Solea solea (common sole): 131459097
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Entry
131459097 CDS
T10853
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04350
TGF-beta signaling pathway
ssoe04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
131459097 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
131459097 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssoe04515
]
131459097 (neo1a)
Cell adhesion molecules [BR:
ssoe04515
]
Immunoglobulin superfamily
DCC/UNC5 family
131459097 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
NDNF
fn3_SORL1
fn3_2
Ig_Rha78A_N
Tissue_fac
C2-set_2
Sp38
V-set_CD47
EphA2_TM
DUF4834
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
131459097
NCBI-ProteinID:
XP_058484507
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All DBs
Position
5:complement(12323306..12476454)
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AA seq
1509 aa
AA seq
DB search
MAERGALSLLSLLCLTFLYTASSTAKHVDKGSAAQPFIPFWFTVEPQDTLAIRGNSAMLN
CSAHSDAATPARVEWKKDGTFMRLISDERRHILPDGTLVFTHVVHSKHNKPDEGTYQCVA
TIENHGSISSRTARLSVAGMPRFASQPAPSTVRPGDSQVMACEVNSDLVPFTRWEKDRQS
LELSSRLTQLPSGALVIRNASEADAGLYRCLVENVGSSKSSDEAQLQIVPETGEDRKLEF
LVQPVSVTKMVGTSVLLPCVVTGFPVPQVRWMLGDKLLQESEGHVEVMGGDSLQISNITE
KNAGVYTCIADNSNATIEAQAQLTVQVAPQFVRRPANIYAHESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPSFPPPSLTPNTTDHVTPGSGGIAGPAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDDLTYSVFYSTEGISRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGQGETSAA
LKVATQAEVQVPGPAPNLQAVSNTPTSVSLSWDKPLTGNGEMLTYKLYYTDKSFDSEQDV
DSDGQSYTMTGLKKNTEYSFRVVANNQHGPGVSTEDIVVRTLSDVPSAAPQNLTVEVQNS
KSIMLRWQPPPLNGQNGEITGYKIRYRKGPRRSEAAETTGGTQLNKLIDGLDRGTEYSFR
VSAMTVNGTGPATDWNSAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYSIGYGIGSPHAQTIKVDYKQRYYTIENLDASSHYVITLKAFNNVGEGIPVYESAITR
PQSDPVDPDVDMYELFHASYTPVPDPSPMMPPVGVQASVLSYDTIKVTWADNSLPKNQRI
TDNRYYTVRWKTNIPANTKVKMANTTSLNYMVTGLKPNTLYEFSVMVTKGRRVSTWSMTA
QGTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDW
VIEPVVGNRLTHQIQDLTLDTTYYFKIQARNSKGMGPMSDAVNFRTPKTESSDKMANDQA
SNLPSKPGPSGNQQPPDPGTSVGKSGVGSSENHILVIIIIISVGAFTIIVVVVGAFLCTR
RTTSHQKKKRAASKSTNGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTETP
IPRSSQDITPADSGLDGNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDTQPPQ
PVISAHPIHSLDNHHHHYHMGSLASPTRSYLYHQGSGHPRPHACATPISHFDRVDSTESV
RNTPISEPLPPATTSSQVSCPSEILADPEGSYHGSTTTEEEPSYSSNLPPLRSAHPHAHA
HPLKSFAVPAIPATSHPSYESLALPSTPLLTQTGLPTHPHVVKTASIGTLGRTRTPMIVN
VPNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQNYEPDELTEEMAHLEGLMK
DLNAITTAP
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtcgctcctctctctcctctgtctcacctttctctacacg
gcgtcctccacggcaaagcatgtcgacaaaggttcagcagcgcagcccttcatccccttc
tggttcacggtggagccacaggatactctggccatccggggcaactcggcgatgctgaat
tgctcggcccacagcgacgccgccacacctgcgcgcgtggaatggaagaaagacggcacc
ttcatgcgcctgatttcagacgagaggcggcacatacttcccgatggcacactggtcttc
actcacgtggtccactctaaacacaataaacccgatgagggcacctatcagtgcgttgcc
acaatcgaaaaccatggatccatttccagccgcacggcacgcctgtctgtagcagggatg
cccaggttcgccagccagcctgcaccgagcactgtgcgtccaggggacagtcaagtaatg
gcgtgtgaggtcaactcggaccttgtgccctttactcggtgggagaaagatcgacagtcg
ctggagctcagcagcaggttgactcagctgccaagtggagccttggtgatcaggaatgcc
tcggaggctgacgctggcctctaccgctgtctggtggaaaatgtggggtcatccaagtct
agcgatgaggcccaactccaaatagtgccagaaactggagaggacaggaagctggagttc
ctggtgcagccggtttctgtgaccaagatggtgggcaccagcgtcctgctgccttgcgtg
gtcactggtttccctgtgccacaagtccgttggatgttgggagacaagctgctgcaagaa
agcgagggtcatgtggaggtcatgggaggagacagtctgcagatctccaatatcacagag
aagaatgctggcgtctacacctgcatagctgacaactctaatgccaccatcgaagcccag
gcccaactcacagtacaagttgctccacagtttgtcagacgaccagccaacatttacgcc
catgagtccatggacatcgtctttgagtgtgaggtttcaggctcgccggctcccactgtc
aaatgggtcaagaatggagatgctgtcatacccagtgactactttaaaatagttaaggag
cacaacctgcaggttttgggtctcgtcaagtcagatgagggtttttaccagtgccttgca
gaaaatgatgctggcaacatccagtccagtgcccagctcatcatcttggatcacgatgta
gccctgccctctttccctcccccttcactgactcctaacactactgaccatgtaacgcca
ggctccggaggtatagccggtccagcggggcccactccctctgcccctcgagacgtcgtg
gcttcactggtttccacccgcttcatcaaactgacctggcgccaaccagctgaaccacat
ggagacgacttaacctactcagttttctacagcacagagggcatcagcagggaacgtgtg
gtgaacaccagccgtccaggagagatgcaggtcaccatccagaacctcatgccagacacc
aagtaccgcttcagggtcgtagcacacaacagtaacggccaaggagagacttctgcagcg
ctcaaagtggccacccaggctgaagtccaagtgcctggccctgctcctaacctgcaggca
gtgtcaaacacaccaacgtctgtctctctgagctgggacaaacctctcactggcaatgga
gaaatgctcacgtacaagttgtactacacagacaaaagcttcgacagcgaacaggacgtt
gacagtgatggtcagtcctacaccatgactgggctgaagaagaacacggagtacagtttc
cgtgtggtggccaacaaccaacatggtccaggtgtctccactgaggacattgtcgttcgc
accctgtccgacgttcccagcgctgctccacaaaacctcactgtggaggtccagaactca
aagagtataatgcttcgctggcagcctcctccccttaatggccagaatggggagatcaca
ggctacaagatccgataccggaaagggccacggaggagtgaggcagccgaaaccaccgga
ggcacccagctcaacaagctcattgatggtctagaccgtgggaccgagtactccttccgt
gtgtctgccatgacggtgaacggcacaggacctgccactgactggaacagtgccgagacg
tttgagagcgacctggatgaatcacgtgtaccggaccagcccagctctctccatgtccgg
cctctggtcaacagtatcgtcgtgagctggacgccaccagagaaccaggacatcgtggtg
cgcggttactccatcggctacggcattggcagtcctcacgctcagactatcaaagtcgat
tacaagcagcgctactacaccatcgagaacctcgacgccagctcccactacgtgatcaca
ctgaaggccttcaataatgtgggtgaggggattcctgtgtacgagagcgccatcaccaga
cctcagtcagaccctgttgaccccgatgttgacatgtatgaactcttccatgcttcatac
accccagtaccagacccctctcccatgatgccacccgtgggtgttcaggcctctgtgctg
agctatgacaccatcaaggtgacctgggccgacaactcactgcccaaaaatcaaaggatc
actgacaatcgctactacacggtacggtggaagaccaacatccctgccaacaccaaagtg
aagatggccaacaccaccagcctgaactacatggtgactggtctgaagcccaacacgctg
tacgagttttccgtcatggtgaccaaaggccggcgcgtcagcacgtggagcatgactgca
cagggcacaacatttgagaccatccccagctcgtcccctaaagacgtgaccgtcgtgagc
aaagagaacaaacctcgcaccatcatcgtgaactggcagcctccctcggaggccaacggg
aagatcaccggctacattatctactacagtacagatgtaaatgctgaggtccacgactgg
gttatagaaccagtggttggcaaccgtctgacccatcagatccaggacctgacgctggac
accacctactacttcaaaatccaggcccgcaactcaaagggcatgggccccatgtctgat
gctgtgaactttcgcactccaaagactgagtcctctgacaaaatggctaatgaccaagcc
tcaaatcttccatcaaagccggggccttcaggcaaccaacagccaccagaccctggaact
tcagttggtaaatcaggtgtgggaagcagtgaaaatcacatcctggtcattatcatcatc
atctcagtgggagctttcaccatcatagtggtggtggtaggtgccttcctgtgcacacgg
cgcaccacatcccaccaaaaaaaaaaacgagcagcctcaaagtccactaacggctcccac
aaatataaaggaaactccaaagacctgaaacctcctgatctttggattcaccatgagagg
ctggaacttaaacccattgataagtctccagagcccaacccagtaatgactgaaactccc
ataccccgcagctcacaggacatcacgccggctgacagcggcctggacggcaatcctcac
ttacagcagaggcgcaactcctaccgtggccacgagtcagaggacagcatgtctacacta
gcaggccgccgagggatgaggcctaaaatgatgatgccttttgacacacaaccacctcag
cctgtgattagtgctcaccccatccattcccttgataaccatcaccaccattatcacatg
ggcagcttggcatcaccaacgcgaagctacctttaccaccagggtagcgggcacccacgc
cctcacgcctgcgccacccccatctcccattttgacagggtggattctacagagtcagtg
agaaacactcccatctcagagcctctccctccagccaccacctcctcccaggtctcctgc
ccctcggagatccttgctgaccccgagggaagctaccacggctccaccaccacagaggag
gagcccagctactccagcaacctgcccccactccgctcagcacacccgcacgcccacgcc
cacccactcaaaagctttgcagtgccagcaatcccagcaaccagccatccatcatacgag
tccctcgctctacccagcactccactgcttactcagactggacttcccactcacccccac
gttgttaaaacagcctccatcggaacactcggaaggacacgaaccccaatgatagtcaat
gtgcccaatgcccctgatgtgccagagaccagcaagatgctcgaagatgtagacagcgtg
cttgccagcctccccccctgcccttcccccgccccccgcagtaaccctgttcctctccct
cagaactacgagccggacgagctgaccgaggagatggcccaccttgagggcctgatgaag
gacctaaacgccataaccacagcgccatga
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