Solea solea (common sole): 131459596
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Entry
131459596 CDS
T10853
Symbol
ercc3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03022
Basal transcription factors
ssoe03420
Nucleotide excision repair
Brite
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131459596 (ercc3)
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131459596 (ercc3)
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131459596 (ercc3)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131459596
NCBI-ProteinID:
XP_058485572
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Position
5:5498562..5511708
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AA seq
783 aa
AA seq
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MGKRDKGDRDKKSKKRFHEDDDDDEEAAGSESQEAIPAAAGKQVEESGIKLDEYGGKDYR
SQMLLKDDHSSRPIWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPNHVHEYKLTAYS
LYAAVSVGLQTSDIVEYLQKLSKTSLPEGIIQFIKLCTVSYGKVKLVLKRNRYFAESAFP
DVIQRLLQDSVIRKCRLRTVDGDETELITEIIHSKSAISKSVEEKEGMSNSQQSSEGQSS
TQQVPEDIFSYYEQMDKEEEEEEETQTVSFEIQQEMIEELQKRCIQLEYPLLAEYDFRND
TVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKSQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS
WEAERVMEWMRSQEWGLIILDEVHTIPARMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIRFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANCLIQISSHGGSRRQEAQRLGRVLRAKKGMAAEEYNAYFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLMFSNRDDQQLLLQKVLAAS
ELDAEEEVVSGELGARPQFSRRTGTMSSMSGADDTVYMEYQSRGGKSSANAKGIHPLFKR
FRK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagggataaaggagaccgggacaagaagtccaaaaagcgtttccatgaggac
gatgatgacgatgaagaggcggcgggcagcgagtctcaggaggccatacctgctgctgca
gggaaacaagtggaggagtctggtatcaaactggatgaatatggaggcaaagactaccgt
tcgcagatgctcctcaaggatgatcactcttcacgtccaatctgggtggctccagatgga
cacatctttctggaagccttctccccagtatacaagtatgcacaggatttcttggtggcc
attgcagagccagtgtgtaggcctaaccacgtccatgagtacaagctgacagcctactcc
ctgtatgcagctgtcagtgtggggctgcagacctctgatattgtggagtacctgcagaaa
ctcagcaaaacctctttacctgagggaatcattcagttcattaagctctgcacagtgagc
tacggcaaagttaagctggtgctcaagcgcaacaggtattttgctgagagtgccttcccc
gacgtgatccagcgcctcttgcaggacagtgttattcgtaaatgtcgcctgcgtactgtg
gatggagacgagactgaactcatcactgaaatcatccacagcaagtcagcgatctccaag
tcagtcgaggaaaaggaaggcatgtcgaactcacagcagtccagtgagggtcaaagctcc
acccagcaagtcccggaggacatcttcagctactatgagcagatggataaagaagaggag
gaggaagaggagacgcagacggtttccttcgagattcaacaggagatgattgaggagctg
cagaagcgctgcattcagctggagtatcccctcctagcagagtacgactttcgcaacgat
accgtcaacccagacatcaacatagacctgaaacccaccgctgtgctgcggccgtatcag
gaaaagagtctgcgcaagatgtttggcaatggacgtgctcgctctggagtcatcgtgctg
ccctgtggagctgggaaatctcttgtgggcgtgacagcagcgtgcacagtgcgcaaacgc
tgtctggttttgggtaactccgctgtgtctgtggagcagtggaagtcccagttcaagatg
tggtccacaatcgacgattctcagatctgccgcttcacctcagacgccaaggacaaaccc
atcggctgctcggtggccattagcacctattccatgttgggtcacaccaccaaacgctcc
tgggaggctgagagggtcatggagtggatgcggagtcaggagtggggactcatcatcctg
gatgaggtgcacacgatccctgccaggatgtttcgtcgcgttcttaccatcgtccaggct
cactgcaaactggggctcactgccactctggtcagggaagatgacaagatcgtggacctc
aacttcctcattgggcctaagctgtatgaggctaactggatggaactgcagaacaacggt
tacattgccaaagtccagtgtgcagaggtatggtgcccgatgtctccagagttttacaga
gagtatgtggcgataaagacaaagaagcgcatcctgctttacaccatgaaccctaacaag
ttccgtgcctgccagttcctcatccgctttcacgagcgccgcaacgacaagatcatcgtc
tttgccgacaacgtgtttgctttaaaggagtacgccattcgcctcaataagccatacatc
tatggtccaacctctcagggggagcgcatgcagattttgcagaacttcaaacacaaccca
aagatcaacacgatttttatttccaaggttggagacacttcctttgacttgccagaggcc
aattgtctgatccagatctcctcccatggtggatcacgtaggcaggaggcccagaggctc
ggaagagtcttacgagccaaaaaaggaatggcagcagaggagtataatgcctacttctac
tcactggtgtcccaggacacacaggagatggcttattcgaccaagaggcagaggttcctg
gtggaccaaggttacagctttaaggtcatcactaaattggcagggatggaggaagaggac
ttgatgttctccaacagagacgatcaacagctgctgctgcagaaggtgctggctgcttca
gaactggacgctgaggaggaggtggtatcaggggagctgggcgcacggccgcagttctcg
aggcgaacaggcaccatgagctccatgtcgggcgcagacgacaccgtctacatggaatat
caaagccgcggcggcaagtcctctgcaaacgccaagggtattcatccgctgttcaagcgc
ttcaggaagtag
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