Solea solea (common sole): 131460712
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Entry
131460712 CDS
T10853
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131460712 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssoe01009
]
131460712 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131460712 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
ssoe03029
]
131460712 (rb1cc1)
Protein phosphatases and associated proteins [BR:
ssoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131460712 (rb1cc1)
Membrane trafficking [BR:
ssoe04131
]
Autophagy
Autophagosome formation proteins
ULK complex
131460712 (rb1cc1)
Mitochondrial biogenesis [BR:
ssoe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131460712 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Cluap1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
131460712
NCBI-ProteinID:
XP_058487424
LinkDB
All DBs
Position
1:complement(14922461..14935899)
Genome browser
AA seq
1610 aa
AA seq
DB search
MKLYVFQVNNGSTLTFNTDLAVQTVLELKHAIQTKYKIAVQHQVLVVSGGECMFAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLMMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCSLSYRKLLRKFDTSYTNYQH
DLEEIKLKLTKLGTAVSVMARIPLLESLTRQSYRASVEKSSSTAEKDSNETAEEKSTDSV
LRTTEAKTKSSTSCSASGAATCERGDQETDEMTGSGELRAALLDDDSPDFANPSSFNVTL
LDWINVQDRPNDVESVVRKCLDSISRLDPRIIQPFLADCSETISKLDNQNMKSIKGLEDR
LYALDQMIEICNKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLNNHR
KLLEIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDSEKLLALLKLLMELKERVKVVEA
LSTAPQMYCLAVVEVVRRKMFMHHYKEWAYALVKDGEQLYEAEKLKRKSFGKLFRKSFLK
NSLFRGLESWPSSSFCTQRPRGFDDELPDISLEDLQYLKSCCPLEVQPFLMIPTMCDFEP
LNRHVNSLHQLVQAAQSVDEMSQTITNLLSEQRASCCQSTPRSESIPGSLVSSKTPASLS
LHGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDLDSLAESPES
DFMSAVNEFVIEENLTSPNPISDPTSPDMMVESLYSSVINAIDHKRMQDTTTLERENLRI
TVLKQVIDKYQSAVEESQSNLKSVKDDLHHLRGLALKEQHDFCFVLKYTTTQVCKIVDNF
CHTHELKFKEQHQSELLSVRQDLEKQIETLTKENQVNQNIVRDVQRAMLDLEGLMERKEK
ELTQLENEKERWLEMESNLTDRITNLEQVISDQAEEIKVVSAARDSLTSQIENLHFEIER
SQQRIRQEMEEVKQSHLKELEVRMEQEHKAELETLTWNNQEALEHLATENSAKLSEAADH
HATALGEKDNQIKDLEARVTELAELRCKVEVELAFKESETEAVRLLFEEAKIQQSEAVKS
QVEAETKALSLELENVKQQLQAKNEEYEVDLAELRTLMRIEKDHCISELVDRHEEETVLL
RNEIFSLQQQAQDTERNHAELQEQLKQAVDQQLALKEEKDKELRSFQELEQELRTVINKV
QAENDLLSKKVEQDREAKEKDEEKQESAKVPPPDAFKELEQQKEEMEKRLLEKIQQLETE
LHELQSSRSDEGLPLHDEGHTDSAAPLSLDSALEERLQQERASLQSQMELLEKKKNEEMQ
NLKTSLIAEQQTNFNTVLTREKLKKEQIINDITEKLQKVTQQQEKDKALIETLSEDRASV
MQEKKYLEEELNRMRSTALVSSAFFSPHLSALEITEAGGATARALPVAGACSSESTGDGD
RLASVATIQDDEHVDSAVEASMVTVHDNILMSEEKQRILLLERTLHMKEEENKRLSQRLM
SQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLTALDLK
PASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacgtttaatacagatctt
gctgtccaaactgtactagagctcaaacatgccatccaaaccaaatataagattgcagta
caacatcaagtccttgttgtcagtggtggggaatgtatgtttgcagagagacgagtctgc
agctacagtgcaggcactgaaaccaaccccatattcctgtttaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctcgattgagagtgagattcaggtc
aaggtggaggagtctctaatgatgccagctgtttttcacaccgttgcctcacgaacacaa
cttgctctggaaatgtttgaagttgccaaaaaactttgctctttctgtgaacgtttggtt
catgatgaacaccttcaacaccaaggctgggctgccattatggctaatctggacgactgc
tctctgtcttatcggaagttgcttaggaaatttgacacttcatacacaaattatcaacat
gacttggaagaaattaagctgaaacttacaaagttagggacagcagtttctgtaatggca
aggatacctttgctggaaagtttgacgagacaaagttatagagcgagcgtagagaagtcc
agttcaaccgcagaaaaggattcaaatgagacggcagaagaaaagtccactgattctgtg
cttcgcaccactgaggcaaagacaaagtcatctacgtcctgctctgcttcaggggcggcc
acgtgtgaacgtggtgaccaggaaacagacgaaatgactggcagtggtgagctgagagct
gccctactggatgatgactctccagattttgctaacccatcctccttcaatgtcacacta
ctagactggatcaatgttcaagacagacccaacgatgtggagtcggttgtaaggaaatgc
ttggattccatcagtcggcttgacccacggatcattcaacccttcctggcagattgcagc
gaaacaatttccaagctggataatcaaaacatgaaatccatcaaggggcttgaggacagg
ttgtacgctctagaccaaatgattgaaatctgtaacaagttggtgaatgaacaaaaagag
cttgctcagggatttttggccaatcagaagcgggctgaaaacctgaaggatacatctgtt
ctgcctgacttgtgtctgagtcacaccaaccagctgatgatcatgctgaacaaccacagg
aagctgctagaaatcaaaaagaagtgcactactgccaaacaagaacttgcaaacaacctt
caagtccgactcaaatggtgctgctacgtgatgcttcatgcagaccaggacagtgagaaa
cttctggctctactcaaacttctgatggagctgaaggaaagagttaaagtagtcgaggcc
ctcagtactgcgccccagatgtactgcttggcggtggtggaagtcgtcaggaggaaaatg
tttatgcaccactacaaagagtgggcttatgcgcttgtgaaggatggggaacagctatac
gaggcagagaaactgaaaaggaaatcttttgggaaactctttaggaaatctttcctcaaa
aatagtttatttcgaggacttgaatcgtggccttcatcgtcattctgcacacaaaggccc
agagggtttgatgatgaacttccagacatctcccttgaggatctgcagtacttgaaatct
tgttgtcctctagaggtccagcctttcctcatgattcctacaatgtgtgactttgaaccc
ttaaatcgtcacgtaaactcccttcaccagctggtccaagcagcacagagtgtggatgag
atgtcccaaactataacaaacttgttaagtgaacaaagggcatcctgttgtcagagcacc
ccacggtctgaaagtataccagggagcctggtgtcctccaaaactcctgcctcccttagc
cttcatggacccagctgccaacctcttcatgtcccagtcccagctcctctagaggacttg
tccccagacagcatcgatgcacaaacatttgattttgaaaccattggtcatccaaacatg
gatccagtcctgcaacagggctctcttgacctggattctctagcagagagccctgaatct
gacttcatgtcagctgtcaatgagtttgtgattgaagagaacctgacctccccgaaccct
atcagtgaccccactagccctgatatgatggtagagtcactgtactcttcagtgatcaat
gctatcgaccataagcgcatgcaggacaccacaacactagaaagggagaatttaaggatc
actgtccttaaacaagtcattgataagtaccagtccgctgtagaggagtcgcaatccaac
ttgaagagtgtgaaggatgacctccatcacttacgaggtctagcgttaaaagagcagcat
gacttttgcttcgtcctgaagtatacgaccacacaagtgtgcaaaattgtggacaacttc
tgccacactcatgaacttaagtttaaggagcagcatcaaagtgagcttctctctgttcgg
caagacctggagaagcagattgaaacactaacgaaggaaaaccaagtgaatcagaatatt
gttagagatgtccagcgtgcaatgcttgatttagaggggctcatggagcgcaaagagaaa
gaactcactcagcttgagaatgagaaagagcgatggcttgaaatggagagcaacctcaca
gatcggatcacaaatctggagcaggtgatcagtgatcaagctgaagagatcaaagtggtc
tcagctgctagagactccctgaccagtcagattgagaatctgcactttgagattgaacgt
agccagcagaggattcgacaggagatggaagaagttaagcaatctcacttaaaggagctg
gaagtcagaatggagcaggaacacaaggcagaactggagactcttacctggaacaatcag
gaggctctggaacatctggctactgaaaatagtgcaaagttaagtgaggctgcagatcac
catgccactgctctcggagagaaggacaaccaaatcaaggacttggaggcacgcgttact
gagcttgcagaactccgctgcaaagtagaagtggagcttgccttcaaagagtcggagacg
gaagcagtgaggctcttatttgaggaggccaagattcaacaatctgaggctgtgaagtct
caggtagaagctgagaccaaagcccttagcctcgagttagaaaatgtcaaacagcagctt
caggctaaaaatgaggagtatgaagttgacctagcagaactgaggactctcatgaggatt
gagaaggaccactgcatctcagaactggtggacagacacgaggaagaaacagttttgttg
cgcaatgagatcttctctctgcagcagcaagcccaggacacagagaggaaccatgctgag
ctgcaagagcaacttaaacaggctgtagaccagcagcttgctctaaaagaagaaaaagac
aaggagttgaggagtttccaagaactggagcaagagctaaggactgtcatcaacaaagta
caggcagaaaatgacctgctctctaaaaaagtagaacaggacagagaagcgaaagagaaa
gatgaagaaaaacaagagtcagccaaggttccgccaccagatgcctttaaagagttggag
cagcagaaagaggagatggaaaagcgactgttagagaaaattcaacaacttgagactgag
cttcatgagctccagtcctccagaagtgacgaaggcctgccactgcacgacgagggacat
acagatagtgcggcacctctctctctggactcagcgctggaggagcggctacagcaggag
agggcctccctgcagtcccagatggagctcctggagaagaagaagaatgaggaaatgcag
aacctcaagacatcgctaattgcagagcagcagactaactttaacaccgttctaacccga
gagaagctgaagaaggagcagatcatcaatgatattactgaaaagttgcagaaagtaact
caacagcaggaaaaggacaaagctctgatagagactctgtctgaggaccgggcgagtgtc
atgcaggagaagaaatacttggaagaagagcttaatcgcatgcgcagcacagcgctggtc
tcctctgccttcttctctccccacctgtcagctctggagatcacagaggctggaggagcc
acagccagagctctgcctgttgctggggcttgttcctctgagtccacgggtgacggcgac
agactggcgtctgtagcaaccattcaagatgacgaacatgttgattcagcagtggaggcc
agcatggtgacagtccacgacaacatcctaatgtcagaggagaagcagcggattctgctg
cttgagaggactttacatatgaaggaagaagaaaacaagcgcctcagtcagagactgatg
tctcaaagcatgtcgtctgtgtcgtcacggcattcagacaaaatagccatcagagacttc
caggtaggcgatttggttctgatcatcctggatgaaaggcacgataactacgtgctgttc
acagtcggtcccactctctacttcctccactcagagtctctcaccgccctggacctcaaa
ccagcatcaggggcttcaagacggccgtgggtacttggaaaagtgatggagaaggaatat
tgccaggcaaaaaaggcccagaacaggttcaaggttcctttaggaaccaagttctacaga
gtgaaagctgttccgtggaacagaaaagtatag
DBGET
integrated database retrieval system
