Solea solea (common sole): 131458292
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Entry
131458292 CDS
T10853
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131458292 (zc3h12b)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
131458292 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
131458292
NCBI-ProteinID:
XP_058483247
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Position
4:complement(10556454..10572791)
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AA seq
850 aa
AA seq
DB search
MTAWSLLEKLKMEKHSCREENIDSSEAQHATDESEDGSSSESESEERRHQRLQVNSSGSS
SICKKWEAGAVTKPHRQLCRSPCLDRPSFSQSSTAVDFREDESSVGPGIKAASDREYQAK
MEFALKLGYSGEQVETVLNKLGAAALINDVLAELVRLGNKVEPEVQPCSSTATLISRSLC
VKEIVSPEVSVEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGMQLAVEWFREKGHK
DITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLA
YDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLR
KRPVVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGA
LVKCGTGPAAAKGDSSSEAKRVAPKRQSDPSIRAVACEPSEALSVIRKSETNSVPSLVSA
LSVPTMQPPKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASVTY
SDQFPKYDSVSDHGYYSLHSDFSNMSMSSMQNVDSFCSMEHEHGVYQRNLSHCPESCLSH
SNSDSFSSYVDLYPSSVDSSLEESMKGQQQSPAQGRMHTFSHGFRHEALTRVQSYGPEEP
KQGPRKQSGSHLAPHIQHVAVGARSSCPGDYPLTQTALPPLSSQPSRSLGMTRMDSISDS
RLYESNPMRHRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKM
EQIWNSPWETLSAAEHQDRYVIPEHQYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQQLAA
VIVTKLRSCH
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatggtccttgttggagaagctcaaaatggaaaaacactcatgtagggaggag
aacattgactctagcgaggcgcagcatgccactgacgaatctgaggatggaagcagctct
gaaagtgagtcagaagaacgacgacaccagaggcttcaggtgaacagcagcggcagcagc
agcatctgtaaaaagtgggaggctggggctgtcactaaaccacaccgtcagctttgtcgc
tctccatgcttggaccggcccagtttttcccagagtagtaccgcggtagatttccgtgag
gatgagagcagtgtgggaccagggatcaaggctgccagtgacagggaataccaggccaag
atggagtttgctttgaagttgggctattctggagagcaggtggagactgtgctcaacaag
ctgggagctgccgctttaattaatgatgttcttgcagagttggtaaggctcggaaataaa
gtggaacctgaagttcaaccttgcagcagtacagccacactgatatcacggtccctctgt
gtgaaggagatagttagtccagaagtgtcagtggaagaggaatctgtggatacctatgat
aacctcaggcctattgtcattgatggatcaaatgtggcaatgagccatggaaacaaagaa
gtgttctcttgccgtgggatgcaacttgctgttgagtggtttcgggagaaaggacacaaa
gacatcactgtgtttgtcccagcctggcgaaaagaacagtcaagacctgatgccctcatc
acagatcaagaaatattacgcaagctggaaaaagagaagattctggttttcaccccttct
cggagagttcagggcagaagggtggtgtgctatgatgatcgcttcatagtgaagctggct
tatgattctgatggaattattgtgtcaaatgacaactacagagacctgcaaaacgagaag
cccgagtggaagaagtttatagaagagcgcctcctaatgtactcctttgtcaatgacaag
tttatgccacctgatgatcctctgggaagacatggtccaagcctggaaaatttcctccgc
aaacgccctgttgttccagagcacaaaaaacaaccctgcccctatgggaaaaagtgcaca
tatggacacaagtgcaagtactatcatcccgagcgtgtgaaccagccacagcgctcagtg
gccgatgaactacgagcctttgccaagttgtctgcagtgaagacgatgagcgagggggct
ttggtgaaatgcggcactggtccagcagctgcaaagggggacagcagctcggaggccaaa
cgcgtggcacccaaacgtcagtctgaccccagtattcgcgcagtggcctgtgaaccttca
gaggcactgtctgtcattaggaagtctgagacaaattcagtgccttccctcgtctctgct
ctcagtgtgcccaccatgcagcctcctaagagccatgcagctggggccttgaacacacga
tcagccagcagtccagtgccagggtctctacagtttgctcacagttctctggagcacatg
tccagtgtgcagtaccctcccattttagttactaacagtcatggcgcctctgttacatac
agtgaccagttcccaaaatacgactcggttagtgaccatggatattactcactgcacagt
gatttttcaaacatgagcatgagcagcatgcaaaatgttgatagtttctgtagcatggag
catgagcatggtgtgtatcagagaaatctcagccactgccctgaatcctgcctgagccat
tcaaacagcgactccttctcctcctatgtggacctatacccaagttctgtggacagcagc
ctggaggagagcatgaagggacagcagcagtctcctgctcagggcagaatgcacactttc
tcacatgggtttcgccatgaagcgctgaccagggtacagagttatggaccagaggaaccc
aagcagggcccccgtaagcagtctgggtctcatctagcaccacatatccaacacgttgct
gtgggagccagatctagctgtcctggagactatcccctaactcagactgccctgccacct
ctgtcctcacagccatcacgctcacttggtatgacccgtatggacagtatatcagactca
cgactatatgagagcaacccaatgagacatagacgacctccactgtgtcgtgagcagcat
gcaagctgggaccctctgccttgtggtaatgagtcctatggctatcattcatatccactg
agtaacagcctgatgccatgttgtgagcgagtgatggtccgcagcatgcctgacaaaatg
gaacaaatctggaactcgccatgggaaaccctgtctgcagctgaacaccaagaccggtat
gttatcccagagcaccagtatcaaacatatcggaacctctgtaacatctttcccgcttac
atagtgcactcagtcatggagaagaatcctcatttgacagacccacagcaactcgctgcc
gttattgttacaaaactaaggtcgtgccactga
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