Solea solea (common sole): 131461198
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Entry
131461198 CDS
T10853
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssoe00535
]
131461198 (optc)
Proteoglycans [BR:
ssoe00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
131461198 (optc)
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
LRR_14
aq_1923
Motif
Other DBs
NCBI-GeneID:
131461198
NCBI-ProteinID:
XP_058488248
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All DBs
Position
6:complement(13202865..13206342)
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AA seq
320 aa
AA seq
DB search
MWSRMVASVLVLVFLSSCPGIEPLPVEPDDDVFHMENYDLNTEIEWENMDVNVFGDDYDY
DYLDQEDGKAPNTPLPATQPTARHYEEAITPTPAPVSLDFEGPGLFGPETGLGMPTCILC
MCIGGSVYCDDMGLDQIPPLPKGTTHFYGRFNKLRHVKNTDFFNLNKLQSIDLTGNQISG
MDEDVFHSLTQLQELLLADNNMQVLPELPVNLKRVDLRNNKLMSRGLHSEGFKDMSHLEF
LYLSGNNLDYIPIPLPLSLKVLHLQDNNIQLLQEDTFCNQHDPNFIRRNLEDIRLDGNPL
NINLFAQAYVCLPRLPVGNH
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcacggatggtggcttctgtcttggtcctggtcttccttagctcctgccctggc
atagaacctcttccagttgagccagatgatgatgtttttcacatggagaactatgacctg
aatactgagattgaatgggagaacatggatgtcaacgtttttggagatgattatgattac
gattacctggatcaagaggatggaaaggcaccaaacacccccttacccgctacccagccc
acagctcgacactatgaggaggcaataacaccgactccagctccagtgtccctggacttt
gagggcccaggactctttggccctgagaccggcctgggtatgcctacttgcatattatgt
atgtgcattggtgggagtgtgtactgtgatgacatgggcctggatcagatcccacccctg
cccaaaggcaccacccatttctatggccgcttcaacaagctccgtcatgtcaagaacaca
gactttttcaatcttaacaagctccagtctatcgatctaactgggaaccagatctcaggg
atggatgaggatgtgtttcactctctgacacaactccaggagttattgttggccgacaac
aacatgcaggtcttgcctgagctgccggtcaacttgaagcgcgtagatctacgtaataac
aagctgatgagtcgtgggttacattctgagggttttaaggacatgagtcacctggaattc
ctctatctgtccggcaacaacctggattatattcctataccactgccactgagcctgaaa
gtgttacacctgcaggacaacaacatccagttgctgcaagaggacactttctgtaaccaa
catgatcccaactttatccgccgaaacctggaggacatccgtctggatggtaaccccctg
aacatcaatctgtttgcccaggcgtatgtctgtcttccacgtctgcctgtaggtaatcac
tga
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