Solea solea (common sole): 131461333
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Entry
131461333 CDS
T10853
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131461333
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131461333
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
131461333
NCBI-ProteinID:
XP_058488481
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All DBs
Position
6:complement(26306889..26351121)
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AA seq
650 aa
AA seq
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MVDPSPPVLHLLSGGNVSMAGVGVKLEQEEFGEGGGVIATNADPPKTSPSRDWAGNQPVE
ARQLTPPLSRSPSEGSPGKDLTHGQSPMGLKEIRTHDQPHGQSSFKEVMPTIEKLLNTDW
KEKLLDKSTVGAGQLKGTPESLAEKELQLLMMINQLSGLREQLLGAHSEQRNMAALLLEK
QQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFHHSTQPLPVTS
DSQMTLPLQPIPCKPAVDYPMQLLPSPHPTPVKRSSGSFRQEASQPLNLTSKPKGLELGK
TPSPQSLELGTLALQGAYRPRDLQRDSPPRSALSFLGDGDVVSQAIHDAQQLLKNHSSGG
RERGERGRERDSAGKMEYKGSPHSERISHSERGEDRHEDHLSSDSEGALPVTVPGSYSEA
RPPPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYE
EQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRRQEQRATYTHSQPEP
QQIHYSHSDGQYPGAAGSVSMATMPFHPALLEHYLPQVPPAPHRAESHATPTALPRERER
ERERERERERERERERERERERERERPLYSEGEESDGGERSEGELVLLTD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcccagccctccagtgctgcacctcctctctggtgggaatgtcagcatggca
ggagttggtgtcaaactagaacaggaggagttcggcgagggaggcggagtcattgcgacc
aacgccgatcctcccaaaacatctccttcacgtgactgggcaggaaatcagccggtggag
gctcgacagctgacgccgccactgtcccgctctccctcggagggctctccaggtaaggac
ctgacacacgggcagagccccatgggactgaaggagatcaggacacatgaccaaccacac
gggcagtccagcttcaaagaagtgatgccgaccattgagaagctgctgaatacggactgg
aaggagaaactcttggataaaagcacagtgggggcaggacaactcaaaggaaccccggag
tctctggcagagaaggagctgcagctgctgatgatgatcaaccagctgagcggtctcagg
gagcagctcctgggagcccactctgagcagaggaacatggccgcgctgctgctggagaag
cagcagcagcagatggaactggctcgacagcagcaagaacagattgccaaacagcagcag
cagctgatccagcagcagcacaagataaacctgctccagcagcagatccagcaggtgaac
atgccctacgtgatgatcccggccttccaccacagcacacagcctctccccgtcacctct
gactcccagatgaccctgccactgcaaccaatcccctgcaagccagcagtggactatccc
atgcagctgctcccaagccctcatcccacccccgtcaagaggagcagtggttccttccgg
caggaagcgagtcaacccttgaacctgacctctaagccaaaggggctggagctggggaaa
acacccagtccacagagtctggagctgggcaccctggcactgcagggagcctacagaccc
agagacctgcagagagacagtccaccacgatctgccctcagtttcctcggcgacggcgat
gtggtcagccaggccatccatgatgcccaacaactcctgaagaaccacagcagcggaggg
cgggagaggggggagagagggcgggagagagacagcgctggaaagatggagtataaaggc
tctcctcacagcgagagaatctctcactctgagcgaggtgaagacagacatgaggaccat
ctcagcagtgactctgagggtgctctccccgtcaccgtgccaggcagctactcggaggct
cggccccctccctcctcgggccacattaagaggccgatgaatgccttcatggtgtgggcc
aaggacgagcgcaggaggatcctgcaggctttccctgacatgcacaactcctccatcagc
aagatcctgggttccaggtggaagtctatgtccaaccaggagaagcagccgtactatgag
gagcaggcgcggctgagccggcagcacctggagcgttaccccgactacaagtacaaaccg
cgacccaaacggacctgcatcgtggagggacggcggctgagggtgggcgagtacaaggcc
atgatgaagagccgccggcaggagcagagagccacatacacacacagtcagccagaacct
cagcagatccactactcccacagcgatggccagtaccccggcgccgctggctcggtctcc
atggcaaccatgccctttcaccccgcgttgctggagcattacctgccgcaggtgccgccc
gccccacatcgagcggagagccacgccacgcccaccgccctgcccagggagcgagagagg
gagcgagagagggagcgagagagggagcgcgagagggagcgagagagggagcgcgagagg
gagcgagagagggagcggcctctgtacagtgaaggagaggaaagtgacggaggagagaga
agtgagggagaactggtgctcctgacggactga
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