Solea solea (common sole): 131458157
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Entry
131458157 CDS
T10853
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
131458157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131458157
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131458157
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
131458157
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131458157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
131458157
NCBI-ProteinID:
XP_058482954
LinkDB
All DBs
Position
4:complement(10122379..10159888)
Genome browser
AA seq
1901 aa
AA seq
DB search
MFSTTPNKLNLLVNKLHQYLAHSAVEDSNGTPTAEDADGQKHHSCSMVMSKGHTAAEPGA
DNRYSRRKPSVVIKHSGLDHSGDSNASEDVELPVNENGHLDITRLPKGTVLVRPEPVDNG
RDYFRGPEFRTRKSGVLRKEFSRRRRGEEHMGIVSCTACGRQVNHFKKDTFYRHPVLKVL
ICKSCFKYYLSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKELSG
ILESKWYCYVCSPEPLFNLVMACDNVLENMEHLCQQQRRRNPVEPEKSELYDMLPHLPQN
IALDKWDHTGMDGNVVFNYSTLQISKELTKKAKHLVDSTNVLNRTFVSFINTATVNKQAP
NVRHLYLKSFLSVVKGLRKSLAVFEDGLKEEFIDLDVLSCWEKYLSDDFDSQPAADTELD
ISDETRLSDLQKLAAELVEEDESDAKCFIDGSVQDCPGEDVDSASHDSTQTTQKTDQKPS
ETEVNMTKKLVVKLTPVPVEKEASSNATEMDDTINSMDKKSKGKDKPEHSETVAPCAKID
RKISNDSTSASRLLEEEQGNRRSPRVKTTPLRRPSDVKAQTSLSPADSESDSDPEVTITT
APAKNTEEQSRSTARDDSDSDEVPPALLERAAMTQSSDEAQSDEDDAKASTKVAKKCLFW
LNKNTPISPKKMCRKRKMLDRSHESESSDRRIKARRGSGTDLSSDEQDSQKDMQCINKLS
SRGKCHLIKREEEGLARKQGRLRAVKSKPNYRQEVMESSSSSSEDERDDDSGSDGSDQKM
KPITDDVSLLGAAAFHQSSGDEEQSGPSWAAEDDDDPENRIAKKMLLAQIKANYSSGDDI
SSDEETLEEESESEVDKEIKQSIEENGADESGEDLTSESSETTSTEPNFRHHLLQHKLTL
NEGTSSHESITESAVGKQGSKKREKSFQADSESGSEIIALSLEDLGLSEELSQSEDETNE
DMPNRSSSKIKESCLGSEENEKVPCIWLSDSDVEKSDREDEDDKTNSQGTPKGRKKIRKI
LEDDNLLPETQEALREEEERIERLRNRDQHLEERREIINVGDELSQVLCPVTTKLVLDQD
EETKEPLVQVHTNLLTRLKPHQVDGVQFIWDSCCESVKKANSAPGSGCILAHCMGLGKTL
QVVAFLHTVLLSKNLKFRTALVVCPLNTILNWVSEFKKWQENMGQDKVKVAQLATQKNFP
ERLHALQTWQRDGGVMIMGYEIYRIMSLANKIEREQWKAELKRILVNPGPDIVICDEGHI
LRNNASNISKALNAINTRRRVVLTGTPLQNNLVEYHCMVSFIKKNLLGSLGEFRNRFINP
IQNGQCADSTPKDVRIMKKRAHVLHAMLAGCVQRRDYSELSQFLPPKHEYVLAVRVSPLQ
YKLYRYYLDHVTGVGPMTNTAKMKVGANLFKDFQALSRVWTHPWCLQLNYISKVKKGYFE
KDRQKAIALANEEATVAESATAGNNPGRTVIIDDSSSKDAPAVDGVIATTSSRSQSAGEG
WYKTMLSEKDATILQHSGKMVLLFEILRMAEELGDKVLVFSQSLISLNLIEDFLKASHQA
RHPASVKGSWIKNVDYYRLDGAVSAVRRMKWADLFNDATNVRGRLFLISTRAGCLGINLV
AANRVIIFDASWNPSYDIQSIYRVYRFGQEKQVFVYRFLAQGTMEEKIYDRQVTKQSLSF
RVVDQQQIERHFTLFELSELYTFEPDLLNDPNSKKSKRATSVPPKDAVLAQLLQTCNDQI
VSFHEHESLLDHKQEEELSEAERKAAWAEYEAESNAPSLLVNSSQDSLDMKTNEQLLELL
NKCRANVSEAFLALQKMKPHTIDDYMAQTRLQYPQLFEADVKIRAEIWRQWDIKEQERRQ
AFYRDVLSHQQSLTLRIQSILNSRRNQVMQTSAALNQPGRT
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaccactcccaacaagctgaacctgttggtcaacaagctgcaccagtacttg
gctcattccgctgttgaagacagcaatggcacaccaaccgcagaggatgctgatggtcaa
aaacaccacagctgttctatggtgatgtcaaaaggtcatacagcagcagagccaggagca
gataacagatactcaaggagaaaaccttctgtcgtcataaagcactctggactggatcat
tctggggactcgaatgcaagtgaggatgtggaattgccagttaacgaaaatggtcacctt
gatatcactagactacccaaaggcactgtgctggtcagacctgaacctgttgataatgga
agagattacttcaggggtcccgagtttcgcacccgaaaatcaggagtgctgcgcaaagag
ttctccagaagacgtagaggagaagagcacatgggaatcgtcagttgcaccgcatgtggc
cgacaagttaaccacttcaagaaagatactttctaccgccatccagttctgaaagtactc
atttgcaagtcttgcttcaagtattacctgagtgacgacatcagcaaggatggagatgga
atggatgagcagtgcagatggtgtgccgaaggaggcaacttgatctgctgtgacttctgc
agtaatgccttctgcaagaagtgtattctgagaaatttgggaaggaaggagctgtcgggc
atcttggagagcaagtggtactgctatgtgtgtagcccagagccactttttaatctagtg
atggcctgtgacaatgtcctcgagaatatggagcatctgtgtcagcagcagcgcagaaga
aacccagtagagccggagaaatcggaactctatgacatgttgcctcacttaccacaaaac
attgctttggataaatgggatcacacaggaatggatggtaatgtggtgttcaactacagt
acgctgcagatttcgaaggaattgaccaaaaaggccaaacatttagtggactcaacaaac
gtgttaaaccgcacgtttgtcagtttcataaataccgcaacagtaaacaaacaagcgcct
aacgttcgccatttgtacctaaagtcttttttgtcggtagtaaaaggcttgcgaaaatca
cttgctgtgtttgaagatggccttaaagaagaattcatagacttggatgtcttaagctgt
tgggaaaagtaccttagtgatgactttgactctcaacctgctgcagacacagagttagac
atctctgatgagacacgtttgagtgacttgcagaaattggcagctgaacttgtggaagaa
gatgaatctgacgcaaagtgtttcatagatggtagtgtgcaggactgccctggggaggat
gtggattcagcttctcatgattccacacagacgacacaaaagactgaccagaagccctct
gaaactgaggtcaatatgactaaaaaactagtagtcaaacttacacctgtgcctgtggag
aaagaggcctcctctaatgccacagagatggatgacaccattaactcaatggataaaaag
tccaaaggaaaagataaaccagaacatagtgagacagttgctccatgtgctaaaattgac
cggaagataagcaatgacagcaccagtgcatctcgactcctagaagaggaacaaggcaat
agaagatctcctcgtgtcaaaacgacacctttgcgacgaccaagtgatgtcaaggcccaa
acatctctttcaccagcagacagtgaaagtgattctgacccagaggtaaccatcaccaca
gcaccagccaaaaacactgaagagcaaagtcgaagcacagcaagagatgactcggactcg
gatgaagttcctccagctttgcttgagcgagcagctatgactcagagctctgatgaagcc
cagagtgatgaggatgatgcaaaagcatcgacgaaggtggccaagaaatgtctcttctgg
ctcaataagaacactccaatctcacccaagaagatgtgccggaaacgcaagatgctagac
cgctcccacgagtccgaatctagtgacagaagaatcaaagctagaagaggaagtgggaca
gatctctccagtgatgagcaagactcgcagaaggatatgcaatgcataaacaagctgagt
tcaagaggaaagtgtcacctcattaaaagagaagaggaaggattggccagaaagcaggga
agactaagggctgtgaagtctaagcctaattatcgtcaggaagtaatggaatcatcatcc
tcatcaagtgaagatgaacgggacgacgactctgggagcgacggaagtgaccagaagatg
aagccaatcactgatgatgtgtctttactgggagcagcagcattccaccaatcttcagga
gatgaggagcagtctgggccttcgtgggcagcagaagatgatgatgatcccgaaaataga
atcgctaagaaaatgcttttggcccaaatcaaagccaactactcctccggtgatgatatc
tcttcagatgaagaaacgctggaggaagagtctgagtcagaggttgataaagagatcaaa
caaagcattgaggaaaatggagcagatgaaagtggggaagacttgacctcagaatcatct
gagaccacatccactgagcctaacttcagacaccatctgctccaacataaacttacctta
aatgagggaacatcaagtcacgagagcataacagaaagcgctgtaggaaagcaggggagc
aagaaaagagaaaagagctttcaagctgacagcgagagtggaagtgagattatagcgctg
agtctggaagaccttggcctgagtgaagagctgagtcagtcagaggatgagactaatgaa
gacatgcccaacagatcatcatctaaaataaaggagtcatgtcttggttcagaagagaat
gagaaagttccctgtatttggttgtctgactctgacgtcgaaaagagtgatcgagaggat
gaagatgataagactaacagccaaggcaccccaaaaggacgcaaaaagatccgcaaaatt
ctggaagatgataaccttctccctgagacccaagaagcactgagagaagaggaggagaga
attgaacggctgagaaacagggatcaacacttggaggagaggcgagagatcatcaatgta
ggggatgaactgtcacaagtgctgtgtcctgtcactacaaagctggtgttggatcaggac
gaggagaccaaggagcctctcgttcaggtgcacacgaacctcctgacaagactgaagcct
catcaggtggatggtgtacagtttatctgggacagctgttgtgagtcagtgaagaaggcc
aactctgctccaggatcaggctgtatactggctcactgcatgggcctgggaaaaactctg
caggtggtagcctttctccacacggtgctgctgtcaaagaacctgaagttcagaaccgcc
ctggtggtgtgtcctctcaacacaattctcaactgggtcagcgagttcaagaaatggcaa
gaaaacatgggacaagacaaagtcaaggttgctcaactggcaacacagaagaattttcca
gaacggcttcatgctctgcagacatggcagagagatggaggtgtcatgataatggggtat
gagatataccgcatcatgtcattagcaaataaaatcgagagagagcagtggaaggcagag
ttaaagaggatactggtgaacccaggcccagatattgttatttgtgacgagggccacatc
ctacgcaataatgcatccaatatctccaaagctttgaatgccatcaacactcgccgaaga
gtggtgctgactggaacaccactgcaaaacaacctggttgagtaccactgcatggtcagt
ttcatcaagaagaacctcctgggctcattgggcgaattccgaaaccgcttcatcaacccc
attcagaacggccagtgtgccgactccacaccaaaagatgtgcggatcatgaagaagaga
gcacacgtacttcacgccatgttggctggatgtgtacagagaagagattactctgagttg
tcccagtttctacctcccaaacacgagtacgtgctggcagtgagggtttctccacttcag
tataaattgtaccgctactacctcgatcacgtcactggtgtgggtcccatgactaacaca
gcaaagatgaaggttggagcaaatctgttcaaagactttcaggcgctcagtcgagtctgg
actcatccctggtgccttcagcttaactacataagcaaagtaaaaaagggatattttgag
aaggaccggcaaaaagcaatagctctggcaaatgaagaagcaactgtggctgagagtgca
acagcaggaaacaatccaggcagaactgtgattattgatgattcgtcgtccaaagatgct
cctgcagtagatggagtgatagcaaccaccagctcgaggtctcaaagtgcgggtgaaggc
tggtacaagactatgttatctgagaaagacgccacaatcctgcagcactcagggaagatg
gtgctcctgtttgagattctcaggatggctgaagagctgggggataaagtgcttgtgttt
agtcagtccttaatctcattaaacctgattgaggatttccttaaggcttctcaccaggcc
agacacccagcttcagttaaaggcagctggattaaaaacgttgattactatcgtcttgat
ggcgccgtcagtgctgtacgtcgtatgaaatgggcagatctgttcaacgatgctaccaat
gtccgtggacgactgttcctcatctcgacacgagccggctgtcttggcatcaacctggtg
gctgcgaatagggtcatcatctttgacgcctcgtggaacccatcctatgacatacagagc
atatacagggtgtaccgctttggtcaggagaagcaagtgtttgtctaccgcttcttggct
cagggcaccatggaggagaagatctatgatcgtcaggtgaccaagcagtccttgtccttc
cgagtggtggatcagcagcagattgagaggcacttcactctctttgaactcagcgaactt
tacacatttgaaccagacctgctgaatgaccccaactccaagaaaagcaagagagccacg
tctgttccgccaaaggatgcggtcttagcacagctcttacaaacctgtaacgaccagatc
gtgtcattccatgagcacgaatctctgctggaccataaacaagaggaggaactcagtgaa
gcagagcgcaaagcagcctgggctgaatatgaggccgagtcaaacgcacccagccttctg
gtcaactccagccaggactccttggatatgaagaccaatgaacaactattggagctgctg
aacaaatgcagagcgaatgtgtccgaggcttttctggctctgcagaagatgaagcctcac
actattgatgactacatggcacagacgcggcttcagtatccacagctgtttgaggctgac
gtcaagatcagggctgagatttggagacagtgggacatcaaggagcaggagcgcaggcag
gccttctatcgagatgttctctcacaccaacaatcactgactctcaggattcagtccatc
ctgaacagtcgcagaaaccaggtgatgcagacgagtgcagcgctgaatcagcccggacgc
acgtga
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