Solea solea (common sole): 131459257
Help
Entry
131459257 CDS
T10853
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131459257
Membrane trafficking [BR:
ssoe04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
131459257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
131459257
NCBI-ProteinID:
XP_058484800
LinkDB
All DBs
Position
5:complement(76030..118058)
Genome browser
AA seq
1947 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKLLDQEIHFDDVCHKTAKPKAPVTDVALVIRSMGEEVP
PGFTCIETTPSGHSADLNNGGLMAPQIFLCYRRGCDKPPLTDLGVLLEWKERLKQGCHLI
QTTPSGRAANISGNSSQRIYVTYRRAPESQPHATLAVTDVCIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPENTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDQQLSQLGLQSLDPHK
PSPSNNLVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHALPIEKHISHFMHKVPFP
SSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQNLGPENAVTLLVFAVTEHKIL
VHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYD
PPPDVSCVDLDTNTIFHNEDKRVLTWKILPKKACKNLMNVLSHLYQQLVDGQHRPDGLLE
LSMSDSSELSCGKSIHTLELEIQEAFLRFMAAILKGYRSFLRPITQAPSEKATDHSSLFD
LQGFLKSRDRSHQKFYSQMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLYNSERNAD
KGSKTDSERPEESRLIEFDESQRSEHTVFITPPELPPSPEGEEHPLCYRYDGFPVLSVDL
FDPVEGLRTPSSRLTARHSCPTSPAPMFRRTKQEVKLAQRIAKKYSSIPQLWSKCLLRHC
YGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVCYRVLMQLCGQYGQPVL
AVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKLRNVILGVAQFKRAL
RRQALHTHSPLSDGSDLDAVSHGSMDSSAEQGPCTTDPVKVKPTDDRSSTGDQSDLGYNS
LSKEEVRRGAPGAQDTAPDKDYKKESDSSSLSETESAKGSKDCLPQLDMEVHSSFRPRGI
VRSSFTYNDPSCRPRSSASTGHVAGLLFTSSLDEIGEVQTNSLLRRHRSALEEVVGSALD
WQGVRGRRLSGDSTPAAVLGLTMSQGETDPDKIAGHLGADVKILSGAKFGNSKRPGPLAL
GRLDGAAAQVGTHRQEEEEMDGQDSSDEDRSNTEAIFDLEDLDLEKPALRPSASNHHTNK
LQKKVVERSASCSTMSTVTCRGAVQRTGIETGYDPLSLLAAETQSEEQNSGDEVSTPSTR
RHLAREIELYMNHMGSPLSSRTPSLDLQDLISPLLFPPSSNSAPRRASLPHSSPVRTAGV
PHSRTYQPPSPSPSISRRRLLSSPPCRSSSTTPSPSPQPSPCRERTDHTSLASPSPSSSS
FGLDTLLTPTLDVFKTSVFSASKGVAEKASRWYSRLSTYTTPTKDGHSDRFSATSVGMGD
ADCSSLLDEDNGGDSESSVVPPQKNRSPRRSPRRSPRRSPRRSPRRSPFCSRLDSPTAGS
SQMRPTSLLPDKSDLASSQYTSSTSIFNNYAMELLISSCSRCKTCDCLVYDEEIMAGWTA
DDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPSVDEAMTSSYSASTGLDTGTS
TLSTPCPTTAVSPPSPTIAVHDCVGSGRTHGIHIPTEHRGILSPGATLARSISASGPLEE
LLQPNHCVPTSGSLPSRLNETSDPLNMEWRLHNPEPVTIPYLSPLVLWKELESLLENEGD
AVITEADMVDHHPIIYWNLVWYFRRLDLPSNLPGLILTSDHCNRDSQVPRHWMSEDSKHV
LIQILWDNLKLHQDPIQPLYILWNTYNVGYPVSRLVPEQEKPFSEELLQSVVKSIQRNDV
SRPMTQLLQLLGQTLGVKRQRSLYRDVLFLSLVALGKDNIDIDAFDREYKLAYDRLMPSL
VKLTHNCDRPPSAGVMECRRMFGEPYL
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgattactttgtggtggctggtctgacagat
ccgtccaagctgctggaccaggagatccactttgacgatgtctgccacaagacagccaaa
cccaaagcacctgtcacagatgtggctttggtcatccgttccatgggtgaggaagttcca
cccgggttcacttgcattgagacgacaccaagtggccattcagctgatcttaacaatggt
ggcctcatggcgccccagatcttcctgtgctacagacgaggatgtgacaagccaccactc
actgacctgggagtgttgttggagtggaaggagcgactgaagcagggctgccatctcatc
cagaccacaccctccggccgtgcagccaacattagtggcaattcctcacagcgcatctat
gtcacttatcgtcgagcgcctgagagtcagccacatgccaccctggccgtcactgacgtc
tgtatcatcatcccgagcaagggagagactccgccccacaccttctgtaaggtggagaag
aatctcaacagcagcatgtggggctcgtctgtctacctgtgttataagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttatttagtagatatccagaagaggactac
gagtcgttcccactgcctgagtctgtgcctctcttctgcctccccatgggagccacaatc
gagtgttggcccgaaaacaccaaatactccctccctgttttttccacctttgtcctcact
ggagcctctggagagaaggtgtacggtgctgccatccagttctatgagccctatccacag
gagtgcctgactgatcagcagctctctcagctgggtctccagagcttggatccacacaaa
ccgtccccctctaataacctggtttataccaacaagtgcatctgtctgctctctcactgg
cccttctttgatgcttttcgcaagttcctcacattcctctaccggtactccatctctggc
cctcacgccctgcccatcgagaaacacatctctcattttatgcataaagtcccatttcct
tcctctcagaggcctcgcatcctggtgcagctttctcctcatgacagcctgatgttgagc
cagcctgtgtcttctcctttaccgctcagtggtggtcgattttccacactgctccagaac
cttggacctgagaatgccgtcaccctgctggtgtttgctgtcactgaacataagatcctg
gtccactcactgcgaccggccgttctgaccagtgtcactgaagctctggtgtctatgatc
tttccattccactggccgtgcccgtatattcctctgtgccccctggcattggctgatgtg
ttgagcgccccctgtccttttattgtaggagtggattctcgctattttgatctgtatgac
cctccaccagatgtgagctgtgtggacctggacacaaacaccattttccacaatgaagat
aagcgagtgctcacatggaagatcctgccaaagaaagcctgtaaaaacctgatgaatgtg
ttgagccacttataccagcagctggtggacggtcagcacagaccggatgggctgctggag
ctgagcatgagtgactcatcagagctgagctgtgggaagagtattcacactctggagctg
gagatccaagaggccttcctacgcttcatggcagccattttgaagggctaccgttcattc
ttgcgaccgatcactcaggcaccgtctgagaaagccacagatcacagttcactgtttgac
ctgcaaggtttcttgaagagccgcgaccgctcacaccagaagttctactctcagatgaca
aagacccagatgttcatccgcttcattgaagaatgctcttttgtcagtgacaaagatgcc
agcctggccttctttgatgactgcgtggacaaactctacaattcagagcggaatgcagac
aaaggaagcaaaacagacagtgagaggccagaggaatccaggctcatagagtttgatgaa
tctcagcgcagtgagcataccgtcttcatcacgcctccagagctgcctccctcacctgaa
ggggaggaacatcctctctgctacaggtacgatggtttcccagtgctgagtgttgacctg
tttgaccccgtggaggggctgcggaccccctcctcccgtctcactgccagacacagctgc
cccaccagccctgctcctatgtttagacgtaccaagcaggaggtgaaactggcccagagg
atagctaagaagtactcgtccatccctcagctgtggtccaagtgtctgctgcgtcactgt
tatggtctgtggttcatctgtctgccagcgtatgttaaagtttgtcattccaaggtgagg
gctctccgcactgcttatgacgtcctcaggaaaatgcaggcaaagaagttgcagccccct
gatgaggtctgctatcgtgtgctgatgcagctgtgtggacagtatggtcagcctgtctta
gcggtcagggttctctttgagatgaagaaggctggagttcatcctaacgccatcacgtac
ggctactacaacaaggcggtgttggagagcacctggccatccagcaccagaggaggatac
ttcctgtggatgaagttaagaaacgtgattttgggagtggcacaattcaaacgagcttta
cgacggcaggccctccacacccacagccctttgtcagatggcagtgacctggacgctgtg
agtcacggcagcatggatagctctgctgagcagggtccctgcaccactgaccctgtcaaa
gtaaagcccactgatgatagatctagcacaggagatcagtcagatttgggctataactca
ctgtccaaagaggaggttcgtagaggggcccccggtgcccaggacacggcccctgacaag
gactacaagaaggagagcgacagcagctccttgtcagagacagagagtgcaaaaggaagt
aaagactgccttcctcagctggacatggaagtccattcctctttcagaccacgtggcatt
gttcgcagcagcttcacttacaacgatccgtcctgcagacccaggagctctgccagcaca
ggccacgtcgccggtctcctcttcacttcctccttggatgaaatcggtgaggttcaaacc
aacagtcttctcaggagacaccggagtgctctggaggaggtggtgggctcagccctggac
tggcagggtgtgaggggccgtcgtctgagcggagactccactcccgccgctgtcctcggc
ctgacgatgagccagggtgaaactgacccagacaagattgccgggcacctgggtgccgat
gtgaaaattctctctggtgccaaatttggtaacagtaagagacctggtccactggcgtta
ggcaggttagatggtgctgctgctcaggtaggcactcacaggcaagaagaagaggagatg
gatggacaggactctagtgatgaggacagaagtaatacagaggccatttttgatttggag
gatctggatttagagaagcctgctctgaggcctagtgccagcaaccatcacaccaacaaa
ctgcagaagaaagttgtggagcgcagtgctagctgcagtaccatgagcactgtgacttgt
agaggagcggtccagcgcacgggcattgagacgggctacgatcctctgtcattgctggca
gctgagacacagtctgaggaacagaactcaggagacgaggtcagcacaccgagcacccgg
agacacctagccagggagatagagctttacatgaaccatatgggaagcccactgagcagc
cgcacccccagtctggacctgcaggacctgatcagccccctcctctttcccccctcttca
aactctgccccccgcagagccagcctgccccacagctcccccgtcaggactgctggagta
ccacactcccgcacgtaccaacctccctcaccctccccgtccatttcacgtcggcgcctc
ctgtcatctcctccctgtcgcagctccagcaccactcccagcccgagccctcagcccagc
ccctgcagagagcgcacagaccacacgagcctggcttctccctcaccttcctcttcctct
tttggtttggacactctcctcacaccaaccctggatgtcttcaagaccagtgtgttctct
gcctctaaaggtgttgctgagaaggcaagccgctggtattcacgtctttccacctacacc
acgcctaccaaggacggacacagcgaccgttttagtgcgacgtctgttggtatgggagat
gcagactgttcctccctgctggatgaggataatggtggggactcagagagctctgtggtc
cctccacagaagaacaggagtcccaggcgcagtcccaggcgcagtcccagacgcagtccc
agacgcagtcccagacgcagtcccttctgcagcagactggacagccccactgcaggctcc
agccaaatgagacccacctctctgctccctgacaagtcagacctcgcctcctcacagtac
accagcagtaccagcatcttcaacaactatgctatggagctgttaatctccagctgttct
cgctgtaagacgtgtgattgtctggtgtatgatgaggagatcatggctggctggacagca
gatgactctaacttaaacaccacctgtcctttctgtggaaaccccttcctgcccttcctt
aacgtggagatcagagacatgcgcggacctggcaggctgttcctgaagggcagtccatca
gtggatgaggcaatgacctcatcatactcagcctcaacaggtctggacacagggacgtct
acattgtccacaccctgtccaacaaccgctgtgtccccgccttctcctacgattgctgtc
catgactgcgtgggaagtggaaggacacacggtatccacatccccacagagcaccggggg
atcctgtctcctggagccactctggcccgcagcatcagcgcctctggtcctctggaggaa
ctgttgcaacccaaccactgtgttcccacgtcaggcagcctgcccagccgcctcaatgaa
acctcagatccacttaacatggagtggaggctccacaaccctgagccagtgactattccc
tatctgagcccgttggtgctgtggaaggagctggagagtctgctggagaatgaaggtgat
gcagtaataactgaggctgacatggtggaccaccatcccatcatctactggaacctggtc
tggtacttcagacggctggacctgcccagcaacctgcccggtctgattctcacctcagac
cattgcaacagagattcccaggttcctcgtcactggatgtcagaggacagtaaacacgta
ttgatccagatcctatgggacaaccttaaattgcaccaggatcccatccagcctctctac
atcctctggaacacgtacaatgtgggttaccctgtgtcccggctggtcccggagcaggag
aaaccgttcagtgaagagttgctgcagagtgtggtgaagagcatccagaggaacgacgtc
agtcggccgatgactcagctgctccagctgctgggtcagacgctgggtgtcaagaggcaa
aggagtttgtacagagacgtcctctttctctcgctggtggctctcggaaaagataacatc
gatattgacgcctttgaccgtgagtacaagttggcgtacgaccgactgatgccgagcctc
gtgaagttgacccataactgtgaccgtcctcccagcgcgggggtcatggagtgtcgcagg
atgtttggagagccttatctttaa
DBGET
integrated database retrieval system
