Solea solea (common sole): 131459577
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Entry
131459577 CDS
T10853
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131459577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131459577
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131459577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
131459577
NCBI-ProteinID:
XP_058485541
LinkDB
All DBs
Position
1:2150145..2170945
Genome browser
AA seq
2522 aa
AA seq
DB search
MAAVLLQALERTELNKLPKGVQNKLEKFVTELQNANEALRTQHERFKADSEQQYFDIEKR
LLESQEQILSATKDLQTVKEENKKLNDELNTLKGIEGETPQDKTPQQQTKTKHEIEAERR
ELARLLEKRTQEVENLTEDVNRLSEKLTETNKLKVELQLKLDDVQSSEASVQHREKRMEQ
EKELLEKKIEWLTSELKTKTDELLSTNRDKGKEILELQGNLKNSKEQVTVLESQLTSLKE
TCESHSKRAQDLNNKLKQAKDEQSAMEEKYRNELNAHIKLSSLYKGSATDMEKKNQELSR
AVEELGKVVKEAGEANKALEKKVLEGNGIKIRLEAELKEKIKKMEKELENATMKAAGKRC
CAPSVTEEQLDKMCPSAASIAAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSRVLDE
IVQEVESKAPVLKRQREEYESIQRSMASLCTKLEQARGEIHSLLKEKEEAKQLCDAMERE
KLKTEQQLDDTSAQLCTLLVELEEARGNQVSKDNNSSADISSTSEVISPQQLSFRSVEEL
QRQNQSLLGRLRELEQEKATQQKQAISARVSELEASVDKLQKEVEQLREQRNQQKQLADS
SARQRDMFKALLTQSTGFSLPSQDSSPQPAAVRPSAPGTRSTPQRAAATESAQTAQTKAA
LKQLSDAFSLYKKEKAENDRMLTETNDRLQRQITEFSASHAKLTSQLEFSNKRYEILQET
VSAYRREIAALQDRNQKMSAVVQRHEHSIHTMCQDLRQANEKLALEEVRVKNVTKERDIL
RQGESRLNREKEAMLAEQRNQKLLLTNLKTIQLTMERTETDTRQRLENKIERLEAELASM
KIKMDKEVAQRHTLGRTMDAQLLEAKKQLETQNVVLQKTRDVLRSSEQQVAVLKAQLTPG
SSSDVANSSNNSTTPATRATPLRAPLRARPQTPTAPPQQPSQTSTQQQNQSEKELTEVKG
LLRTAEERNDELAEQLKIANTNVEQYKTLVLTLEDSLKEEKEFRASLEIRLKESQEVQQQ
LEKRIVEVEKMGQQEQEERRKAREALEKQVCEVQRQLKASQTEQQEALERAAASLTKEQK
ATQESLLQTKLAGEAQAKYERELMLHAADVEALQELKKKIQRDVAQKAELEEKLNKTSLL
LQEKTAAWNTLEKQLKEDLSNRSRRSEELGKQNALLHQQMDEMATSSRQQQQQQQMDLSF
SEEGKTTEQLLEILRFVRQEKEIALAQCEVSVGEAVRYKQRVQHQDRELKELQEALNAER
EKMQVTAKTMSQQEEQLKKMHSITALQETNKILKLDRDKLQQELLQAEARVKKLQSDINP
LHHSLSALSEKNGGLQADKRLLEDDVKHWKNKAQQMMNQQKDGNVEERQKLNTEREAQQR
RITQLTEEMAKLKTELARSTASTNAAQSQVQGFRDSVAHLMSEKETLKKDLETKTNDILE
KNKTITQVKKIGRRYKTQYEELKAQHDKLVTETATKTGGEAAPNTELQQELSKAQEELNK
SREELKTLREDIQKKQEATQKAQHELEEAQKETQKTKEKLQEVTNQMTQNQSQLTQIQAQ
LSQTQTQLQQNQNQLTQSQKELQQGKIHSQHVQNHLKAGQARQNQMQRELQQAKDALQQN
LTSQKELQQTSQHSHNQEVNNLKTALSQAEGKVTELQGQLDNLQKTLGEREANIQRLQEQ
LTEANKANEASQAVQAKSSQASDADTATDSNQEEVTKLKQELNESKNKEEQLKQQMADKE
EKTKKLFMGAKTKINQLVAAKDQLSKETEELKQSKEELEVRMSALKSQYEGRLLRLDREL
RELKETQTHSESREEPQDQSGPKGVDQPRSSDQRQISLKSPAQGSSLSEPPTANIRPTPS
TPSPSNKPSPSPGSKSTPRASIRPMVTPATVSIPTPTATVMPTTQTDSQEGEMLMSTGAS
VHSTTSSLVSASTSITQPTSTQATAFVQPTQQQAASQDAGSSMEAERPSTSSSLIGIGSK
RGREDEEEDEEESRPESSLSSPSTKKTRLKPSIALQMEGDEEMEGELRDDGEQQDSPDDS
QELPEEGFPVLAEEDEDIEEEGVCQSVPSYQMSSQDSDLIRDVIVITDSESREGEDKQDD
EGEEEEEEEEEEEDEEEEEEEDDDEEEVGEYKEEEEEDDEDEDDAGDSGMMGGDESNEKS
REAEDEGEEDPSEATNTEEDVCGASSDSQHASEPPQSSSSSVPSESDSTREPAHLPPISS
SVPSPSLTPHLPHPRRPTHSLPPRLYIQPPAPELGPPHTQRQSSQLRRPSVGRGLQLTPG
IGSTQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPPTSA
SHSDLGQLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSGDN
MASQSVPMVTASTGIPAAASDDGDEVFVEQEGDGPGIESSLDNQADVESSGQQSDDASLP
STSQDPDTSSVPQRRTVNSQHLLSSLSTRGSRGGREVRMLTSRRGTFSRGGRGGAMGRGG
FA
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaggctctggagcggacagagttgaacaaactccccaaagga
gtccagaacaagctggagaagtttgtgacggagctgcagaatgctaacgaggcgctgagg
acgcagcacgagcggttcaaagcagacagtgagcagcagtactttgacatcgagaagagg
ctgctggagagccaggaacagatcctgtctgccaccaaagacctgcagacagtaaaggag
gaaaataagaaactcaatgacgaactgaacactctgaaaggaatagagggcgagacacct
caagataaaacaccacaacagcaaacaaagaccaagcatgagattgaggcagagaggaga
gagctggcaaggttgctggaaaagagaacgcaggaggtggaaaacctaaccgaggatgtg
aaccgtctaagtgagaagctgacggagactaacaagttaaaggtggagctgcagttgaaa
ctggatgacgtacaatcatcagaggcctctgtgcagcaccgggagaagcgcatggagcag
gagaaagagttactcgagaagaaaattgagtggctcacctctgaactgaagaccaaaaca
gatgagttgctgagcaccaacagggacaaaggcaaagagattctagagctgcaggggaac
ctgaagaacagcaaggagcaggtgacggtgctagaaagtcagctcacgtctctgaaggaa
acctgtgaaagccacagtaaaagagctcaagacctcaacaacaaactcaaacaggctaaa
gatgagcagagtgcgatggaggagaaataccgcaatgagctcaacgctcatatcaagttg
tcttcactctataagggctcagcaacagatatggagaaaaagaaccaagaactgagcaga
gcagtggaagagctcggcaaagtggttaaggaagctggggaagcaaataaagctctggag
aagaaggtgttggagggcaacggaattaagattcggctcgaggctgagctcaaagagaaa
atcaagaaaatggagaaagagctggaaaacgccacaatgaaggctgctggcaaacgatgc
tgtgcaccttctgtgaccgaggagcagttggacaaaatgtgtccatcagcagcctccatt
gctgcgatagtgaagcctggcatgaagttctttgatctgtataatgcctatgcagagtgt
cagacacagcttcagctggagaaacaggagaccaggagagtgagcagagtgttggatgag
atcgtgcaggaggtcgagtccaaagcgcccgtcctgaagcgtcagcgggaggagtacgag
agcatccagagatccatggcctccctgtgcaccaaactggaacaggctcgaggggagatc
cacagtttgctgaaagagaaagaagaggccaagcagctctgtgatgcaatggagagagag
aaactgaagacagagcaacagcttgatgacacgtctgcacagctgtgtacacttctggtg
gagctggaggaagccagaggtaaccaggtgtccaaggacaacaacagctctgcggacatt
tccagcacctctgaggtcatcagcccacagcagttgtctttccgcagtgtggaggagcta
cagaggcagaaccaaagccttctggggagactgagggagctggagcaggagaaggccact
cagcagaaacaggcaatatcagcacgtgtgtctgagttggaggccagtgtggacaaactt
cagaaggaggtggagcagctgagagaacagaggaaccagcagaaacagctggctgactcg
agtgccaggcagagagacatgttcaaggctctgttgacacagagcactggcttcagcctt
ccttctcaagattcttcacctcaacctgcagctgttcgtccgtccgccccaggtactcgc
tctacgccacaaagagctgctgccactgagtcagcacagactgctcagactaaagcggcg
ttaaagcagctcagtgatgccttcagtctgtataaaaaggagaaggcagagaacgacagg
atgttgactgaaacaaacgacaggctgcagagacagataacagaattcagtgccagccac
gccaagctgacctctcagctggagttcagcaacaagaggtatgaaatactccaggagact
gtgtcggcctaccgcagagagatcgccgctcttcaggacaggaaccaaaaaatgtctgct
gtcgtccaacgacacgagcactcgattcacacaatgtgtcaggatctgcgacaggcgaat
gaaaaactggcactggaagaggtgcgtgtaaaaaatgtgacaaaagagagagacatttta
aggcaaggggagagtagactgaaccgagaaaaggaagccatgctggctgagcaacgtaac
cagaaactactgctcaccaacctcaagactatacagttgacgatggagcgcacggagacg
gatacacgccaacggcttgagaacaaaatagagcgtctggaggcagagctggcttccatg
aagattaagatggacaaggaagtagctcagagacataccctcggacgtactatggatgct
cagttgttggaagccaagaagcagctggagactcagaacgtcgtgctacagaagaccagg
gatgtgttacgtagttctgaacagcaggtggcagtgttgaaagcccagctgacccccggt
tcatcatctgatgttgccaacagctccaacaactccaccaccccagctacccgagctaca
ccactcagagctccactgagagcgcgccctcaaacaccaacagctccaccccagcagcca
agccaaacgtccacccagcagcagaaccagtcagagaaggaactaacggaggtgaaaggt
cttctgcgaactgctgaggaacggaacgatgaactagcagagcagctgaagattgccaat
accaatgttgagcagtataaaactttggtactgaccctggaagatagtctgaaggaagaa
aaggagttccgtgcctccctggagatcagactgaaggagtcacaggaggtgcagcaacag
ctggagaagaggattgtagaggtggagaaaatggggcagcaggagcaggaggagaggagg
aaggcgagggaggccctggagaaacaagtgtgtgaggtgcagcgtcagctgaaggccagt
cagactgaacagcaggaggcgctggagagagcggctgcttctctcacaaaggagcagaag
gccactcaggagagtctgctgcagaccaagctggctggagaggcgcaggccaagtatgag
cgggagctaatgcttcatgctgctgatgtggaggctctgcaggagctgaagaaaaaaatc
caacgagatgtagctcagaaggctgagttagaggagaagctaaacaagacgtccctactc
ctgcaggagaaaaccgcagcatggaacacattagagaaacagctaaaggaggacctgtcc
aatcggagtcgtcgctctgaggagctgggcaagcagaacgctctcttgcaccagcagatg
gatgaaatggccaccagtagtcgtcagcagcagcagcaacagcagatggacctgtcgttc
agtgaggaaggaaagaccactgagcaattattagaaatactcaggtttgtgcggcaggag
aaagagatcgctctggctcaatgtgaggtgtcggtgggagaagctgttcgctacaaacag
cgagtgcaacaccaggacagagaactgaaggagctgcaggaagctctgaatgctgagagg
gagaaaatgcaggttacagctaagactatgtcgcagcaggaggaacagctgaagaagatg
cacagtatcactgctctacaggaaaccaacaagatactgaaactggacagagacaagttg
cagcaggagctgcttcaagcggaggctagagtgaaaaagctgcagtcagacatcaaccca
ctgcatcactcgctgtctgcgctgtcagagaaaaatggcggccttcaggctgacaagagg
cttctggaggatgacgtcaaacactggaagaacaaagcacagcaaatgatgaaccaacag
aaagatggaaacgtggaggagaggcagaaactgaacacagagcgagaagctcagcagaga
cgcatcacacagctcactgaagagatggccaaactcaagactgaactggccagatccact
gccagcacaaatgcagcacagtctcaagtgcaaggcttcagagactctgtggcacatctg
atgtcggagaaagagactctgaaaaaagacctggaaacgaagaccaatgacattttggag
aagaacaagaccatcacacaggtcaagaagatcggacgacgctacaagacccagtatgag
gagctgaaagcccagcatgacaagttggtcacagaaacggcaactaaaacaggaggtgag
gcagctccaaacacagagttgcagcaggagctgagtaaagcccaggaggagcttaacaag
tccagagaggagctgaaaaccctgagagaagacattcagaaaaaacaggaagctactcag
aaagcccagcatgagttggaggaggcccagaaggagacgcagaagaccaaggagaaattg
caagaggtcactaaccagatgacacagaaccagagccaactgacacagatccaggcccag
ttgtctcagactcagactcagctacagcagaatcagaaccagctgacccagagtcagaaa
gagcttcagcaaggcaagatccacagccagcatgtacaaaaccatctgaaagcaggtcag
gcccgtcagaaccagatgcagagagagctccagcaggcaaaagacgcgctccaacagaac
ctcaccagtcagaaagagctgcagcaaacgagtcaacacagccacaaccaggaagtaaat
aatcttaaaactgctctgagccaagcggaggggaaggtgactgaactccagggacagctg
gacaacctgcagaagacgcttggtgagcgggaagcaaacatccagcgtctgcaggagcag
ctaactgaagccaacaaggctaatgaagcgagtcaagctgtgcaggccaagagttcccag
gctagtgatgccgacactgctactgactctaaccaagaggaggtgactaaactcaaacaa
gagctcaacgagagcaagaacaaagaagagcagctgaaacaacagatggctgacaaagag
gaaaagaccaaaaagctcttcatgggagccaagaccaaaatcaaccaactcgtggctgcc
aaagatcagctttctaaagagacagaggagctgaaacagagtaaagaggaactggaggtg
agaatgagcgcccttaagtctcagtacgaaggtcgacttcttcgtctggacagagaactg
agggagctgaaagagacgcaaacacactccgagtccagagaggaaccacaggaccagagt
ggacctaagggggttgatcagcccagatcttcggaccagcgacagatatcactgaagagt
ccagctcaaggctccagtctgtctgagccacctactgcaaacatccgcccaactccaagt
acgccatctcctagcaacaagcccagcccctcccctggaagcaagtccacgccccgtgcc
agcatccggcctatggttaccccagcaactgtctccatcccaacacctactgccactgtg
atgccaaccacacagactgacagccaagagggtgagatgctaatgagtacaggagcgtcg
gtgcactccaccacctccagtctggtgagtgcatccacctccataactcagccaaccagc
actcaagccacagcgtttgtccagcccacccagcagcaggcggccagtcaggacgcagga
tccagcatggaggcagagcgaccctccacgtcctcctctctgattggaataggttcaaag
cgaggcagagaggacgaggaggaagacgaagaggagagcaggccagagagttccctctca
tcgccgtctacgaagaaaacgcggcttaaaccatcaatagcactgcagatggaaggtgat
gaggagatggaaggtgagctgagggatgacggggaacaacaggactcgccagatgacagt
caggagctcccagaggaaggtttccccgttttggctgaagaagacgaggacattgaggaa
gaaggcgtgtgccagtctgtcccctcttaccagatgtcctctcaggactcggatttgatc
cgagacgtcattgtgatcacggacagcgagagcagagagggagaggacaagcaggacgat
gaaggcgaagaagaagaagaagaagaagaggaggaggaagacgaggaggaggaggaggag
gaggacgacgatgaggaggaagtgggggagtataaggaggaagaggaggaggacgacgaa
gacgaggacgatgctggtgacagtgggatgatgggaggagacgagagtaatgagaagagc
agggaggctgaagatgaaggagaggaggacccatcagaggccacaaacactgaggaggac
gtgtgcggagcatcttcggactcccagcatgcatctgagccgccacagagcagcagcagc
agtgtcccgtcagagtccgactccaccagagaacccgcacacctcccccctatctcctcc
tctgtcccctccccctccctcactccccacctgccccatccccgcagacccacacactcc
ctccctccaaggctctacatccaaccaccagctccagaactgggacctccacacacacag
agacagtcctctcagctgcgcaggccgtcggtcggacgtggacttcaactcactcctgga
atcggcagcacgcaacatttctttgatgatgatgacaggatggttcccagtactcccact
ctggtggttccacatcgcactgatggctttgctgaggctatacattcccctcaggtggca
ggtctgtccaccaggtttaggtttggacctccagaggacctgctgcctccgacttcagcg
tctcactctgacctaggacagctggcctctcaaggaggtttggggatgtacgagtctcct
ctgttcctggctgcacatgatgaagacggaggagggcgaagtgtccccaccacaccttta
caagtggctgcaccagtgaccgtcttcaccgagtcgctgccctcagacagtggcgacaac
atggcctcccagtctgttcccatggtaacggcctccacagggatccctgctgctgcctca
gacgacggagacgaagtctttgtggagcaggaaggagacgggcctggtatcgagtcgtct
ttggacaaccaggcagacgttgagtcgtcagggcagcagagtgacgatgcatcactgcct
tctacaagccaagaccctgacaccagcagtgttcctcaacgacgcacggtgaacagccag
catctgctcagcagcctgtcgaccagaggaagcagaggagggcgggaggtcaggatgttg
accagtcgcagaggaactttctctcggggaggaagaggaggggccatgggcagagggggc
tttgcctaa
DBGET
integrated database retrieval system
