Solea solea (common sole): 131458393
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Entry
131458393 CDS
T10853
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131458393 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssoe04040
]
131458393 (trpv1)
Ion channels [BR:
ssoe04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
131458393 (trpv1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ion_trans
Ank_3
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
131458393
NCBI-ProteinID:
XP_058483452
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Position
4:13976913..13995305
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AA seq
757 aa
AA seq
DB search
MKKSEKFGISMETDDRTEEDKTCVGPESPGATMDTNHERRKEGKPELRYNANFYKMMHNL
DTDSVAINYSRLFEDVASGDVKRLEGLYQYLQDTGKKLSDSLYQSEGKTALMKALLHLRN
NKNDTVELLLDISEKQGDIDKFVNAAYNSKYYNGQTALHIAIERRSLPYVKLLVSKGANV
HAKADGKFFQPHDGPNFYFGELPLSLAACTNQADIVDFLMENAQADAKLTDSHGNTVLHA
LVVVAAVKCEDNTEFVTSMYDRVLKTSDRLHPKLKLEDIKNKMGLTPLKLAAKTGKIGIF
SHILKREFHDSHTKHLSRKFTEWVYGPVHSSLYDLASVDSCEDGSVMEILIYGSDIPNRH
EMLETEPVSQMLEHKWKKFAGGMFVLNFLFYVAYLIIFTLVSYNKRNGNPPFETEHTIKG
YLYVSGQLMTLLANVYFFFIGIIDMRRKRPKLKTLLIDGYYEILFFVQGVLFLVTAALYV
LGRHEYLGFMVMCLALSWVNVLYFSRGDRHMGIYSVMIQKMILSDILRFLFVYVVFLFGF
SAAVVTLLIEPPAKNITRNGRFFSPVAPDEPCVKPTFRNISYTTLQLFKFTIGMGDMEFT
EDYQYREVFYILLIGYIILTYILLLNMLIALMNRTVERITKDSASIWKLQRAITILDMEK
RLPACLRRSFHCGVQKELGPAVGDDCRQCLRVEEVNWNKWNINLSKINEDPGCWDRPPQT
AIDAPLNSAWRSRRGLFSGRRQRQQSTEMTPLSSMPV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcagagaagtttggcatctccatggagaccgacgacagaacagaggaggac
aaaacatgtgtgggccccgagagccccggggctaccatggacactaaccatgagaggagg
aaggagggcaaacctgaactgagatataatgccaacttttacaaaatgatgcacaattta
gacacagacagcgtggctattaactatagcaggttgtttgaagacgtggccagtggggac
gtcaaacggctggagggcctgtaccagtacctgcaggacactgggaagaaactctccgac
tccctgtatcagtccgaaggtaaaaccgccctaatgaaggctctgctgcacctcagaaac
aacaagaatgacacggtggaactattacttgacatttcggagaagcagggagacatcgac
aagtttgtgaatgcagcctacaatagcaaatattacaatggtcagactgctctgcatata
gctatcgagaggaggagtcttccctacgtgaaactgctggtcagtaaaggggcaaacgtc
catgccaaagccgatggaaaattctttcaaccacatgacggccccaacttttattttggt
gagctgcctctgtctctggcagcctgcaccaaccaggctgacatagtggacttcctgatg
gagaacgcgcaggcggatgcaaagctgacggactctcatggtaacacggtgctgcatgcc
ctggtagtggtggcagcggtcaagtgcgaggacaacacagagtttgtcaccagcatgtac
gaccgcgtcctcaagaccagcgaccgactgcacccgaagctgaagctggaggacattaag
aacaaaatggggctgacgcctctcaaattggctgccaagacgggcaagatagggattttt
tctcacatccttaaacgggaatttcacgacagtcacaccaaacatttgtctcgcaaattc
acagagtgggtttacgggcccgtccacagctccctatacgacctggcctcggtggattcc
tgtgaagatggctcggtcatggagattctgatctatggcagtgacattcctaaccgtcat
gagatgctggagacggagcctgtgagtcaaatgctggagcataagtggaagaagtttgcg
ggtggaatgtttgtcctcaacttcctgttctacgttgcataccttatcatcttcacttta
gtgtcttacaataagaggaatggaaatccaccgtttgaaaccgaacacactatcaagggt
tacctgtatgtttcgggccagctcatgacactactggcaaacgtctacttctttttcatc
gggataattgacatgaggaggaagcgcccgaagctgaagacgttgctcatcgatggatat
tacgagattctgttttttgtgcagggcgtcctcttcctggtcacggctgctttgtacgtg
ttggggcggcacgagtacctgggtttcatggtgatgtgtcttgctctgagctgggtgaac
gtgctctacttctccagaggagacagacacatgggcatctacagtgtcatgatacagaag
atgatcctcagcgatatcctgcgcttcctttttgtctatgtcgtctttctctttggattc
tcagcagctgtggtcactttactcattgagcctcctgcgaaaaacatcactaggaatggg
cgcttcttcagtcccgtcgccccagatgagccatgtgtaaaacccacgttcagaaacatc
tcctacaccacgctgcagctcttcaagttcaccatcggcatgggtgacatggagttcact
gaggactaccaatacagggaggtcttctacatactcctcatcggttacatcatactcact
tacatcctgctgctcaacatgctcatcgccctcatgaaccgcaccgtggagaggatcacc
aaggacagtgccagcatctggaagctgcagagggccatcaccatcctggacatggagaaa
aggctgcctgcctgtctgaggaggagtttccattgtggggtgcagaaagaactgggccct
gcagttggagacgactgtcgccagtgtttaagagtggaggaagtcaactggaacaaatgg
aacatcaacctgagcaaaatcaatgaggatcccggctgctgggatcgtccgccacagact
gccatagatgccccgctgaactcagcatggaggagcaggagaggccttttcagtggacgg
aggcagagacagcaatccacagagatgactcctctgagcagcatgccagtctaa
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