Solea solea (common sole): 131459616
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Entry
131459616 CDS
T10853
Symbol
dhx38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131459616 (dhx38)
Spliceosome [BR:
ssoe03041
]
Complex C
Other components
Step II factors
131459616 (dhx38)
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GFIT
Other DBs
NCBI-GeneID:
131459616
NCBI-ProteinID:
XP_058485601
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Position
5:complement(1340036..1356824)
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AA seq
1256 aa
AA seq
DB search
MMDDDVSMHRLEGSDPAAQVGGLVVKKKSTPLEAHVFRAPTPRTSLLGLDLLAAQKRKER
ESNAQADATEDINRKKSKVSSFKDWEESKSDSGSDEEDDDKDKGAKKERKYRVTGSETPS
NPGGVSEEFRRRHQQREKDRREHGVYASSKEDRNKDRDRERRRDKGRDRRNEKDERDSGH
GRESSGNRSERSERGERSERSQRDGSSERLSRGSKRDEPLSPQQRPRDGFTPSRSNWDED
DSGYGSTRNSQWESPSPAPSNRETDRSERSHRSGRDSERKDRSVRGRYSDDTPLPTPSYK
YNEWANDRKHLGSTPRLSQGKGRKDGEGGIMFDNEDAKEEWEEDQKQADRDWYMMDEGFD
EFNNPFTSTSEDYVKKREQILQKQTQKRISAQKRQINEDNERWETNRMLTSGVVQRLEVD
EDFEEDNAAKVHLQVHNLVPPFLDGRIVFTKQPEPVIPVKDPTSDMAIISRKGSQLVRKH
REQKERKKAQHKHWELAGTKLGDIMGIKKTEEEDVSGGKPVGEDGKVDYRAEQKFADHMR
EKSEASSEFAKKKTLLEQRQYLPIFAVRQQLLNIIRDNSIVIVVGETGSGKTTQLTQYLH
EDGYTRYGLVGCTQPRRVAAMSVAKRVSEEIGTNLGEEVGYAIRFEDCTSEKTLIKYMTD
GILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRTDLKLIVTSATMDSD
KFAAFFGNVPIFHIPGRTFPVDIMFSKTPQEDYVEAAVKQSLQIHLSGLMGDILIFMPGQ
EDIEVTSDQIVERLGDLENSPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAET
SLTVDGIMFVVDAGYCKLKVFNPRIGMDALQVYPISQANANQRSGRAGRTGPGQCYRLYT
QSAYKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWIL
GALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMGCSADILIIVSMLSVPAIFYRPKGR
EEESDQVREKFAVPESDHLTYLNVYMQWKNNNYSSVWCNDHFIHTKAMRKVREVRSQLKD
IMVQQRMNMVSCGSDWDIIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSSLFGM
GYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEELT
NMDNEMAMAQEQLKSRREEQEKKSNVGSVRAVKICTPGRKEQTPMTPRRTPARFGL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgacgatgtgtccatgcataggcttgaagggagtgatccagctgctcaggtc
ggtggacttgttgtgaaaaaaaagagtactcctttagaggcccatgtatttcgagcaccc
actcctcggacgtctttgctgggcttggatcttctggcagcacagaaaaggaaggagcgt
gagagtaatgcacaagcagatgccactgaagacatcaatagaaagaaatcgaaggtttcc
tccttcaaggattgggaggaaagtaaaagtgactcaggctctgatgaagaggacgatgat
aaggacaaaggtgctaagaaggagaggaaatatcgagtgactggttctgagacgccctca
aaccctggaggggtcagtgaagagttcagacgcagacaccagcagagagagaaagacaga
cgtgaacatggagtctatgcttcctccaaagaagacagaaacaaagacagagacagagaa
aggaggcgagataaaggcagagacagacggaatgaaaaggacgagcgagatagtggccac
ggccgtgaaagcagcggcaaccggtcagagcgctcggagcgaggtgagaggagtgagcgt
tcacagagagatggatcgtcagagagactcagccgagggagtaagagagatgaacctctt
tcaccacagcaacgcccaagagatggttttacaccttcacgctcaaactgggatgaggac
gacagtggttatggtagcacaaggaattcccagtgggaatctccatctcctgccccatcc
aacagagagacagaccgctcagagcgaagccatcgctccggccgagacagtgagagaaag
gacaggtcagtcagaggacgctactctgacgatacacccctgcctaccccgtcatataag
tacaatgagtgggccaatgacagaaaacatctggggtctacacctcgtttatcacaagga
aaaggaagaaaagatggtgaggggggaataatgtttgataatgaggatgcgaaagaagag
tgggaagaggaccagaagcaagctgacagagattggtacatgatggatgaaggctttgat
gagttcaacaatcctttcacttccacatcggaagactatgtaaagaaaagagaacagatc
cttcagaagcagactcagaaaagaatatcagctcagaagcgacagatcaacgaagataat
gagcggtgggagaccaaccgtatgctgaccagtggtgtggtgcagaggttagaagtggat
gaagactttgaagaggacaatgctgctaaggttcatctgcaggttcacaacctggtccct
cctttcctggatggaagaatagtctttactaaacagccagagcctgtcattcctgtgaaa
gatccgacttctgacatggccatcatctctcggaagggcagccagcttgtccgcaaacat
cgcgaacagaaagaacgaaagaaggctcaacacaaacattgggagttagcaggcaccaag
ttgggagacatcatgggaatcaagaagacagaggaagaagatgtctctggaggcaaacca
gtaggtgaagatggcaaagtagactacagagctgagcagaaatttgcagaccacatgaga
gagaagtcagaggccagcagtgagtttgctaagaagaagactctcctggagcagagacag
tacctgcctatctttgcagtcaggcagcaacttctcaacatcataagagacaacagcata
gtgattgttgttggggagactggtagtgggaagaccacgcagctgacccagtacctgcat
gaggatggctacaccaggtacggcttagtgggttgtactcagccccgaagagtggcagcc
atgagtgtggccaagagagtcagcgaggagataggcaccaaccttggagaggaggtgggt
tatgcaatccgtttcgaggactgtacgtcagagaaaactctgataaagtacatgacagac
ggtatcctgctcagggagtcgctgagggagtcggacctggaccactatagtgcggtcata
atggacgaagctcacgaacgctccctgaacaccgatgtactgtttggcctgttacgcgag
gttgtttctcgtcggactgatttgaaactcatcgttacctctgcaacaatggactcggat
aagtttgcagcattttttggcaatgtacccatatttcacattccaggaagaacatttcca
gtagacatcatgtttagcaagacacctcaggaagactatgtggaggcagcagtgaagcag
tccctgcagatccacctcagtgggttgatgggtgacatcctcatctttatgcctggacag
gaggacattgaggtgacgtcagatcagatagtggagcgtttaggagacttggagaactct
ccacctcttgctgtgcttcccatttactctcagctgccatctgacctccaggccaagatc
ttccagaaggcaccagatggtgtgaggaagtgcattgttgctacaaacatcgctgagact
tccctcactgtggatggaatcatgtttgtcgtggatgcagggtactgcaaactcaaggtt
ttcaatcctcgcattggaatggacgcactgcaggtttatcccatcagtcaggctaatgcc
aaccagcgctctggcagagcagggcgtacaggaccaggacagtgttacagactttatact
caaagtgcttacaagaatgagatgctgacgaccaccatacccgagatccagaggacaaac
ctggccaatgttgtcctgctgttgaagtctctgggtgttcaggatttgctcctcttccac
ttcatggatccaccgcctgaggacaacatgctcaactctatgtaccagctctggatcttg
ggagcactggacaacacaggagctttgacgccaacagggcgactgatggtggagtttccc
cttgaccccgccctctccaagatgctgattgtgtcatgtgacatgggctgcagtgctgac
atcctcatcattgtctccatgttgtctgtgccggccatcttctacagacctaaaggtcgt
gaggaggagagtgaccaggtgagggagaagtttgccgtcccagagagtgaccatctcacc
taccttaatgtgtacatgcagtggaagaacaacaattactccagcgtctggtgcaatgac
cacttcatccacaccaaggccatgcgcaaggtgcgtgaggtgcgctcccagttaaaagac
atcatggtgcagcagagaatgaacatggtgtcttgtggctcagactgggacatcatcaga
aagtgcatatgtgccgcctacttccaccaagctgccaagctcaagggcattggagaatat
gtgaacgtgaggacaggcatgccgtgtcacctccatcctaccagctctctgtttggtatg
ggctacactcctgactacatcatctaccacgagctcgtcatgaccaccaaggagtacatg
cagtgtgttactgcagtggatggagagtggctggccgaacttggacccatgttttacagc
atcaaacatgcaggaaagagcagacaggagaaccgtcggcgtgccaaggaggagctcacc
aacatggataatgagatggctatggctcaggagcagctgaaatcacgccgggaggagcag
gagaagaagagcaatgtcggcagcgtcagggcagtgaaaatctgcacaccaggaagaaaa
gaacagacccccatgacacccagacgcacccccgcccgctttggactgtag
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