KEGG   Solea solea (common sole): 131458880
Entry
131458880         CDS       T10853                                 
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe04140  Autophagy - animal
ssoe04142  Lysosome biogenesis
ssoe04148  Efferocytosis
ssoe05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    131458880 (vps11)
   04140 Autophagy - animal
    131458880 (vps11)
   04148 Efferocytosis
    131458880 (vps11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    131458880 (vps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssoe04131]
    131458880 (vps11)
Membrane trafficking [BR:ssoe04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    131458880 (vps11)
   Hops complex
    131458880 (vps11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C Clathrin VPS18_solenoid_2nd zf-C3HC4_2 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st zf-rbx1 zf-C3H2C3 zf-RING_2 Beta-prop_IFT122_1st zf-C3HC4 zf-RING_5 ADIP Beta-prop_EML_2 TPR_GEMI5 zf-ANAPC11 zf_RING_Vps8_fungal Beta-prop_VPS8 Rab11-FIP3 zf-RING-like Glyco_transf_10 Beta-prop_HPS5 Rv0250c Kbp-5 DUF4337
Other DBs
NCBI-GeneID: 131458880
NCBI-ProteinID: XP_058484183
LinkDB
Position
4:18702408..18710738
AA seq 926 aa
MAAFLQWRKFVFFDKDTAKDPVDNGKNFVLPNGISACDSGRGHIVLGDMDGKIWLMTRSL
QLTFFQAYKLRVTHLYQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPPCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGSSPVTGLAFR
QMAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCALRCSSLTDPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGQKLFAHWHRGYLFLLIRDAKSPNKSGFGSRESSPSDKQLLTIYD
LDNKFIAYSASFDDVVDVVAEWGSFYILTRDGQMFILQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHNYAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESTMKHYGKTLMHHV
PEGTTLLLKGLCTNYQSSGDGGDKGSEEKRRINKANSEEFIPIFANNPRELKAFLEHMIE
VDPRSPQGVYDTLLELRLQDWAHEQVPERKKVLQGEAVSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
AYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRETQQIEDDERKIRQ
YREDTAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPDNRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
LPGNKTVGGLEVNLQRDLLIHTKRNS
NT seq 2781 nt   +upstreamnt  +downstreamnt
atggcagccttcctacagtggaggaaattcgtcttttttgacaaggacacggcgaaggac
ccggtggataatgggaaaaactttgttcttccaaacggaatctcggcctgcgactccggc
cgcggacacattgtcctcggtgatatggacggcaagatctggctcatgacacgctccctg
cagctgacgtttttccaggcctataagttgcgtgttacacacctttaccagctgaagcag
catagcatccttgtgtcagtggggcaggatgaacaaggaataaatcctttagtaaaagtc
tggaaccttgataaaagagacagtggaaatcctccctgcacaaggatttttcctgcgatt
cccggtaacaaacctactgaagtgtcttgcctcagtgtgcacgagaatctcaacttcatg
gcaattggcttcacagatggcagtgtggttctgaccaaaggggacatcaccagggatcgt
cacagtaaaaccttgactctgcatgagggaagcagcccagtcactggcctcgccttccgc
caaatggcaaaggtcacacatctgtttgtagccactctggagaaggtccattgctacacg
ctgtccattaaggagtaccctaaagtagagctggatacacacggctgtgcactgcgctgc
tcctccctgacagatccctcccaggattcccagtttattgtcgccggtgatgagtgcgtc
tacttgtatcagcctgatgagcgaggtccctgctttgcctttgatggacaaaagcttttt
gcccactggcaccgtggatatctttttttactcatcagggatgcaaagtcacccaacaag
agtgggtttggtagcagagagagctctccgtctgacaaacagcttctcaccatctatgac
ctggacaacaagttcattgcctacagtgcctcttttgatgatgtcgttgatgttgtggcc
gagtggggctccttctacatcctgacccgagatggacaaatgttcattcttcaagagaaa
gacacgcagaccaaacttgagatgctctttaaaaagaacctatttgtgatggccataaac
ctggctaagagccagcacctggacagtgacggactgtcagagatcttcaggcagtatggt
gaccacctctaccttaaaggggaccacgatggtgccatacagcagtacattcgcaccatt
ggaaaattggagccatcatatgtgattaggaaattcctggacgcgcagaggatccacaat
ctgacggcatatctacaagccttgcacaggcagtcgctggctaatgctgaccatactaca
ctgctcctcaactgttacactaaactgaaggacagctccaagctggaggagtttattaag
agtagtgaaagtgaagtgcactttgatgttgagatcgccatcaaggttctcaggcaggct
ggctaccacaattacgccgtcttcctggctgagaaacacatgcaccacgaatggtacctg
aagatccagctggaagaccttaagaactaccaggaaggactgcgctacattggacgtctg
ccttttgaacaagctgagagcaccatgaagcattacggcaagacactgatgcaccatgtc
ccagagggcaccacgttgctcctgaagggcctgtgcaccaactaccaatcaagcggagac
ggtggagacaaagggagcgaggagaagaggcggatcaataaggccaactccgaggagttc
atcccaatctttgcaaacaaccctcgggagctgaaagccttcctggagcacatgattgag
gtggatccccgttctcctcagggagtgtatgacacgctgctggagctccggctgcaagac
tgggcccacgaacaggttccagagaggaagaaggtcctgcagggagaagcggtgtcactg
ctgaggagtgacaacaccgtgtttgacaaggccctggtcctctgccagatgcacaacttc
aaagaaggcgttctctacctttatgagaagggcaaactgtaccagcagattatgcactac
cacatgcagaatgaggagtatggaaaagtggtcgaggcctgcaaacgctatggggaccag
gagggctgtctgtgggagcaggcgctgggatactttgccagaaaagaagaggactgcaag
gcttacatcagtgaggttctacatcatatcgaccaaaacaacctcatgcccccattactc
gtggtgcaaacactggcacacaactcgacggccacgctctccgtcatcaaggactacctc
attaacaagctgcagagggagacccaacagatagaggacgacgaacgcaaaatccgccag
taccgcgaggacacggctcaccttcgctccgagatccaggagctcaaaacaagcgccaaa
atcttccagaagacaaagtgcaacatgtgcaacagtcccctggagctgccctcggttcat
ttcctgtgcagccactccttccaccagcactgcttcgaaagctatgcagagagtgaggcc
gaatgtccgacgtgcacgccggacaacaggaaggtcatggacatgctgcgtgcgcaggac
cagaaacgggacctgcacgaccacttcaacagacagttacgcagctccaacgacggtttc
tcggtggtggccgactactttggtcgaggcgtgtttaacaaactgactctggtcactgac
ctgcctggaaataaaacagtcgggggtcttgaagtgaacctgcagagggatctcctcatc
cacaccaagaggaacagctag

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