Solea solea (common sole): 131461182
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Entry
131461182 CDS
T10853
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131461182 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoe03021
]
131461182 (smarcd1)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131461182 (smarcd1)
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131461182 (smarcd1)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131461182 (smarcd1)
PBAF complex
131461182 (smarcd1)
GBAF(ncBAF) complex
131461182 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
131461182
NCBI-ProteinID:
XP_058488222
LinkDB
All DBs
Position
6:complement(7380989..7395395)
Genome browser
AA seq
514 aa
AA seq
DB search
MAARGGFQTAPTGGGGGSMGPGPPVPGAGPVMGPGTPTGRMGPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGGSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgaggggggtttcagacggcaccgactggtggtggcggcggatcaatggga
cctggaccaccggttccgggcgcaggaccagtcatggggcccgggactccaactggaagg
atgggaccgtcatcggccgcgcagaaccacatgtaccgctccccgatgcccgggcctgga
tacccgagaccaggcatgcctccatccagccgtatgaccccacagggaccagccatgggc
cctccaggatatggcggcagtcccgtgtctcgtcctgggatgccaggtgttatggatcca
tctcgtaagaggccagcgcctcagcagattcagcaggttcagcagcagaaccgcaaccaa
cacacaaagaagaaaaagatggctgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctgctggcttttgagaggaagctagaccagaccatc
atgcgcaaaaggctggacattcaggaggccctcaagaggcccattaagcaaaagagaaag
cttcgtatcttcatatcaaacaccttcaaccctgcgaagccagatgcagaggatggagaa
ggcacagttgcatcgtgggagctacgtgttgagggacgcctgttggaagatacggctgtg
tctaaatatgaagccaccaaacagaaaaggaagttctcttctttcttcaagtccctagtg
attgagttggacaaggacctgtatggtccagacaatcatcttgtggaatggcataggact
gctaccacccaggagactgatggtttccaggtgaagaggcctggtgatgtgggtgttcgc
tgcaccgtcctgctcatgcttgactaccagcccccgcagttcaagctggacccccgactg
gcccgtatgctgggcatccacacccagaccagacctgtcataatccaggccctgtggcag
tatgtcaagacccacaaactccaggaccctcatgagcgggagttcatcaactgtgacaag
tacctgcagcagatttttgaaactcagcgtatgaagttctctgagattcctcagcgcttg
catgcactcctgatgcctccagagcctatcatcatcaaccatgtgatcagcgtggacccc
aatgaccaaaagaagactgcttgttatgacatcgatgtggaggtggacgacacactgaag
acccagatgaactctttcttactctccacagccagtcagcaggaaatagcggggctggac
aacaagatccatgaaaccatcgagaccattaaccaactgaagacccagagagagttcatg
ctgagctttgccagagatcctcagggctttatcaatgactggttgcagtcccagtgcaga
gacctcaagaccatgacggatgtggttgcaaacccagaagaagagcggagggctgagttt
tattatcagccatgggctcaggaggccgtctgtcgctacttctactccaaggtccagcag
aggcgacaggagctggagcaggcgctcggtatcagaaacacctaa
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