Solea solea (common sole): 131458694
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Entry
131458694 CDS
T10853
Name
(RefSeq) LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog B-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
131458694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131458694
03400 DNA repair and recombination proteins [BR:
ssoe03400
]
131458694
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
131458694
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
131458694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
HEAT_EF3_N
INTS7_N
EnP1_C
Motif
Other DBs
NCBI-GeneID:
131458694
NCBI-ProteinID:
XP_058483880
LinkDB
All DBs
Position
4:20458091..20479899
Genome browser
AA seq
1333 aa
AA seq
DB search
MAHSKARAVDAKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTFPEKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSXLAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEFLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNFVKERTLDKRWRVRKEAMMGLASIYRKYS
LXGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMXSSQLETSERMKCLYYL
YATLDTNAKCCQRDITKKLGSPKQPSNPFLEMVKFLLERIAPVHIDTESISALIKQVNKS
IEGTADDEEEGVPTEEAIRAGLELLKVLSFTHPVSFHSAETFESLLGCLKMDDEKVAEAA
LQIFKNTGSKMEESFPHIKSVLLPVLQAKAKRGPPRQAKYAIHCINAMFTNRDTHFAQIF
EPLHKGLDTANLEQLITPLTTLGHLAQLAPEQFAAPLKSLVANFIVKDLLMNDRIPGKKT
TKLWVSDEEVSPETLAKIQGIKLMVRWLLGVKNNQSKSGNSTLRMLTAILHSDGDLTEQG
RMGKPDMSRLRLAAACALLKLAQEPCYHEIITLEQYQLCALVINDECYQVRQCFSQKLHR
GLCRLRLPLEYMAVFALCAKDPVKERRAHARQCLVKNVNIRREYLKQHAAISDKLFSLLP
EYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEALWFVLEIIMAKNENNSHAFIRKMVENIK
QTKDAQAPTDVKTNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPSSFFTKPDKNFSNT
KNYLPPEMKSFFTPGKPKSANVLGAVNKPLASAGKQIQSKSSRMETTSNDDPSSNPSSPQ
RSKIRHDSKEMDHSENEDFSLKRADSTDKDIEKPRGRKRGVASSDDQDSKPKRGRKKAVA
NTTVTAVEAEDQWDEDTRPEDEQNSPPKKRRGRPPKSAASQDTPAKGKRGRKKAAPPPEN
NDEEEEEEEEEEDKVEEEAATAEEEEEEDNRSSENLEVKTKGGRQTRTPRRSQGTESTEA
TPQKRRGRPPKSAQPPAKKPARGGRSKAAAAKEDSEEDEEEEEEEEEEEEEGEQRDEGEP
TPKGRKKAAGRRR
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagccgtggacgcgaaggtgacctaccccccgggggtcaaa
gagatatctgacaaaatctccaaagaggaaatggtccgcagactgaagatggttgtgaaa
accttcatggacatggaccaggactctgaggaggagaaggagctgtacctgaacctagcc
ctccacctggcttcagacttcttcctcaagcacccagacaaggacgtgcgtctgctggtg
gcctgctgtctagcagatatattcaggatttatgccccagaggcgccgtacaccttccca
gaaaaactcaaggacattttcatgttcatcaccagacagctcaaaggactggaggacacg
aaaagtgcccagttcaacagatacttctacctgcttgagaacatagcatgggtgaagtcc
tacaatatttgctttgagctggaagacagcaatgagatattcacccagctttacagaaca
ctcttccaggtcatcaacaacgggcacaaccagaaggtgcacatgcatatggttgaccta
atgagctccatcatctgcgagggagacactgtgtcgcaggagctgttggacacggtgttg
gtcaacctggtgccggcacacaagaatttgaataaacaagcgtatgacctggccaaggct
ctgctgaagaggactgctcaggctattgaaccttacatcaccaatttcttcaaccaggtg
ctgatgctgggaaagacgtccgtcagtgatctgtcggagcacgtttttgacctaatcttg
gagctttacaacatcgacagccacctgctgctctctgtgctgccacagctggagtttaaa
ctcaagagtaacgataatgacgagaggctgcaggtggtgaagctgctggctaagatgttt
ggagccaaggactcgnagttggctgcacagaacaaaccactctggcagtgttacctgggc
aggtttaatgacatccacgtgcctatcagactagagtgcgtcaagttcgccagtcactgt
cttatgaatcacccagacctggccaaagacctcacagaattcttaagggtcaggtcacat
gacccggaggaggccatccgccacgatgtcatcgtctctatagtaactgccgccaagaaa
gacttgtcgctcgtcaacgacgcgctgctcaactttgtgaaggaacgaacgttggacaaa
agatggcgtgtgcgcaaggaagccatgatgggcctcgcatcaatctacaggaagtactcg
ctgncaggagaaggagggagagaggcctctaaacagatttcctggatcaaagacaagctg
ctccacatctactaccagaacagcatcgatgacaggttgctggtggagcgcgtctttgct
cagtacatgnnttcctcacaactggagacctccgagaggatgaagtgtctttattacctc
tacgccaccctggacacaaatgccaaatgctgtcaaagagacatcaccaaaaagctcggc
agtcccaaacagccgagcaatccgttcctggaaatggtcaagttcctcctggagagaatt
gctcccgtacacatcgacacagagtccatcagcgcactgataaaacaagtaaacaaatct
atagagggaacggctgacgatgaggaagagggcgttcccacagaagaggccatcagagcg
ggactggagctactgaaggtgctgtcgttcacacatcccgtgtcgttccactcggcggag
acgttcgagtctctgctgggatgtctgaaaatggatgacgagaaggtggccgaggccgcg
ctgcagatcttcaagaacacgggcagcaagatggaagagagtttccctcacattaaatct
gttttactaccggtactgcaggccaaagccaagagaggcccccctcgccaggctaagtat
gcaatccactgtatcaatgccatgttcaccaacagagacacacacttcgcccaaatcttt
gagcctctgcacaaaggtctggacacggcgaacctggagcagctcatcactcctctgacg
acgctcggccacctggcccagctcgccccggaacagtttgcggcgccgctcaaatcgctc
gttgccaacttcatcgtgaaggatctgctcatgaatgaccggattccgggcaaaaagaca
accaaactctgggtttctgatgaggaagtgtcccccgagactctggctaagatccagggc
ataaagctgatggtgaggtggttgctgggcgttaagaacaatcagagcaagtcgggcaac
tccaccctgaggatgctgacggctattctacacagtgacggagatctaacagagcaggga
cggatgggtaaaccagacatgtctaggctgcggctggcggcggcatgcgccctcctgaag
ttggcacaggagccgtgctatcatgaaatcatcacgctggagcaatatcagctgtgtgct
cttgtcattaatgacgagtgctaccaggtgcggcagtgtttttcccagaagctccaccgc
ggcttgtgccgcctccgtctgcctctggaatacatggcggtgttcgctctgtgcgccaag
gaccccgttaaggagcggagggctcacgctcgccagtgcctggtgaaaaacgtgaacata
cgcagagagtacctcaaacagcacgcggccatcagtgataagctgttctctctgctgccc
gagtatgtggttccttacacgatccacctcctggcacatgacccagactacgtcaaagtg
caagacatcgagcagctaaaagaaatcaaagaggctctgtggtttgttctcgagatcatc
atggccaagaacgagaacaacagccacgccttcatcaggaaaatggttgaaaacatcaaa
cagacgaaggacgcccaggcccccactgatgtcaaaacgaacgagaagctctacacggtg
tgtgatgtagccatgaacattatcatgtcaaagagcaccacctacagcctggagtcccca
aaagaccccgtgctgccttcgagcttcttcaccaaaccagacaagaatttcagcaacaca
aaaaattatctaccgcccgagatgaagtcgttcttcacaccaggaaagcccaagtcggcc
aacgttctgggcgcagtgaacaagccgctggcgtcggcggggaagcagatccagagcaaa
tcttcgcggatggagacgaccagcaacgacgacccctcgtcaaacccaagttccccacaa
cgcagcaagattaggcatgacagcaaagaaatggatcacagtgaaaacgaggacttcagc
ctaaagagagccgacagcactgacaaggatattgaaaagccccgcggtcgcaaacggggc
gtggcttcatctgatgaccaggacagcaaaccaaagcgcgggcgcaaaaaggcggtggcc
aacacgactgtgacggcggtcgaggccgaggaccagtgggacgaagacacccggccggag
gacgagcagaacagcccgccgaaaaaacgcagaggccggcccccgaaatccgccgccagt
caggacacacccgccaaggggaagagggggcggaagaaagcggctcctccgccagaaaac
aacgacgaggaggaagaggaggaggaggaggaagaggacaaggtcgaggaggaagcagca
acggcggaggaggaggaggaagaggacaacaggagcagtgagaatctggaggtgaagacc
aaaggaggaagacaaacaaggacaccgcggcggtcacaaggcacggagtcgacagaggcc
acaccccagaagagaagaggacgtccacccaaatcagctcagccgcctgccaagaaacca
gcgcgtggcgggagatcgaaggcagctgctgctaaagaagactctgaagaggatgaggaa
gaggaggaggaggaggaggaggaggaggaggaaggggagcagagagacgaaggcgagcca
acaccgaagggtcgcaagaaggcagcggggcgaagaagatga
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