Solea solea (common sole): 131459270
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Entry
131459270 CDS
T10853
Symbol
fn1b
Name
(RefSeq) fibronectin 1b isoform X1
KO
K05717
fibronectin 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04510
Focal adhesion
ssoe04512
ECM-receptor interaction
ssoe04810
Regulation of actin cytoskeleton
ssoe04820
Cytoskeleton in muscle cells
ssoe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131459270 (fn1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131459270 (fn1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
131459270 (fn1b)
04810 Regulation of actin cytoskeleton
131459270 (fn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131459270 (fn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131459270 (fn1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssoe04147
]
131459270 (fn1b)
00536 Glycosaminoglycan binding proteins [BR:
ssoe00536
]
131459270 (fn1b)
04990 Domain-containing proteins not elsewhere classified [BR:
ssoe04990
]
131459270 (fn1b)
Membrane trafficking [BR:
ssoe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
131459270 (fn1b)
Exosome [BR:
ssoe04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
131459270 (fn1b)
Glycosaminoglycan binding proteins [BR:
ssoe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131459270 (fn1b)
Domain-containing proteins not elsewhere classified [BR:
ssoe04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
131459270 (fn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
NDNF
Interfer-bind
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
131459270
NCBI-ProteinID:
XP_058484836
LinkDB
All DBs
Position
5:complement(5098034..5128725)
Genome browser
AA seq
2466 aa
AA seq
DB search
MTGSPLTGLLVALCVSSAVHCVPSKNKRQTGQYRVYPELQDPAALTPVGCEENGRSYRLN
EQWEKPYLGSTLVCTCTVASDIKCKSKPDVVESCYDKYNDRTYQVGETYERPKDGMIWDC
TCIGSGRGKISCTIANRCHEGGRSYKIGDTWQRPHDTADYMLECVCLGNGKGEWTCKPVA
ERCYDTTAASSYVVGETWEKPYQGWMMLDCTCLGEGNGRITCTSRNRCNDQDTRKSYRIG
DSWTKTDASGQFLQCLCLGNGRGEWKCERHNTGRTTGAVAVNPAHTATQKQIDVPVEGTC
RTDSGASYFDEQRWIRTQGNKQMLCTCLGNGISCQEWEARSQVYGGNSDGRPCVFPFVFM
GKTYYSCTSDGRTDGQLWCSTTSDYETDKQYSLCTEKNAIVATRGGNSNGALCHFPYLYS
GRNYTDCTADGRRDNMRWCGTTHNYDGEQRFGFCPMAAHEEVCTTNDGVMHRVNDKWDKR
HDSNGHMMECTCLGNGRGEWSCIAHSQLRDQCIVDSLTYEVNQEFSKRHDEGYMMNCTCL
GQGRGRWKCDALDQCQEPQTRAFYQIGDSWDKAIHGIRYRCSCYGHGIGELRCEPQQTYQ
DGHRPVQVIITEAGKQPDSHPIQWNAPSSVHITQYILKWRIKNAGAAWRETAIPGHLNSY
TIGGLRPGVTYEGQLISLLRYGRREVTRFEFTTTHGSLETSEGETDQPAPVVDTSESVTE
ITSNSFVVSWTSASSTISGFRVEYELSEQGAKPKVLDLPRTVSSVTIADLLPGRRYNVNV
YELPDQGQPNLILTTSQTTAPDTPAQHVIDDVGETSIRISWTRPQAPITGYRVVYTPSVE
GSSTELNLQDTETSVNLVDLRPGLLYNISIYAVEGNRESEPVFVQVNTAGTPPPEEVPAP
TDLQFYEVTDVKITITWAGPPSEVTGYRVIFSPVGTDGTDTRPLQLPISPNAYADITHLQ
PGKLYRFYIYAISGGVESEPLVGQMSTKPDSPSDVRFSDIGPDSALVTWEGPRAVVTGYR
LLLSIEGSNPVEKRIPGRVTQYPLRNLRPDTQYTAILHSELNNDLSEGVTKYFTTAPQMG
NAPVFSTEVTDSAITISWIPVRKFSYRLSVLPSQQGESPREETSDSGRIHIPDLISGNQY
SYTVQPIFNGRNRGNPITRTVVTSVSPPTDLRVESSPNTGDLTVHWDASKTPGVTGYRVT
STPTNGQLGNSLEEFTRADQTSIILENLNLGMEYNISVFATKGHLESVPMSSIITTDIPR
PSHIDFVDITDTTIGLRWTPLNYTAITGYRIMVVTSGQNMPIFQDMVDASAGYYTVHGLE
PGVDYDISLATVTEEGESEPTTYTKQTQAAIPAPTNLQFGGVGPDHIRVTWTVPHVTAPS
DIARFVIRYHPVATDDDIKEVNVGGATNTFLLQNLLPNTDYRISVVCVYAERESEPASGT
QRTTLDSPTGLDFSDIRTNSFTVHWLAPTAVITGYRIRYQKTSGGRAKDERLPPTRNYFT
LTGLTPETEYRIDVYAVNNNQESQPLTGTQATISDAPTDLEVVSSTPTTITIRWDAPSVT
VNNYKITYASTSGETPQEFNIPGTQTTATITGLNPGTDYTITVYAVTARGDSPASNTPVY
ITHKTDIEPPNNMKLTDVSDNALTVRWSPAQGPIRGYRVTSVPKNGRGPSYSEMVAPDKT
QMTFTGLMPTVEYVVSVYALGNDGHPSSPAVENAVTAMDRPKDLAFSDIDSTSMRITWES
PEGTVTSYRVLYSSPEEGERDLRPAPRRDQDSVVLRGLRPGTEYTVKVIALHGHTTSTPL
VGTQATVIPAPTNLLISEVGPTTFTVSWRAPTARLTGYRVVVIPKNINSPTKEMNVAPDT
TRVVVPGLMVATNYQIKVFALKNSVSSRPLEGEVTTLEDVSPPRRVRISDVKDTSFTLSW
RNKIETITGFLIEATPFGSSQPTVSRTIVGETTTYTLAGLQPGTSYSINMYTLNGNTRSA
PFTLTIQTGQPVVQAPSSLRFTSLTPTSISFTWQPPPTQITGYYVTYEESGGAPRELLPR
PHAGQNYATVSGLRPATEYIIKIIAVQNTQRSTPLVGRIRTQPDSLLPLPLPHLPGGADD
KLDVPETDLDNSVQVVGTSGQDALGGQGQNVEYTEFNNNGDNRLNGNSGNPLSPYGQVRE
PLVFVPLPDAEGRRLPILKLNVPVGTTFGNETGVPQEAQTRTSISWEPLRQSSAYLVSCH
PITHLNEKMFQVRLPGTATTATLIGLTPGANYKVLVEALKGALKQKILEQIVTAGNTIPD
GVPSTGDTCYDAFTATHHDVGAEWERMSETGFKLWCRCLGLGSGHFRCDSSKWCHDNGIN
YRIGEKWERHADNGHLMSCTCLGNGKGEFKCEPHSSVCYDDGKTYQVGNQWQKEYLGAIC
TCTCYGGQQGWRCENCRRPGADVDVSLLQPVRYGDNSPHRLNIHCPIECLRPELLADAHV
PQNARE
NT seq
7401 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtagcccactcacggggctgctggttgcgctgtgcgtaagcagcgcagtccac
tgcgtgccaagcaagaacaagagacaaactggacaataccgggtgtatcctgagctccaa
gacccagcggccctcactccagtcggctgtgaggaaaacggtcggtcatacaggctgaac
gagcagtgggagaaaccttacctcggcagtacgctggtgtgcacctgcactgtggcctcg
gacatcaaatgcaaatccaagcctgacgtggtagagtcctgttatgacaagtacaatgac
cgcacataccaggtcggtgaaacctacgagaggccaaaggatggaatgatctgggactgc
acctgcatcggctccggtcgaggcaagatcagctgcaccatcgcaaatcgctgccatgaa
ggtgggaggtcgtacaaaatcggggacacctggcagaggcctcacgataccgccgactac
atgctggagtgcgtgtgtcttgggaatggcaaaggagagtggacctgcaaacctgtggct
gagcgttgctacgacaccaccgctgcatcgtcgtatgtcgtgggggagacctgggagaaa
ccgtaccaaggctggatgatgctggactgcacctgtctgggcgaaggaaacggacgcatc
acgtgtacctcgaggaaccgctgcaatgaccaggacaccaggaagtcctaccgtatcgga
gactcgtggacaaagactgatgcaagcggacaattcctgcagtgtctgtgcttaggaaac
ggccgtggagagtggaaatgtgaaagacacaacacaggccgaaccacaggtgcagtcgcg
gtgaatcccgcccacaccgcgacccagaagcagattgatgtccccgttgaaggaacctgc
cgcacggactctggagccagctactttgacgagcagcgctggatcaggacgcagggcaac
aagcagatgctctgtacctgcctgggaaacggcatcagctgtcaggaatgggaagccaga
agccaggtttacggtggtaactctgatggacggccgtgtgttttccccttcgtcttcatg
ggaaagacctactactcctgcacctcagacggacgcacagatggacagctctggtgctct
acaacctcagactatgagacggacaagcagtactctctctgtactgagaagaatgccatc
gtggcaacacgcggcggaaactccaacggcgccctgtgccacttcccatacctctacagc
ggccgcaactacaccgactgcaccgccgacggccgccgcgacaacatgaggtggtgcggc
accacccacaactacgacggagagcagcggttcggattctgccccatggctgcccacgag
gaggtgtgcaccaccaacgacggcgtgatgcaccgcgtgaacgacaagtgggacaagcgc
cacgactccaacggtcacatgatggagtgcacgtgtctggggaacggccgcggcgagtgg
agctgcattgcgcactcacagctgcgagaccagtgcattgtggacagcttgacctatgaa
gtaaaccaggagttctccaagcgccacgacgagggctacatgatgaactgcacctgcttg
gggcagggacgcggacgctggaagtgtgacgctctcgatcagtgtcaggagccgcaaacc
agagccttctatcagatcggagactcgtgggacaaagccatccacggcatccgctaccgc
tgctcctgctacggccacggcatcggggagctgcggtgtgagccccagcagacctaccaa
gacggccacagaccagtccaggtgatcatcacggaggcgggaaaacagccagactcacac
cccatccagtggaatgcgccttcatctgttcacatcacccagtacatcctcaagtggaga
attaaaaatgcaggagcagcctggcgtgagaccgccatccctggccacctcaactcctac
accatcggcgggctgcgtccaggcgtcacgtacgaaggtcagctgatcagcctccttcgc
tatggacgccgcgaggtcacacgcttcgagttcaccaccacccacggttctttggagaca
tcggagggagagacggaccagccggctccagtcgtggacacatctgagtccgtgactgag
atcacctcaaacagcttcgtggtgtcctggacatcggcctcttctaccatctctggcttc
agggtggagtatgagctcagcgagcagggggcaaagcccaaagtcctggatcttccccgc
acagtcagctccgtcaccatcgctgatctcctgccaggacgcagatacaacgtcaacgtc
tacgagcttccggatcagggacaaccaaaccttatcctgaccacgtcacagaccacggcc
cctgacacgcctgctcagcatgtcatcgacgacgtgggcgagacctccattcgaatcagt
tggaccagacctcaggctccaatcactggttaccgcgtggtgtacacgccgtcggtggaa
ggcagcagcactgagctgaacctgcaagacacagagacctcggtgaacctggtggacctt
cgccccggtctgctctacaacatcagcatctacgctgtggaggggaaccgggagagcgag
cctgtctttgtgcaggtcaacacggctggaactcctcctcctgaggaagtcccggcaccc
accgacctgcagttctatgaggtgacagacgtgaagatcaccatcacgtgggccggtcca
cccagcgaggtgaccggttacagggtgatcttctcccccgtcggcactgacggcactgac
accaggcctcttcagctgcccatctcgcccaacgcgtacgctgatatcacccacctgcag
ccgggcaaactctaccgcttctacatctacgccatcagtggcggagtggagagtgagcct
cttgtggggcagatgtccacaaaaccggattcaccctccgacgtgcgtttctccgacatc
ggccccgacagtgcgctggtcacctgggagggtcctcgtgccgttgtcactggataccgt
ctcttactgagcatcgagggctccaaccccgtggagaagaggattccaggcagggtcacc
cagtatcctctgaggaatctgcggccagacacgcagtacactgccatcctgcactctgag
ctgaacaatgacctcagtgagggtgtcaccaagtatttcacgaccgctcctcagatggga
aatgctcccgtcttcagcaccgaagtcactgactctgccatcaccatctcctggatacct
gtccgcaagttcagctacaggctgtccgtgctccccagtcagcagggcgagtcacccagg
gaagaaacctccgactccgggcgcatccatattcccgatctgatttctggaaaccagtac
tcctacaccgttcagcccatcttcaatggccgcaaccgtggaaaccccatcacccgcacc
gtcgtcacatctgtgtcccctccgactgacctcagagtggagtccagcccgaacacagga
gatctcactgtccactgggacgcctccaaaacaccaggcgtcacaggctacagggtgacg
agcacgcccaccaacggacagctcggaaactctttggaggagttcacccgcgcagatcag
acctccatcatcttagagaacttgaacttggggatggagtacaacatcagtgtcttcgcc
acaaagggtcatttggaaagtgtgcccatgtccagtattatcacaacagacattcccaga
ccaagtcacattgactttgtcgacataactgacaccaccattggcctacgctggacgccc
ctgaactataccgccatcactggttaccggataatggtagtcacgtcaggccagaacatg
cccatttttcaagatatggtggacgcgtctgctggttattacaccgttcacggtttggag
ccgggcgtggactatgacatcagtttggccactgttaccgaggaaggggaaagcgagccg
accacatacacaaagcaaacgcaagctgccattccagctcccaccaacttgcagtttgga
ggtgtgggtcctgaccacatcagggtgacctggacagtcccgcacgttaccgcgccgagc
gacatcgcccgcttcgtcatccgctaccaccccgtggccacggatgacgacatcaaggag
gttaatgtcggtggcgccaccaacaccttcctgctccagaacctgctgcccaacaccgac
tacaggatcagtgttgtgtgtgtgtacgctgaacgagaaagtgaaccagcctcaggaact
cagaggacgactctggactctcccactggtttggacttttctgacatccgcaccaactcc
ttcactgtccactggctcgctccgaccgctgtcatcaccggctaccgcatccgctatcag
aagaccagcggcgggcgagccaaggacgagcggctgccgccaaccaggaactacttcacc
ctgactggactgacgccggagaccgagtaccgcatcgatgtgtatgccgtcaacaacaat
caggagagtcagcctctcactggcacacaggccaccatctctgatgcgcccactgatctt
gaggtggtatcatccacccccaccaccatcaccatacgctgggacgccccctctgtcaca
gtcaacaactacaagatcacctatgcatcgacaagcggcgagactcctcaagaattcaat
atcccgggcactcagaccacggccaccattaccggcctcaatcctggcaccgactacacc
atcactgtctacgctgttacggcacgaggagacagtcctgcctccaacacaccggtctac
atcacacacaagaccgatattgagccgcccaacaacatgaaactgactgacgtgagtgac
aacgccctcacggtgcgctggtctcccgctcagggaccaatcagaggctacagagtcacc
agtgtgccaaagaacggccgcgggccctcctactctgagatggtggcacctgataagaca
cagatgacattcactggtctgatgcccactgtggaatatgttgtgagtgtctacgcgctg
ggtaacgacggacacccctcttcccccgcggtggaaaacgcagtcacggctatggatcgc
cccaaagacctggcgttctctgacattgactccacctccatgcgcatcacttgggaaagc
ccagagggcaccgtgacatcataccgcgtgctgtactccagcccagaggagggcgagcgg
gacttgcgtccagcgcccagaagagaccaggacagcgtcgtgctgagaggccttcgcccc
gggacagagtacaccgtgaaagtcatcgctctgcacggccacacaaccagcacaccttta
gtgggaacccaggctacagtgatccctgctccgaccaacctgctgatctcagaggtcggc
ccgacgacgttcaccgtgtcgtggcgggcgcccactgcgcgcctcaccggctaccgcgtg
gtggtcatccccaagaacatcaacagccccaccaaagagatgaacgtcgccccagacacc
acgcgagtcgtcgtaccaggcctcatggtggcaaccaactaccagatcaaggtgttcgct
ctgaagaactcagtttccagccgaccactagagggagaggtgaccacactggaagacgtg
agtcctcctcgtcgcgtgcgcatctctgacgtgaaggacacgtctttcacgctgagctgg
cgcaacaagatagagaccatcactggtttcctcattgaggccacgccctttggcagctcg
cagcccaccgtcagcaggaccatcgttggagaaacgaccacttacactctcgcaggtctg
cagccgggcacctcatactccataaacatgtacactctgaatggcaacaccagaagcgct
ccattcaccctcacgattcaaacaggtcaaccagtggtccaggctcccagcagccttcgc
ttcacatctctgacccccacctccatctccttcacctggcagcctcctcccacacagatc
acaggatactacgtcacctatgaggagtctggtggagcgccgcgggagctcctcccacga
ccacatgctggtcaaaactacgccaccgtatctggtctgagaccagccaccgagtacatc
atcaagatcattgccgtccagaacacacagaggagcacacctctagtgggccgcatcagg
acccaaccagactccctgcttcccctgccgctgccccaccttcccggaggggctgatgac
aagctggatgtccccgaaactgacttggacaacagtgtccaggtcgtgggcaccagtggc
caggatgcgcttggcggtcaaggccagaatgtggaatacactgagtttaacaacaatgga
gataacaggttgaatgggaacagtggtaacccactgtctccctatgggcaagtgcgtgag
ccgctggtgtttgtgcccctccccgacgcagagggacgcaggctgcccatactgaagctg
aacgtgcccgtcggcaccacctttggtaacgagacgggagtgccacaggaggcccaaacc
cgcaccagcatctcctgggagcctttaaggcagagcagcgcctacctggtgtcctgtcat
cctatcacacacttaaatgagaagatgttccaggtccgtctgccaggcacagccaccact
gccaccctgataggactcacacccggagccaactataaggtgctggtggaggctctgaag
ggggcgctcaaacagaagattctggagcagatcgtcactgctggaaacaccattccagac
ggagtgccctctactggggacacatgttacgacgcctttactgcaacccaccacgatgtc
ggtgctgagtgggagcgaatgtccgagacaggcttcaagctgtggtgcaggtgcctgggg
ctggggagtggacacttcagatgtgattcatcaaagtggtgccatgacaacggcatcaac
tatcgcatcggagagaagtgggagcgccacgcagacaacggtcacctaatgagctgcact
tgtttgggaaatggcaaaggagagttcaagtgtgagccacattcatctgtctgctatgac
gatggaaaaacctaccaagtgggcaaccagtggcagaaggagtatctgggcgccatctgc
acctgcacgtgttacggaggacaacagggctggagatgtgagaactgccgcagacccggt
gctgatgtggacgtcagtctgctgcagccggtcagatatggagacaactcaccgcataga
ctgaatatccactgccccatcgagtgcctccgacccgagctgctggcagacgcacacgtt
ccccagaacgcccgggaataa
DBGET
integrated database retrieval system
