgattatgaagaggcgctccaat
cgtgtggtgaagaggaagaagtacacagaggacctggatatcaaaataacagatgatgag
gatgagcaggaagatgtagatgttactacgactgcagcagctgtcgcctccatcagtggc
agcacagcagcacagcttaaacaggaaatggagctggacggtgatgggcagcccaccatg
cagttctttgtggaaaatccaagtgaagaagatgctgcgattgtggacaaagttctttcc
atgaggttaaccaaaaaagaagtgtgcccaggccagtacaccactgttgaagaattcttt
gtgaaatacaagaactattcgtatttacactgtgaatgggccagcatgcaacagttggag
aaggataagaggatccaccagaagatcaagagattcaagactaaacacgcacaaatgaga
cacatcttccaagaggaggaggagccttttaatcctgactatattgaagcagacaggatc
ctagatgtgtcccatagtgtggacaaagacaacggagagcctgttatctactacctggtg
aagtggtgctccctgccttatgaagatgccacttgggagctgaaggaagatgtagacgag
ggcaaggttgaggagttcggcaaactccaaaaccgacaacctcgtctgaagaaaatggct
cggcctcctgctagttcgtggaagaaactggaagagactagagagtacaagaatgggaac
atactcagagagtaccaactggaaggagtcaactggctgctcttcaactggtacaacagg
cagaattgtatcctggcagacgagatgggtctgggcaagactatccagtccattgcactg
ctgtctgaggtgtataatgttggaatccaaggccccttccttgttattgctccactctcc
accatcactaactgggagagagagttctccacatggaccaacatgaacgccatcgtctac
catgggagcttggccagccgtcagatgatccagcagtatgagatgtacagcaaggacgac
aaggatcatttgattcctggtgcatacaagtttgatgccctcatcacaacctttgagatg
gtgttgtccgactgtcctgagctgagggaaatctcgtggcgttgtgtcatcattgatgag
gctcatcgcctcaagaatcgcaactgcaagcttttggacagcttgaagatgatggatcag
gaacacaaagtgttattgaccggcactcctcttcagaacactgtggaggaactcttcagt
ttactccatttcctggagccagctcagttcccctctgagacagagttcctcagagacttt
ggagacctgaaaacagaagaacaggttcagaagctacaggccatcttgaaacctatgatg
ttaagaaggctaaaggaggatgttgagaagaacttagcacccaaacaggagaccatcatt
gaggttgagttgactgatgtccagaagaagtattatcgagccatcttggaacgaaacttc
agtttcctcagtttaggggcaaccagtaacagcaatgtccctaacctgctcaacactatg
atggagctacgcaagtgctgcaaccacccctacctcatcaatggtgcagaggagaagata
gtagccgagctgcggcaggtttacgaccccatggcctcggacttccatttgcaggccctg
attcgctcagcaggcaagctggtgctgctagacaagctgctgcctcgcctaaaggctggt
ggccacaaagtgctgatcttctctcagatggtgcgctgcttagacattttggaggactac
ctcatcaacaaaagatacctttatgagcgtattgatggcagagtgcgtggaaacctgcgc
caggctgccatcgaccgctttagtaaacctgactcagaccgcttcgtcttcctgctgtgt
acccgagctggcggtttgggtattaacctcactgctgctgacacctgtgttatatttgac
tctgactggaaccctcaaaatgacctgcaggcccaagcaaggtgtcatcgtatcggtcaa
tcgaaggcagttaaagtctaccgcctgattaccaggaactcctatgagagggagatgctg
gataaagcaagtctgaagcttgggctggaccgtgccgtcctgcagagcatgagtggcaac
aaggagagtaacgtcaatgggatccagcagttctctaagaaggagatagaggacctcctg
agaaaaggagcgtatgccgccatcatggatgagaatgatgagggcagtcgcttttgtgag
gaggatattgatcagatccttcagcgaagagccaccaccattaccattgagagtgagggc
aagggctccaccttctccaaggccagctttgtcgcctccgaaaaccgcaatgacatcgcc
ctggacgaccctgaattttgggagaagtgggcaaagaaggccgacatagatatggacacc
atcaaccgcaagaacacccttgtgatagacactcccagagtacgcaagcagactcgacaa
ttttccagtttacgaggcgagggtggagacctgtctgatttggaaagcgatgatgagtat
ccacctgccaattccagacagtctcgttcttcccggcgcgctgaccgccatagtggagga
ggatacggccgcacagactgcttccgggtcgagaaacaccttcttgtctatggttgggga
cgttggagagacatcctgtcacatgctagatgtaagcgacgtttgagtgagcgggatgtt
gagacgatctgccgtgtcatcctggtcttttgtctgcttcactaccgcggagatgagaac
atcaagagcttcatctgggagctcatcactccgccggagaatgggtgtggaccaacaact
ctactcaaccactctggactgtctatccccgtaccaagaggcaggaagggtaaaagggta
aaggcccagagcacatttgatgttcagaaagtggagtggatccgaaagtacaaccctgac
actcttcttctggatgagagctaccgcaaacatctcaagcaccagtgcaacaaggtattg
ctcagggtgcgtatgctctactacctgaagcaggaagtgattggcgaacatgccgacacc
gttctgaaaggagctgtcataagggagcttgatatctggatgcctgagatggagcaacag
gaagtgccagcaggatggtgggattctgaggcagaccgctcactgctctctggtgtattc
aaacatggttatgaaatgtacaccaccatgcgtgctgatccctgcctctgcttcctggag
agagctggtcgacctgatgacaaggccatcgatgccgagcagcacactggtgacactgag
atgggggacgatgctgactatgataaatactcagaggacccagagttcaaaccggcctca
aggcacaaagatcttttcgaggagactgactcgatgaacgtggatgatgagatttctgtt
gaggaaaggtcggggccattgatcacagaaaacttcctgagcctgagtggtgcgagcaac
tggccctcaagctcatcactcacggcaaggttacgccggcttatcacggctttccaacgc
agctacagacaggagcagctgaagattgaagctgaggcaaagggcgaccgcaggcgcagg
cggtgtgaacaagccagtaaactgaaggagattgcacggcaggagcgccagcagagatgg
acacgtagagaggagtgtgacttctaccgtgtggtatcgacctttggtgtggtgaagttg
aaaaaggaaccagattttcctgaggccggagaccttgaatttgactggattcgctttcgc
acctttgctcgcctggataaaaaaactgacgagagtctcagccgatacttccgctctttt
gttgccatgtgtcggagggtttgccacctcccaggcagagacgattctgcagagaattcc
cagactgtggcccccatcactgaggagcgtgcttcccgtaccctttaccgtattagcctt
ttgcgtcgcctgcgtgagcgagtcctgccccacccctccctggaggagcgactaaccctg
gccctgccgaactccgagctgcccagttggtggaatataccagaccacgatcgtgagctg
atgcttggtgctgatctgcatggtgtcagccgcactgagctttccatattagcagaccca
cagttcaccttcaatcaggctagggaagagttcatccagaaccagcaggcccccccctct
cctccccctccaccgcaaccactttccatcatacccctcatccagcccaagactgaagat
gaccttcccgatgtaaaggaggaggtagctgatgacgaggcccggttgctaggtgctgaa
ctcttggctgacctgcagagcacacctttaagtcaccatgatggaaaagtacaaggccaa
ggctggaacttcaaaaagagcagggggaggggaggaagaacggaaggaggaacaaaggga
gagagaggatcggattcagattctgattctgattcaggctcctcgtcatcagagcaatca
gggagcagcgacgaaagcggggagagtgaggaagagggagaaaaggcagccaaggtgtgt
gatatggatgaagataatagtttactctccattactgcgtctcaggatggtattccacct
cctgatcctatcagagttgagtggcccaaggaccgtgtattgatcaacagactggacacc
ttgtgtacactggtgctgactggtcagtggccctcagggcggcggtatgtgcctgaggct
cagctcaacccgagctcagacctgatgggagatgagatggccttcacaaggctgatccgt
aaacccagcagcatgactgctggcccgggggctgaaggagaagatggagagttcacagtc
aaactccttaaggaggaggggctgaagctgacgttctctaagcaggctctgatgcccaat
gggtcaggagagagcagcaaccgcaaaaaacgcaaggaccaagagctgtcagacccagag
ggtctccttgatccactagagcgcactcctcgacggagggacccccccacgtggctgaaa
gagaacccagattatgaggtggagggagacatgctggagcttcttgtaaacaggagcaaa
aggaagaggaggaggagggcaaataaagttctaactggtagcgagaaggttaaagtcatc
aacatgaggacagggaagaaggtcggcgctgctttctgtccaatgctgcaagatctgagg
gagtatctcgaggagaatcctgataacgccgtagcgcctgattggtctgacacagttcgc
agttctggttttctgcctgagacccacttccaccgactgctgactgaccactcggaaatc
cctaagaaaagcagacgccgccatcatcatcaccaccatcaccaccaccatcaccacact
ccagagcctgttcctgaagaccccaacctggacggagttgaagaggagactctggtctca
gatggagcctacatgatggatgaggaggacctggagacctctcatcactttctcaccagt
ccagactttgatgttaaaatgatgggtggtgacagcatttcccatggtgactatgacagc
tcggatcaagaagcattattggacgatgtcatcatagcacagaaggactctgactcctca
tcaagctcagaggattga
DBGET
integrated database retrieval system
