Solea solea (common sole): 131458516
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Entry
131458516 CDS
T10853
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131458516 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssoe04990
]
131458516 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
ssoe04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
131458516 (pdlim4)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
131458516
NCBI-ProteinID:
XP_058483655
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Position
4:complement(22656830..22695342)
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AA seq
387 aa
AA seq
DB search
MPNMAQSVTLKGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILAINGDST
EHMTHMDAQNRIKNCVQQLTLNIIRSGSGDRVWSPTLSEDGKTSPYMEPDSQNFRPITSG
HSGYSRKTSYTPELQSPQPTQLTQPTPPTPLTPLTQPAHMNNGHSKPPSYSPTSVYGNGS
GHNQYNNPAGLYGGGSGSNGDRHLPNKMGNLSLSTTHSPEPPVHSPTGRNGVDTQSDVYK
MLQHYEEPASQPKQSGSFKYLQGILEAEDGGVSPTERMRSLRSPVRSPIPKLGSPIPTVP
SPMPGLQKLPQCTRCCNGIVGTIVKARDKLYHPDCFMCDDCGVNLKQRGYFFIEDSLYCE
THAMARVQPPEGYDVVAVYPNSKVELV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacatggcccagagcgtgactctaaagggaccctctccctggggctttcggctg
gtgggaggacgggatttcagcactccgttaaccatctccagggtaacaccaggcagcaag
gcggcccagggcgacctgtgtccaggcgacaccatcctggccatcaacggtgacagcacg
gagcacatgacacacatggacgctcaaaaccggatcaaaaactgcgttcagcagctcacg
ctcaacatcatcaggtcgggatcaggagacagagtgtggtcgccaactcttagcgaagat
ggcaagacaagcccttacatggagcctgactcacagaatttccgtcccatcaccagtgga
cacagcggttacagccgcaaaacttcatacacacctgagctacagtcccctcagccgact
cagctgacccagccgaccccaccgaccccgctgaccccgctgacccagcccgctcacatg
aacaacggacactccaaaccgccgagctacagccccacctccgtgtacggaaatggatcc
gggcacaaccagtacaacaacccggcgggactgtacggcggcggcagcggcagcaacggc
gaccgacatctgcccaacaagatggggaacctcagccttagcaccacgcacagcccagag
cctcccgtgcactctcccacgggccgcaacggtgtcgacacacagtcggacgtctacaag
atgttgcagcactacgaggagcccgcctctcaacccaaacagtccggctccttcaaatat
ctccagggaatcctggaggccgaggacggaggtgtgtctccgacagagagaatgagaagc
ctgaggtctccggtccgatccccaatccccaaactgggaagccccattcccaccgttccc
agccccatgcctggtcttcagaagctgccccagtgcacacgctgctgtaacggcattgtt
ggcaccatcgtgaaggccagggacaagctctaccaccccgactgcttcatgtgcgacgac
tgcggcgtcaacctcaagcagcgcggctacttcttcatcgaggacagtctgtactgcgag
acccacgccatggcgcgcgtgcagccgcccgagggctacgacgtggtcgccgtgtacccc
aactccaaggtggagctcgtctga
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