Solea solea (common sole): 131458576
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Entry
131458576 CDS
T10853
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131458576 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131458576 (nup98)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131458576 (nup98)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131458576 (nup98)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131458576 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
131458576
NCBI-ProteinID:
XP_058483731
LinkDB
All DBs
Position
4:complement(681836..702428)
Genome browser
AA seq
1848 aa
AA seq
DB search
MFNKSFGTPFSGGTGGFGNTSTFGQQNAGFGTTGGFGAAGGFGATANTGGLFGTTQNKPG
GLFGSNTFSQPATSSTSTGFGFGAASGTSTSLFGNTGTGTTGGLFSQTNNAFGANKPTSF
GSFGTSTSSGGGLFGATNTASNPFGGTNSLFGGSGFSQAAQQPGTTVKFNPPTGSDTMVK
AGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPATGGLFGTATATSS
ATPGLFGATAPNTSFSFGQNQKTTFGAAPATGFGNATGSMFGQPSQQQAGSFFKPFGQTT
TAQNTGFSFGNTNTMGQANTSSMGLFGNTAASQAGGLFGAAQTASTATGFGTGTGLFGQT
NPGFGTAGTQPSLFGNKTAGFGTTTTSAPSFGTGAGLFGTNKPALTLGPGTNTSTFGFGA
AAAGGSLFGNKPATGGLGTGLGTSFGTAVGTGQTSLFGNNQNKLGTTLGGIGAFGTAGFN
TGTSSLGFGAPQQPVALTDPNAAAAQQAALQQQLSVLAYSPYGDSPLFRNPLSDPKKKEE
RLKPTNPSAQKALTTPTHYRLTPRPATRVRPKSLSSSSSSKSQLFDGLDDDEPSLTNGAF
IPRKSIKKLVLKNLNSSQYNSQTETETDDLASPSEYPQNGHSLVQEEEELRELAGSRGGR
GDDHEVTQFYVNPIAKPIPQGRTQSSLQDTISDLNMHKAARNGLELSSDDVSASLGEESL
QEDREEEQQEAQQSPHPAGVVLNRLGYYTIPSMKDLADMVDESGECAVENFTVGRKGYGS
IFFPGEVNVTGLNLDEIVFFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTSC
TQIRSPERLSDMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDV
PLKTDPKKLKTMMSLPPSKLQQQLSPSQQQVAPQAQSTVAVDAPGGVVELDSDMADITQS
FLPERLLGGKEDGGDLPAGELSDTMSEKLGGWISAEHDSISASGHMATALGINPHTLQIM
KASLFVEDEEESDMFQDRGAVKVAADVSSPRLVKPGAQSRPSVGGLLQARFTSGLLSQLP
DSPRPPHPPSLSRASPAFGDAPRPLHWAGPAPSFLLPPRTPEPSIRTVGARRLGGPVPLK
ESIVSGKGGLLMDTGLFMGRTFRVGWGPGWTLAHCGERLSSPTSKQLERQELTARTDFSF
LPKPARNKPLTQSPYKVVLEQLEGLEPPMMKTSEEEDDEDSQAVLQRPLAICLEHSTIST
ADESSCPLVQPQPGVAALHEYAKWITELNEQQGEADALLGHWAEVWTLCEALWGQVGAAD
QEADLETPSDYEQQLERRQTFSAWLSRGATCRVEEEVSVTGKGRHTEAIFSYLTGNRLSE
ACRLAQKEGDHRLSLLLSQAMGSQYCRELLGLQLADWNRMQTDCYLPEERLRIFTLLAGK
PVWQSSDDSVVNVCSQLDWKRCVAVHLWYMLPPTASVADALVKYEAAFQGSGEGGRYACA
PLPPYLEAETEEMEEEEAESRQPLYDLCFHLLKLYSDRHYSLQQLLDPLAVTWERLDYRL
SWHLWGVLQALHYTHLSASRQGLLHASYAAQLESAGLWHMAIFILLHIPDHTQRERAVRD
MLTLHCPLQETDESARRERFLTERLLVPEQWIHEAKATRARRDGDRHQEALHLYRAGFWN
QCHRLLIQHLASDCIINDNQDYLLEFVEGLSVPEHSATIQDWDTAGKVYLDYIRVIKTLQ
DIQQMVNSGYEVERLYTDVTSLCGRIELLPCSTARDRLAQSEMAKRVANILRVVLSLQHG
DSAASDSAAVPLAQLAPHVTRLPMPEDYTLEELRGLTQSYLRQLVVGQ
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttgggacaccgttcagtggagggacgggcggcttcggcaacacg
tccaccttcggacagcaaaacgctggctttgggacgaccggaggctttggagcggccgga
ggctttggggcgaccgccaacactggaggactgttcggtaccacacagaataaaccaggt
ggtctgtttgggtccaataccttcagccagccggcgacatcctccaccagcacaggcttt
ggttttggtgcagcgagtggtacgtccaccagtctgtttggaaacactggaactggcaca
accggtggactcttctcccagaccaacaatgccttcggtgccaacaaacccacgtctttt
ggaagcttcgggacaagcaccagcagtggcgggggcttatttggggcgaccaacaccgcc
tctaacccatttggcgggacaaactccctgttcgggggctctgggttctcgcaggccgca
cagcagccgggaacaaccgttaaattcaatcctccaacaggaagtgacacgatggtgaaa
gctggcgtgaccacgagcatcaacaccaagcaccagtgcatcacagccatgaaggagtat
gagaacaaatcactggaggagttgagactggaggactaccaggcaggaaggaagggcccc
accaatccgatggcgcctgccaccggcggcttgtttggtacagcaacagccacgtccagc
gccaccccgggcctgtttggtgccacggccccaaacaccagcttctccttcggacagaac
cagaagaccacatttggagcagcgccggccacgggctttggaaacgccacgggcagcatg
ttcggacagccgagtcagcaacaagccggcagcttcttcaagccgtttggtcagaccacc
accgcccagaacaccggcttctccttcggcaacaccaacaccatgggccaggccaacacc
agcagcatgggtctgtttggaaacacggcagcgtctcaggcgggcggcttgtttggcgcc
gcgcagaccgccagcactgccactggctttggcaccggcaccggactgttcggacaaacc
aaccccgggtttggaaccgctggcacacagccaagtttatttgggaataagacggccggg
tttggcaccaccaccaccagtgctccgtctttcggcaccggcgccgggctctttggaaca
aacaaacccgcactgacgctgggacccggcaccaacacctccacctttggttttggcgcg
gccgctgctggagggagtctgtttgggaataagccggccaccggaggactgggaaccgga
ctgggaaccagctttggaacagcagtgggcaccgggcaaacgtctctgttcggaaacaac
cagaacaaactgggcacgacgctcggaggcatcggagcgttcggaacggccggattcaac
accggaaccagcagcctgggcttcggggctccgcagcagcccgtcgctctcacagatcca
aacgcagcggccgcccagcaggcagcgctccagcagcagctcagcgttctggcttattca
ccgtatggcgactcgccactctttagaaacccactgtcagaccccaaaaagaaagaggag
cgtctgaaaccaaccaacccctcggcccaaaaggctctgaccacgcccacacactacagg
ctgaccccgcggcctgcgaccagggtccgccccaagtcgctgtcgtcgtccagctcctcc
aagtcgcagttgtttgacggtttggacgacgatgagccgtcgctcaccaacggagccttc
ataccgaggaaaagcatcaagaagctggtgctgaagaacctgaacagcagtcaatacaac
agtcagacagagacggagacagacgacctggcttcaccatcagagtatccacagaatggc
cacagccttgtccaggaggaggaggagcttagggagctggcaggctccagaggcggccga
ggggacgaccacgaggtcacccagttctatgtaaaccccatcgccaagcccatcccacag
ggccgtacacagagcagcctgcaggacaccatcagtgacctcaacatgcacaaagcagcc
aggaacggtctggagctgagcagcgacgacgtgtcggcgtctctgggggaggagtctctg
caggaggacagagaggaggagcagcaggaggcgcagcagtctcctcaccctgcaggcgtc
gtcctcaaccgtctgggttattacaccatcccctccatgaaggatctggccgacatggtg
gatgagagcggcgagtgcgcggtggagaacttcaccgtcggcaggaaaggttacggctcc
atcttcttccccggcgaggtgaatgtcacgggtctcaacctggacgagatcgtcttcttc
agacgcaaggaggtcatcgtgtacccggacgacaagaacaagcctcctgagggggagggg
ctgaacaggcgcgcagaggtgaccttggacggcgtttggccgaacgacaagacgtcgtgc
acacagatcaggagcccggagcgtctgtccgacatgaactatgaaggccgcctggaaaaa
gcctcgcggaaacagggcgcgcgtttcctggagtacagacctgagacgggatcctgggtg
tttgaggtggcccacttttccaaatatggcctccaggactctgacgaggatgaggacgtt
ccgctcaaaaccgaccccaagaagctcaagaccatgatgtcacttcctccctccaagctg
cagcagcaactctcccccagccagcagcaggtggcgccacaggctcagtccactgttgcc
gtggatgctcctgggggcgtggtcgagctggacagcgacatggccgacatcacacagagc
ttcctgccagaaaggctgcttggagggaaggaggacggcggcgacctgccggcgggcgag
ctgtcagacacgatgagcgagaagctcggaggttggatctctgccgagcacgacagcatc
tcggcgtctggccacatggcgactgcgctgggcatcaacccacacaccctgcagatcatg
aaggcgtctctgttcgtcgaggacgaggaggagagcgacatgtttcaggaccgaggagca
gtgaaggtcgctgccgacgtctcatctcctcgccttgtgaagccgggagctcagagccga
ccctctgtgggtggtcttcttcaggctcgttttacctcgggcctcctctctcagctccca
gactccccccgccctcctcaccctccctctctctcccgagcgtcgccagcgttcggtgac
gccccccgccctctgcactgggcggggccggccccttccttcctgctgccgcctaggact
ccagagccgtccatcaggaccgtcggcgcacggcgtctcggcggccccgtccccctcaag
gagtccatcgtctcagggaagggaggtttgttgatggacaccggactcttcatggggcgg
acctttcgggtcgggtggggaccaggctggacgctggcgcactgcggcgagcggctgagc
tcaccgacctccaaacagctggagcgccaagagctgaccgccaggacggacttcagcttc
ctgccgaaacctgccagaaataaaccactcactcagagtccgtacaaggtggttctggag
cagctggagggtctggagcctccgatgatgaagacgagcgaggaggaggacgatgaggac
agtcaagcagtgctgcagcgccccctggcgatctgtctggagcacagcaccatcagcacc
gcagacgagtcctcctgtccgctggtgcaaccgcagcccggtgtggcggcgctgcacgag
tacgccaagtggatcacagagctgaacgagcagcagggggaggcagacgctctgctgggt
cactgggccgaggtctggactctgtgtgaggcgctgtggggtcaggtcggtgccgccgat
caggaggccgacctcgagacgcccagcgactacgagcagcagctggagaggcgacagacc
ttctcagcgtggctgtcacgtggcgccacctgcagggtggaggaggaagtgtctgtgacg
ggcaagggccgccacacggaggcgatcttcagctacctgactggaaaccgcctcagcgag
gcgtgtcggctcgcacagaaagaaggtgaccaccgtctgtccctgctgctgtctcaggcc
atgggctcccagtattgccgcgagctgctggggctgcagcttgccgactggaaccgcatg
cagacggactgctacctgcccgaggagcgactgcgcatcttcacgctgctcgcgggaaaa
ccggtgtggcagtcgtcagacgactctgtggtgaacgtttgctctcagctggactggaaa
cgctgcgtcgccgttcacctgtggtacatgctgcctcccaccgcctccgtggccgacgcc
ctcgtcaaatatgaagctgcgttccagggctccggtgagggagggaggtacgcctgtgcc
ccgctgcctccctacctggaggcggagacagaggagatggaggaagaggaggcggagtcc
aggcagccactgtacgacctgtgcttccacctgctcaaactctacagtgacagacactac
agcctgcagcagctgctcgatcctctcgccgtcacctgggagcggctggactatcgcctg
agctggcacctgtggggcgtcctgcaggcgctgcactacactcacctgagcgcctcgcgg
cagggactgctccacgccagctacgctgctcagctggagagcgccggactgtggcacatg
gccatcttcatcctgctgcacatccccgaccacactcagcgggagcgagcggtgcgggac
atgttgaccctccactgccccctgcaggagacggacgagtctgcgcggagggagcgcttc
ctgaccgagaggctgctggtcccagagcagtggatccacgaggccaaggccaccagagcc
cgccgcgacggggacagacaccaggaggcactgcacctgtaccgtgccggattctggaac
cagtgtcaccggctgctgatccaacacttggcctcagattgcatcatcaacgacaatcaa
gactacctgctggagtttgtggagggactgtcggtccctgaacacagcgccaccatccag
gactgggacactgcaggaaaagtttacctagattatatcagagtcatcaagacactgcag
gacatacaacagatggtaaactctggttatgaagtcgagcgtctctacacagacgtgacg
tctctgtgcggcagaattgaactcctgccctgcagcaccgccagagaccgcctcgcccaa
tcagaaatggcgaagcgcgttgcgaacatcctgcgcgtggtcttgagtctccagcacggc
gacagcgcggcgtccgactccgccgcagtgccactcgcccagctggcgccgcacgtcacc
cgtctgccgatgcccgaggattacacgctggaggagctgagaggactcacgcagtcgtac
ctgaggcagctcgtcgtcggccaatga
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