Solea solea (common sole): 131459919
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Entry
131459919 CDS
T10853
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
131459919 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssoe04515
]
131459919 (lrrc4cb)
Cell adhesion molecules [BR:
ssoe04515
]
Immunoglobulin superfamily
NGL family
131459919 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
131459919
NCBI-ProteinID:
XP_058486060
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Position
5:11122803..11166036
Genome browser
AA seq
631 aa
AA seq
DB search
MLNTMISSLQHQTMKGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVKLEELEMSGNQLAVIKPSSF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDIMWLSWWLKETVPANTSCCARCHSPTVFKGRYIGELDHSYFQCDVPVILEP
PSDLNVTEGMAAELKCRTNSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGDDSQTPLPPFGWVS
SSTTKGTPVSTRTTERTYTIPVVDLDGDGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHH
PPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcaccagacaatgaaaggtcgtaggctgaag
ggggcactgtccaaccccctctttgtgctgcttttggcccttcagatcctggtggtggct
gggctggttcgtgctcagacctgcccttcagtctgctcatgcagtaaccagttcagcaaa
gtcatatgcactcgccgcagtctacgggatgtcccagatggcatttccaccaacactcgc
tacctgaacctccaagacaacctcattcaggtcatcaaggtggacagtttcaaacatctg
cgccacctggaaattctacaactgagcaaaaaccacatccggagcattgaaattggcgcc
ttcaatgggctggccagtcttaacaccttagagctttttgataatcggctcacgacaatc
cccaatggagcctttgagtacttgtccaagctgaaggagttgtggctacggaacaaccca
attgaaagtataccatcatatgccttcaacagggtcccctcacttcgaaggctagattta
ggtgagctcaaacgtctctcttacatttctgatggagcattcaaggacttgagcaacctg
cgttacctgaacctgggaatgtgcaatctcaaggagattcccaacattctacctttggtc
aagcttgaagaactagaaatgtctggaaaccagcttgctgtaatcaaacctagctcattt
acaggattagtgaatctccagaagctgtggatgatgcatgcccagatccaaactattgag
aggaattcctttgatgaccttcagtcactggtggagctcaacctggctcacaacaacctt
acctttctaccacatgacctcttcacaccattgcatcgcctagagcgggtccacctccat
cacaacccctggaactgcaactgtgatataatgtggctcagctggtggctgaaggaaact
gtacctgctaataccagctgctgcgcccgttgccatagtcctacagtttttaaaggtcgc
tacattggggaactggaccacagctacttccagtgtgatgttcctgtcattctagagcca
cccagtgacttaaatgtgacagaaggcatggctgcagagcttaaatgtcgtacaaattca
ctgacatccatcagctggcttacaccaaatggctcattggtgacccatggggcttacaaa
gtgcgtttgtctgtactcaatgacgggacactgaactttactagcgtcacaatgcaggac
actgggacctatacctgcatggttagcaacacagctggcaacatctctgcctctgctgtc
cttaatgtcacctctgtggaaaacagtggggtgacctatttcaccacagtcactgtggag
accattgagacacctggtgatgatagtcaaacaccacttcctccatttggctgggtgtca
tcctcaacaacaaaaggtactcctgtgtcaacgaggaccacagagcggacttacaccatt
ccagttgttgatctggatggagatggagccctcaatggcctggatgaagtgatgaaaacc
acaaagattatcattggctgctttgtggccatcacactcatggctgctgttctgctggtt
attttctacaagatgaggaaacagcataaccagcaggatcctgatggtcctgcctcctct
atggaggtcattactgttgaagaagagcttgcaggtgttgctgccatggagagacaccta
tcgctgccccctctggagcactacaaccactacaacacctacaagagcacttaccaccac
ccgcccatgctgagtaccatacacagctcagccacacaggaacctttactgattcaagct
tgctcaaaagacaatgtacaagagactcaaatctaa
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