Solea solea (common sole): 131460593
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Entry
131460593 CDS
T10853
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03083
Polycomb repressive complex
ssoe04980
Cobalamin transport and metabolism
ssoe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131460593 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
131460593 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
131460593 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssoe01009
]
131460593 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131460593 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
ssoe03029
]
131460593 (hcfc1a)
Protein phosphatases and associated proteins [BR:
ssoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131460593 (hcfc1a)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
131460593 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
131460593 (hcfc1a)
MLL-HCF complex
131460593 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
131460593 (hcfc1a)
Mitochondrial biogenesis [BR:
ssoe03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
131460593 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
131460593
NCBI-ProteinID:
XP_058487184
LinkDB
All DBs
Position
6:24933132..24952114
Genome browser
AA seq
1754 aa
AA seq
DB search
MSAPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKISRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDNMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPAMSTAHSL
PINSPKSPAPAAAAPSAQSFPQTAVLKVAAQQSATGASVVTVRPSQPGKSPVTLTSLPPG
VRMVMPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTMKMASPVMVSNPATRMLKTAAAQVGTAAGSSPNTRPIITVHKSGAVTVAQQAQV
VTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAITGQASTNPLTQL
IQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPSTTKQGTTIIK
TIPMSAIMTQPGATGHTRFTTALSQHNNGVTSSAGMKTPITILTTKVMTTGTPGKIITAV
PKLGTAAGQQGLTQVVLKGAPGQPGTILRTVPMGTMGGVRLVTPVTMSSMKPNVTTLVVK
GTTGVTTLGTVTGTVSSSLAGGAGDNSSASLVTPITTLGTISTLSSQVISPAAITVSAAQ
TSLTSASTLPSSTITVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGE
GSGTVTLVCSNPPCETHETGTTNTATTSSATIGAGRVCSNPPCETHETGTTNTATTASSN
MSALRVCSNPPCETHETGTTNTATTASSNMGGVQQVCSNPPCETHETGTTNTATTASSNM
GGVQQVCSNPPCETHETGTTNTATTASSNMGGVQQVCSNPPCETHVTGTTNTATQASSNM
NAGQTDTTQGGFSNPPCETQGTGTTNTPSTATSSMGGEQTSTTAGLVQRVCSNPPCETHE
TGTTNTATTATCSMETGEGTAAQQSEEGTEGTSSTEAVSTTATTSMVTTTTTTQGRAITT
VTQSTPAPGPSVPSISSITEGVSTVASSTEEPMQTEEAASAEAAPTEASTAMETQAEGEA
ATATDLNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQA
AQQAVMNESESVGDSQQPTTIPIMLTQQELAALVQQQQLQEAQAAAQQAAVDTSLPTEGL
APADSLNDPSVESNGHNEMAAAVTSAVVSLLPRTTAETLAPSSTFAPSVAVASPAKMQAA
AAALAEVANGIEGEKQAPQPTPVKPIVKKENQWFDVGIVKVTNMVVTHFYMPTDESQGDD
DSGTMPDYSQMKKMELQPGTAYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIKIS
KSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLV
QSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAKPAPKRPGTSP
DTKVTGPKKARTDQ
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacggcgtcggttctgcagccgcggtgg
aaacgggtcctcgggtggtccggtcccgttccccggcccagacatggtcatagagccgtg
gctataaaagagctcatggttgtctttggcggtgggaacgaaggcattgtggatgaatta
catgtatacaacaccgcaacaaaccagtggtttatcccagcggtccgtggtgacatcccc
cctggttgtgctgcctatggttttgtctgtgatggcacaagattgctggtgtttggtgga
atggtggagtatggaaagtacagcaacgacctctatgagctacaggctagcaggtgggaa
tggaaaaaattgaaagcaaaaaacccaaagaatgggccccctccttgtcctcgtctcggc
cacagtttttcccttgttggtaacaaatgctacctgtttggtggattggccaatgacagt
gaggacccaaaaaacaacattcccagatacctaaatgatctgtacacacttgagcttcgt
gctggttccagtgtggttggatgggatattccaatcacttatggagttttgcctcctccc
cgtgagagccacactgctgtggtatacacagaaaagataagcaggaaatctcgcctgata
atatatggagggatgagcggctgtcgtcttggagatctgtggacacttgatattgatacc
ctgacatggaacaaaccatcagtaagtggcacagctccacttcctagaagtcttcactct
gccaccaccatcacaaacaagatgtatgtgtttggaggatgggttcctctggtaatggat
gatgtcaaggtggccacacatgagaaggaatggaagtgcactaacactcttgcctgccta
aatctcgataacatgtgttgggagacagtattgatggatacactagaagacaacatcccc
agggcccgtgctggccattgtgctgtggccatcaattccagactttatgtttggagtggc
cgtgatggttaccgcaaagcctggaacaaccaagtctgctgtaaagacctctggtacctg
gaaacagagcgtccacatgcccccgccagggtacagttagtccgtgccaatacaaactct
cttgaggtgagctggggagcagtttccactgctgacacctatttactgcagctacagaag
tatgacattcctgcaactccagctgcagcctcaccagccatgagcaccgcccactccctg
cctataaactctccaaagagccctgcacccgctgcagcagcgccctctgctcagagcttc
ccacagacagctgtcttgaaagtagcagctcagcagtctgcaacaggcgcgtctgttgtc
acagtacgccccagccagcctgggaagtcccctgtcactctgacatcacttcctccaggt
gttcgaatggtaatgcctgcccaaaccacccaaggatcgccaattggcagcagccctcag
atgagtggcatggcagctttagctgcagcagctgcagcaacacagaagatcccaccctcc
tccgcagggacggttctcaatgttcctgcgggtgccaccattctcaaaacggtagctgtt
tctcctggcacaaccacaatgaaaatggcttctccagtcatggtcagtaacccagccaca
cgcatgctgaagacggctgcagcccaggtgggcacagcagccggttcctcgcccaacacc
agacccatcatcactgtgcacaagtctggtgcagtcacggtagcccagcaggcacaggtg
gtaaccactgtggtgggaggagtcacaaagaccatcaccctggtcaagagtcccctcacc
atgggcagcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaaacc
aagccagtgcagacgtcggctatcacaggccaggcttccactaaccctctcacacagctc
atacagacaaagggtccgctcccagcgggaaccatcctgaagctggtgacctctgcagat
ggcaagcctacaaccatcatcaccacttcgcaggcaggaggcacaggaaacaagcccact
atcctcaacatcagtggtgtttctccttccaccacgaagcagggcaccacaatcattaag
actatccccatgtcagccatcatgacacagcctggagccacaggtcatactcgttttaca
acagctttatctcaacataataatggtgtgacgagcagtgcaggcatgaaaacgcctatt
acaattcttactacaaaggtgatgaccactggaactcctggtaaaatcatcactgcggtg
cccaaacttggtactgcggccggccaacaaggactgacgcaggtggtcttgaagggtgct
ccaggacaaccaggaactatactgcgcaccgttcccatgggcacgatgggtggcgttcga
cttgtcacacctgtgactatgtcgtccatgaagccaaatgtcaccacactcgttgtcaag
gggactactggtgtcaccacccttggaactgtcactggcacagtctcctcaagccttgca
ggaggtgcaggggacaattccagtgcctcactggtcacccctatcaccacactaggaacc
atttctaccctgtccagccaggtaatcagcccagctgccataactgtgtcagctgctcag
accagcctgacctctgcctccacactgccatcctctaccatcacagtacagaaccagccc
acacaggtgactctgatcacaactcccagtggagtagaagctcaaccggtgcaggattta
cccgtttctatcctggcttcaccaacctctgagcagcccagttcaactgaggctggggaa
ggttctggcaccgtcaccctcgtctgctctaacccaccctgtgaaacccacgagacagga
accaccaacacagccactacctcctctgctacgattggagctgggcgggtctgttcaaat
ccaccatgtgagacccatgaaacgggaaccaccaacacagccacaactgcgtcatcaaac
atgtctgcactccgtgtgtgctccaacccgccgtgtgagacccatgaaactgggacgact
aacacagcaaccacggcctcatcgaacatgggaggtgtccaacaggtgtgctccaacccg
ccgtgtgagacccatgaaactgggacaaccaacacagcaaccacagcctcatcgaacatg
ggaggcgtccaacaggtgtgctccaacccgccgtgtgagacccatgaaactgggacaact
aacacagcaaccacagcctcgtctaacatgggaggcgtccaacaggtgtgctccaaccca
ccctgtgagacccatgtgacaggaaccaccaacacagccactcaggcatcatcgaacatg
aacgctggccagacggacaccacacaggggggtttttccaacccaccctgtgaaacacag
gggacagggactaccaacaccccgtccacagcaacatccagtatgggaggtgagcagacc
agcacaacagcaggcctagttcagagggtgtgttccaacccaccctgtgaaacgcacgag
acggggaccaccaacacagccaccactgccacctgcagcatggagacaggcgaaggcaca
gcagctcagcagtcagaggaaggaaccgaaggtaccagcagcacagaggcggtgtctacc
actgcaacaactagtatggtcaccaccaccaccaccacccagggcagggccattactact
gtcacccagtctacaccagcgcctggtccctctgtaccgtcaatttcatcaatcacagag
ggtgtgagtactgtcgccagctctacagaggaaccaatgcagactgaagaggcagcatca
gcagaagctgcacctacagaggcatctactgccatggagacacaagcagaaggagaagca
gccacagcgacagatttgaacttaccctcagagctgatgtctgagggtcagggagccact
ctgatggtgacaggtctgtcagacgaggagctggctgtgactgccgcagcagaggccgcc
gctcaggcagcagccactgaagaagctcaagccctggctatccaggctgtcctccaagca
gctcagcaagctgtaatgaatgagagtgagtctgttggagatagccagcaacccaccacc
atccccatcatgctaacccagcaggagctggcggcactggtgcagcagcagcagctgcag
gaggctcaagcagcagcccaacaagctgctgtagacacaagcttacctactgagggcctg
gcccctgctgacagcctcaatgacccctctgtcgagagcaatggacacaatgagatggct
gcagctgtcaccagtgctgtagtgtctctgctgccccgcaccactgctgagacactcgct
ccatcgagcacctttgcaccctctgtagcagtggcaagtccagccaagatgcaagcagca
gcagctgctctagcagaagtcgccaatggcattgaaggagagaaacaagctcctcagcca
accccagtgaaacccattgtaaagaaagagaatcagtggtttgacgttggaatcgtaaag
gtgacaaatatggtcgtcacgcacttctacatgccaaccgatgaatctcaaggagacgac
gactctggcaccatgcctgactacagccagatgaaaaagatggagctgcagcctggaaca
gcttataagttccgcgttgctggaatcaacgcttgtggtcgtggatctttctcagagatc
tctgcattcaagacttgtttaccaggtttcccaggagctccctgcgccatcaaaatcagc
aagagcccagatggagcacacctgacctgggagccaccatctgtgacttcagggaagatc
atcgaatactccgtgtacctggctatccagagcaaccagacagccgaagcaaaggcctcc
accccagcccagctagctttcatgcgtgtgtattgtggacccaacccttcgtgcttggtg
cagtcgtccagcctctcaaacgcccacattgactacaccaccaagcctgccatcatcttc
cgcattgccgcccgcaacgaaaagggctacggtcccgccacccaagtccgatggctgcaa
gaatccggcaaagacgcggcctctgcaaaaccagcccccaaaagaccaggcacctctcct
gatactaaggttactggtccaaagaaagcaagaacggaccagtga
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integrated database retrieval system
