Solea solea (common sole): 131461066
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Entry
131461066 CDS
T10853
Symbol
pdzrn3b
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ssoe Solea solea (common sole)
Brite
Enzymes [BR:
ssoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131461066 (pdzrn3b)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
131461066 (pdzrn3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131461066
NCBI-ProteinID:
XP_058488039
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Position
6:complement(17112755..17214435)
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AA seq
1047 aa
AA seq
DB search
MGFELDRFKETVDPDFKCNLCNKVLEDPLTTPCGHVFCSGCVLPWVVQQSSCPVKCQRIS
TKELNHVLPLKNLILKLEIKCDNHARGCDAVVKLQHLAEHAEMCEYSPAKCRNRGCSEVL
SLRDMDAHVRDTCDHRPVGICESGCGLMLSHKEQKSNGHCCVRALKAHNSALHYKILTLD
RELKTQTIKANKREKSLLAQLSAVHSELQMTALKYQKKFTEYSERIDSLTKSVAISCKEG
ETKSTTVVLLREGGSLGFNIVGGRPCVDDNDGTSNEGIYVSKIVESGPADKEGGLQIQDR
IIEVNGKDLSKATHDQAVEAFRTAKEPIMVQVLRRAPLPKLVSPTADTQVSDTSTQTDIT
LQHIMALTKLPPASPPMTELEEYLLTDENPPGHAYFDPNDFLEGIQQDIEREELEYEEVD
LYRANIQDKLGLTICYRTDDEDEAGIYISEVDPNSIAAKDGRIREGDKIIQINGVEIQNR
EDAVVLLTSESNQNISLLVARPEMQLDEGWMDDDRNDFLDDLHMDMLEQQHHQAMQFTAS
MLQQKKHEEDGGTTDTATLLSNHHEKDSGVGRTDESTRNDESSEQENVGDDQTTASNTLG
SCRKLTYSQDTLGSTDLPFSSESFISADYTDTDFLGIPADDCERFRELLELKCQMRSSAA
QGLFYQSGGAGGQDQEIVDKELELLNEELRTIELECLNIVRAHKMQQLREQCRESWMLQD
SGFRNYNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRRGA
ENQGQAGASSSNSRIPKPLLSPVQEVSGPSRSRGSSKDQDGALQAESKERKSGESSKSGR
SCSHPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCRDPISPGDLEPKM
EWKVKIRSDGTRYITKRPVRDKLLRERALRIHEERSGMTTDDDAISELKMGRYWSKEERK
QHAVRAKEQRQRREFMKQSRADCLRDQSGAEDKKEPNIIELSHKKMMKKRNKKIFDNWMT
IQELLTHGTKSPDGTRVYNSILSVTTV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggaccgatttaaggagaccgtggacccggatttcaaatgcaacctg
tgcaataaagtcctggaggacccactaacgactccgtgtggccacgtcttctgctccggc
tgcgtgttgccgtgggtcgtccagcagagcagctgccccgtcaaatgtcagcggatctcc
accaaagagctgaaccacgtcctgccgctgaagaacctcatcctgaagctggagatcaaa
tgtgacaaccacgcgcggggctgcgatgccgtggtgaagttgcagcatctggccgagcac
gcagagatgtgcgagtactccccggccaagtgccgcaaccgaggatgcagcgaggtgctt
agcctgcgggacatggatgctcatgtgcgggatacgtgcgaccacaggccggtggggatc
tgcgagagcggctgcggcttgatgctcagccacaaggagcaaaagtccaatggccactgc
tgcgtgagagcgctgaaggcgcacaacagcgcgctgcactacaagatcctgaccctggac
agagagctgaagacgcagaccattaaagccaacaagagggagaagtcgctgctggcgcag
ctttccgccgtgcacagtgagctgcagatgactgcgctgaaatatcagaagaaattcact
gaatacagcgagaggatcgactctctcaccaaaagtgtggctatctcgtgcaaggaaggt
gagactaaaagcacgacggttgtccttctccgcgagggtggatctctgggttttaacatc
gtaggaggaaggccatgcgtggatgataatgacggcacttcaaatgaagggatctacgta
tccaagatcgttgaaagcggtccagcagacaaagaaggtggccttcaaatccaggacaga
ataatagaggttaatggcaaagacttgtccaaggccacacacgaccaggcagtggaggcc
ttccgcaccgccaaggagcccatcatggtccaggtcctgcgccgggctcctctccccaaa
ctggtcagccccaccgctgacacccaggtgtcggacaccagcactcagaccgacatcacc
ctccagcacattatggcactcaccaagctgccccctgcttcgccccccatgacggagctg
gaggagtatctgcttacagatgagaatcctccgggacatgcgtactttgacccaaatgac
ttcctggagggaatacagcaggacatagaacgcgaggagctggaatatgaggaggtggat
ttgtaccgagcaaatatccaggacaagctcggcctgaccatctgttataggactgatgat
gaagatgaagctgggatctacatcagtgaggttgatccaaacagcattgctgcaaaggac
ggcaggattagagaaggggacaaaatcatccagatcaacggtgttgagatccagaataga
gaggatgctgtagtactgctgaccagtgagagcaaccagaatatctccctcctggtggcc
agaccagagatgcagctggatgaaggttggatggatgacgacaggaacgacttcctggat
gacctccacatggacatgctggagcagcagcaccatcaggccatgcagttcactgccagc
atgcttcagcagaagaagcacgaagaggacggaggcaccaccgacacagccacgctgctg
tccaaccaccacgagaaggatagcggagtcggccgcacggatgagagcacacggaatgac
gagagctcagagcaggagaacgttggtgatgaccagaccacagcctccaacacgctgggt
agctgcagaaagctgacctacagccaggacacgctcggcagcaccgacctgccctttagc
agtgagtcattcatctctgcagactacaccgacacagactttctgggcatcccggccgac
gactgtgagcgcttcagggaactcctggagctgaagtgccagatgaggagcagcgcagct
cagggtcttttctaccagagcggaggagcgggaggtcaagaccaagagatcgtggataag
gagctggagctgctcaacgaggagttgcgcaccatcgagcttgagtgcctcaatatcgtc
cgcgctcacaagatgcagcaactgcgggagcagtgccgggagtcctggatgctccaggac
agcggcttccgcaactacaacacgagcatcgatgctcgccgccatgagctctcagacatc
acggagcttccagagaaatcagacaaagacagctccagtgcttataacactggtgagagc
tgccgcagcaccccactgacacttgagctgtctccagacaactcgctccgtcgaggagca
gagaaccagggtcaggctggagcatccagctccaacagcaggatccccaagcccctcctg
tctcctgtgcaggaagtcagcggccccagccggagcagaggctcctccaaggatcaagat
ggtgcactacaggcagaaagcaaagagaggaagtcgggagagtccagcaagtctggtcgg
agctgctcccatccacattcaccttataaacacgctcacatccccgctcatgcccagcac
taccagagctacatgcagctgatccagcagaagtcagcagtggagtacgcccagagccag
atgagtctggtcagcatgtgccgggaccccatctccccaggtgacctggaacccaagatg
gagtggaaggtgaagatccgcagcgacggcacacgctacatcaccaagcgccccgtcaga
gacaagctgctgagggagcgcgccttgcggattcacgaggagcgcagcgggatgaccaca
gacgacgacgccataagcgagctgaagatgggccgctactggagcaaggaggagaggaaa
cagcacgccgtccgtgccaaggagcagagacagcggcgcgagttcatgaagcagagccgg
gccgactgtctgagagaccagagtggtgccgaggataaaaaggagcccaacatcattgaa
ctcagccacaaaaagatgatgaaaaagaggaataagaaaatatttgacaactggatgacg
atccaggaactgctgacccacggtaccaagtcgccagatggcaccagggtttacaactca
atcctgtctgtgaccacagtctaa
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integrated database retrieval system
