Solea solea (common sole): 131458710
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Entry
131458710 CDS
T10853
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
131458710 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131458710 (rabgef1)
Membrane trafficking [BR:
ssoe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
131458710 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
131458710 (rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PIN_8
Pneumovirus_M2
CID_GANP
Motif
Other DBs
NCBI-GeneID:
131458710
NCBI-ProteinID:
XP_058483899
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All DBs
Position
4:complement(23894801..23903866)
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AA seq
514 aa
AA seq
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MSQRTERRGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEDAAYASSHGAQPQPQGQSSAPHPGHASLGPFSKFEEKKTNEKTRKVTTVKKFFSP
SSRTPPKKETQEGKTPSPSISRHSSFETDQVSKEFVDFLKNLQRPGREIHKQCRAFIVNM
SSKKDLSAEELSECVQDFYQNMADRLMSHYKGSSESVEQVMDQVEKYIMTRLYKGVFCPE
TSDDERKDLVTQNRIRALHWVTIQMLCVSMDEEIPEVSENVVKAITDVIEMDSKRVPRDK
LACITRCSKHIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCNPSRL
MTGEDGYYFTNLCCATAFIEKLDAQSLNLSPEEFERYMSGQASPRLHSSEGDWALAGSAP
DATATATTNPVLVQLNQNLELLSGLISKQERVTEAAQSLQADLLSWPQSVEREVHGVLEK
YPLEIAPRIVSAIDANNVDNDNLPPPLTPQVFAG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggacggagcgacggggcatacatgtggaccaatcagacctgctgtgcaaa
aagggatgcggttactacggcaacgcagcttggcagggtctgtgctccaagtgctggagg
gaggagtaccagagggttcggcagaaacagatccaggatgactgggctttggcggaaaag
ttgcaacgagaggaggatgcggcgtacgcgagtagccatggagctcagccgcagccccag
ggccagtcctcggcaccacacccaggacacgcctctctgggccccttctccaagtttgag
gagaagaaaacgaacgagaagacgcgaaaagtgaccacggtgaagaagttcttcagcccc
tcatcacgcactcctcccaagaaagaaacccaagagggcaaaacacccagtccgtccatt
agccgccacagcagctttgaaacggaccaagtgtccaaggaatttgtggacttcttgaaa
aacctgcagcggcccggccgggagatccataagcagtgccgcgccttcatcgtgaacatg
tccagcaagaaggatctcagtgctgaagaactctcagagtgcgttcaggatttctaccag
aacatggccgaccgcctgatgagtcattataaaggctcatcagagtccgtggagcaggtg
atggaccaggtggagaagtacatcatgacccgtctttataaaggcgtcttctgtccagaa
accagcgacgacgagaggaaggatctggtcacacagaaccggatacgggctttgcactgg
gtgaccatccagatgctgtgtgtgtccatggatgaagaaatccctgaagtgtcggagaat
gtggtcaaagcaataacagatgtgatagagatggactctaagagggttccccgggacaaa
ctggcgtgcatcacgcgctgcagcaaacacatcttcagcgcgataaggatcacgaagaac
gagccggcgtcggccgacgacttcctccccgcgctcatttacatcgtgctcaaggccaat
cctccgcggcttcagtccaacatccagtacatcacacgcttctgtaacccgagcagactg
atgaccggagaggacggatactacttcactaacctgtgctgtgcgaccgccttcattgag
aagttggacgctcagtctctaaatctgtccccggaggagtttgagcgttacatgtcggga
caagcgtcgccacgtctccacagctcagagggcgactgggccctcgccggctccgccccc
gatgcgaccgccactgccaccaccaacccggtcctggttcagctcaatcagaacctggag
ctgctgtcgggcctcatcagcaaacaggagcgcgtgacggaggcggcgcagagcctgcag
gccgacctcctctcctggcctcagagcgtggagcgcgaggttcatggtgtgctggagaaa
tacccgctggagatcgcgccccgcatcgtttctgccatcgacgccaacaacgtggacaac
gacaacctcccgccaccgctcacaccacaggtgtttgctgggtaa
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