Solea solea (common sole): 131460242
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Entry
131460242 CDS
T10853
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04217
Necroptosis
ssoe04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
131460242 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
131460242 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssoe04121
]
131460242 (rbck1)
Enzymes [BR:
ssoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
131460242 (rbck1)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
131460242 (rbck1)
Multi subunit type E3
LUBAC complex
131460242 (rbck1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LTM
Zn_ribbon_RanBP
zf-RING_UBOX
zf-RING_5
ubiquitin
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Ubiquitin_5
zf-RING_11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
131460242
NCBI-ProteinID:
XP_058486533
LinkDB
All DBs
Position
6:complement(8096449..8104346)
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AA seq
517 aa
AA seq
DB search
MASETAPKVNLKEAEELALSLSEALSSGNSEEAVKLCQELSQLSLPVSVNINSQAYPQES
IRLKVGVEDAQSDTCIPMTLEVSLDMTIAQLKEKISHDYGFAPLLQRWVIGKRLARDKET
LYNHGVRHNGDQAFLFIRSAHTVNLTRHQHNIDQEQQRIEGIVESMETMHLFPRGLGGGG
GQKAAPPPLPAKPPTVPKPAVLPKPQLGWACTSCTFMNKPTRPGCEICGGERPENYKVPE
IYQPDQEEILRIQQEKLAMLQYEQAQKDEREMNYMYLLATDEQNLISNATEIDCPICFNT
VGPEEGIVLRECLHTFCRECLHSTIVNSHDAEVSCPDACDSKLLDREIKALLTEEEHQRF
LELRLIIAESRTDHSFHCQTPNCRGWCVYEDEVNEFLCELCQMTNCILCKAIHTGMNCKD
YQDDLRIRAQNDQAAQQTKLMLEALVQNGEAMKCPRCDVIVQKKDGCDWICCLMCKTEIC
WVTKQARWGPNGRGDTSGGCKCRVNNQPCHPNCQNCH
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaaactgcacccaaagtcaatctgaaggaagcggaagaacttgctctctct
ctgagtgaagctctcagcagtgggaacagtgaagaagcagttaaactgtgccaggagctg
tcacaactgtctctaccagtctctgtcaatatcaacagtcaggcttaccctcaggaatcc
ataaggttgaaggttggagtagaggatgctcagtcagatacctgcattccaatgacgctt
gaggtttctcttgatatgacaattgcacagctgaaagaaaagatcagccatgactatggg
ttcgcgcctttgctgcagcgttgggtgatcggcaagaggttggctcgagacaaggagaca
ctgtacaaccacggtgtacgtcacaatggcgaccaggctttcctgttcatccgctctgcc
cacactgttaatctgacccggcatcagcataatatagaccaagagcagcaacgcattgag
ggcattgtggagtcgatggagacaatgcacctttttcccagagggctgggcggaggtggc
ggacagaaggcagctcctcctcctcttcctgctaaacccccaactgttcctaaacctgct
gtgcttcctaaacctcagctgggctgggcctgcactagttgcacttttatgaacaagcca
acgcgtcctggttgtgagatatgcggaggggaacggcctgagaattataaggtgccagag
atctatcagccggaccaggaggaaattctacgaattcagcaggaaaagttggccatgttg
cagtatgaacaggctcagaaagatgaacgagagatgaactacatgtacttgttggcaaca
gatgaacagaatcttatctccaacgccacggaaatagactgtcccatctgcttcaatact
gtggggccagaagaaggcattgtgctcagagagtgtctacacaccttctgcagggagtgt
ttacattcgacaatcgtgaacagtcatgatgctgaggtttcatgccctgatgcatgtgat
agcaagctactagatcgggaaatcaaagcgctgctcacagaggaagagcaccagcggttt
ctggagttgcgcttgataatcgcagagagccgcacggatcacagcttccactgtcagact
cccaattgtcgaggatggtgcgtctacgaggatgaagtcaatgaattcctctgtgaactt
tgccaaatgaccaactgtatcctctgcaaggccatccatacaggcatgaactgcaaggat
taccaggatgacctgcgcatccgagcacaaaacgaccaggcagctcagcaaaccaagctg
atgctagaggctttagtgcagaatggagaggccatgaaatgtccacggtgtgacgtcatc
gtccagaaaaaggacggctgcgactggatctgctgcttgatgtgcaagacggaaatctgc
tgggtcaccaaacaagctcgctggggaccaaatggccgcggtgacacatcaggtggctgc
aaatgtcgagtgaacaatcagccttgccatccaaactgccagaattgccactga
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