Solea solea (common sole): 131457933
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Entry
131457933 CDS
T10853
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc)
KO
K04646
clathrin heavy chain
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04142
Lysosome
ssoe04144
Endocytosis
ssoe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131457933 (cltca)
04142 Lysosome
131457933 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131457933 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131457933 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssoe04147
]
131457933 (cltca)
Membrane trafficking [BR:
ssoe04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
131457933 (cltca)
Exosome [BR:
ssoe04147
]
Exosomal proteins
Proteins found in most exosomes
131457933 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
131457933
NCBI-ProteinID:
XP_058482454
LinkDB
All DBs
Position
4:15001605..15031080
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNIGINPANIGFSTLTMESDKFICVREKVGEQCQVVIIDMADPNS
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISAKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKMAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDADLWASVL
LESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLSWFLQE
DKRECFAACLFTCYDLLRPDVVLETSWRHNIMDFSMPYFIQVMREYLSKVDKLETSESLR
KEEEQATETQPIVYGTPQLMLTAGPSVPVAPPQPYGYGYQAPPAAYGQPAPQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgttttcaggagcacctgcagctccaaaacataggtatc
aatccagccaacataggattcagcaccctcaccatggagtctgacaagttcatctgtgtg
cgggagaaggttggcgagcaatgtcaggtggtgatcattgacatggccgacccaaactca
cctatccgcagacccatctcagctgacagcgccataatgaatccagctagcaaagtcatc
gcacttaaagctgccaaaactcttcagattttcaacattgagatgaagagcaagatgaag
gcacacaccatgactgatgatgttaccttctggaagtggatctccctaaacacagttgca
cttgtgactgacaatgctgtctaccactggagcatggagggtgactcacagcctgtgaaa
gtctttgaccgccactccagcctggcaggctgccagatcatcaactaccgcactgatgcc
aagcagaaatggctccttcttatcggcatctcagcccagcaaaatcgggtggtgggggcc
atgcagctctactctgttgacagaaaagtttctcagcctattgaaggccatgctgccagc
tttgcccagttcaagatggagggaaatgcagaggagtccactttgttctgcttcgctgtc
agaggccaggctggaggaaagttgcacatcattgaagtggggaccccaccaacaggcaac
cagccttttccaaagaaagcagtggatgtgttttttcctccagaagcccaaaatgacttc
cctgtggccatgcagataagcgccaaacatgatgtagttttccttattaccaaatatgga
tacatccacttgtatgacttggagacaggcacctgcatctacatgaaccgcatcagtgga
gagaccatctttgtcactgctccacatgaggccacctcaggcatcattggggtcaacagg
aaaggacaggtgctgtctgtgtgcgtggaagaggagaacatcatcccctacatcaccaat
gtactccagaatccagatctggctctccgcttagctgtccgcaacaacctcgctggtgct
gaagaactttttgcacgcaagttcaacaacctgtttgctgctggcaactactctgaggct
gccaaaatggctgccaatgcaccaaagggtatcctacgtaccccagacaccatccgtcgt
ttccagagcgttccagctcagccaggtcagacctctcccttgctgcagtattttggtatc
ctgttggaccagggccagctcaacaagtttgagtccctggagctttgcagacctgtcctc
cagcagggacggaagcagcttctggaaaagtggctgaaggaagacaagttggagtgttca
gaggagcttggtgacctggtcaaggcagtggatcccaccttggctctcagtgtctacctg
agggccaatgtccccaacaaggtcattcagtgctttgcagagactggtcagttcccaaag
attgtcctgtacgccaagaaggtgggctacactccagattggatctttctgctgaggaat
gtgatgcggatcaacccagagcaaggcttgcagtttgctcagatgctggttcaggatgaa
gagccactggctgacatcacgcagatcgtggatgtgttcatggagtacaacctgatccag
cagtgcacgtcattcctcctggatgctttaaagaacaacagaccctcagaaggaccactg
cagactcggctgctggagatgaacctcatgcatgctccacaggttgctgatgctatctta
ggcaaccagatgttcaccaactatgatcgtgcccacatcgcccagctgtgtgagaaggct
ggactcctgcaaagggcactggagcactacactgacctgtatgacatcaagcgtgctgtg
gttcatacacatctgctcaacccagagtggctggtgaacttctttggctcactgtcagtg
gaagactctctggagtgcctcagggccatgttgtcagccaacatccgccagaacctgcag
atttgcgtccaggtggcttccaagtaccatgagcagctcaccacacaatctctcactgag
ctctttgagtctttcaagagctttgaaggtctgttctacttcctcggctcaattgtcaac
ttcagtcaggaccctgatgttcacttcaaatacattcaggctgcctgtaaaacgggccag
attaaagaggtggagaggatctgtagagagagcaactgttatgaccctgagcgtgtcaag
aacttcctcaaggaagccaagctcaccgaccagttgcccctcatcatcgtatgtgaccgc
tttgactttgtccatgacctggtcctctacctgtaccgcaacaacctgcagaaatacatc
gagatctatgttcagaaggtgaaccctagccgtctgcctgttgtgataggcggtctctta
gatgtggactgctcagaggatgtaattaagagcctgatcttggttgtcaggggacagttc
tcaactgatgaactggttgctgaggtggaaaagcggaacagactgaagctgctgctgccc
tggctcgagtctcgaattcatgaaggttgtgaggagcccgccacccataatgccctggcc
aagatctacatcgacagcaataacaacccagagcgcttcctgagagaaaacccatactat
gatagccgtgtggtgggaaagtactgtgagaaaagagaccctcacctggcctgtgtggca
tatgaaagaggacagtgtgaccaggagctgatcaatgtctgcaacgagaactcccttttc
aagagcctgtctcgctacttggtccgtcgcaaagatgccgatctgtgggctagtgtgctg
ctggagagcaaccccttcagacgacccctgattgaccaggtggtacagactgcattgtca
gaaacccaggacccagaggaagtgtcggtcacagtcaaggccttcatgactgcagatttg
cccaacgagctcattgagctcctggagaagattgtactggacaactccgtttttagtgaa
cacagaaatctgcagaatctgctgatcctgacagcaatcaaagctgaccgcactcgtgtg
atggagtacatcagcaggcttgataactatgatgctcctgatatcgcaaacatcgccatc
agcaatgaattatttgaggaggcctttgccatctttaagaagtttgatgtcaacacctct
gctgtgcaggtgctgatcgagcacattggcaacctggacagggcctatgagtttgccgaa
cgctgcaatgagccagctgtgtggagtcagctggccaaggctcagctgcagaagggcctg
gttaaggaggccattgactcctacatcaaagccgatgacccctctgcatacatggaggtg
gtgcaggctgcagatcagagtggtaactgggaggacttggtcaaatttcttcagatggct
cgtaagaaggcccgtgagtcttatgtagaaacggagctcatctttgctttggccaaaacc
aaccgcctggcagaactggaagagttcattaatggacccaacaatgctcacatccagcag
gtcggcgatcgctgctatgatgagaaaatgtatgatgcagctaaactgctatacaacaat
gtatccaactttggtcgtttggcttcgactctggtgcacctcggggagtaccaggctgct
gtggatggcgcccgtaaggccaacagcacccgcacctggaaagaggtgtgctttgcttgt
gtggatggagaggagttcagactggcccagatgtgtgggcttcacattgtggtgcacgct
gatgagctggaagagctgatcaactactaccaagaccgtggctactttgaggagctaatc
acgatgctggaggccgccctgggcttggagcgcgctcacatgggtatgttcacggagctg
gccatcctctactccaagttcaagccacagaagatgagggagcatctggagctcttctgg
tctagagtcaacataccaaaggtcctgagagcagcagagcaggctcatctgtgggccgag
cttgtcttcttgtacgacaagtatgaggagtttgacaacgccatcatcaccatgatgaat
cacccaacagatgcctggaaagagggacagttcaaagacatcatcactaaggtggccaat
gtggaactctactacaaagccacccagttctatctggagtttaagccattgttactgaat
gatttgctcatagtgctttctcccagactggaccactcccgtgctgtcaacttcttcagc
aaggttaaacagctgcctctggtcaaaccttacctgcggtcagtacagaaccacaacaac
aaatcagtcaatgaggcacttaacaacctatttatcacagaggaggattatcaggcactg
agaacatcaatagatgcctatgacaactttgacaacatctcactggcccaacgcttggag
aagcacgagctgattgagttcaggagaattgctgcctacctcttcaagggcaacaaccgc
tggaaacagagtgtggaactctgcaagaaggataagctctataaggatgcaatgcagtat
gcgtcagaatctaaggacacagagctggcagaggagctgctgtcctggttcttgcaggag
gacaagagagagtgtttcgccgcctgcctctttacctgctatgacctgctgcgacctgac
gtggtgctggagacgtcctggaggcacaacatcatggacttttctatgccatacttcatt
caggtcatgagggagtacctcagcaaggtcgataaactagaaacctcagagtccctaagg
aaagaggaggagcaggcaacagagacacaacctattgtctatggcacacctcagctgatg
ctgacagcgggccccagtgttcctgtggcaccaccgcagccgtatgggtacggctaccag
gcaccacctgcagcatatggtcagccagcacctcagccaggctttggctatggcatgtaa
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integrated database retrieval system
