Solea solea (common sole): 131462100
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Entry
131462100 CDS
T10853
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04137
Mitophagy - animal
ssoe04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
131462100 (rabgef1l)
04137 Mitophagy - animal
131462100 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131462100 (rabgef1l)
Membrane trafficking [BR:
ssoe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
131462100 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
131462100 (rabgef1l)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
BREX_BrxC_helical
Motif
Other DBs
NCBI-GeneID:
131462100
NCBI-ProteinID:
XP_058489009
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All DBs
Position
7:17884593..17896257
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AA seq
506 aa
AA seq
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MMSQRRGIHLDQSELLCKKGCGFYGNNAWHGFCSKCWREENQREKQKQIQEDWALAERLQ
KEEEEAYASRHQKAQSQPTITPFNKFEERKTKEKSSKVHTVTKFFIPSTKTPPRKDAASL
DTQSSPSPSSSASRHSSVDSDHATREFIDFLKPLKSGREIFKQCRAFTETMVYKRDMAAD
ELSECVQDFYQNLSDRLHTQFKGSSDHVESIMDEVEKYMMTRLYKEVFCPETTDDENKDL
AIQKRIRDLHWVTIEMLCVPVDEEIPEVSDRVVKAITDVIEMDSKRVPKDKLACITRCSK
HIFNAIKVSKKEAASADDFLPTLIYIVLKANPPRLHSNIQYITRFCNPSRLMTGEDGYYF
TNLCCAVAFIEKLDGQSLNLSTEEFDLYMSGKASPHWPQTSGASSSSPGGTALNQVHKRL
DLLTGLGERQERVIEKARQLESDLIDWTDEVEQKVQSVLESFSPEAQNPAATVASGTTSA
ASSAIDSDNVENELLPPPLQPQVFAG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccagcggcgtggtatccatctggaccaatcggagctgctttgcaagaaagga
tgtggtttttatggcaacaatgcctggcacggcttttgttctaagtgctggcgagaggag
aatcagcgagaaaagcaaaaacagattcaagaagactgggcacttgcagaaaggcttcag
aaagaggaggaggaagcatatgcaagcagacatcagaaggcccagtcacagccaacaatc
actcccttcaataagtttgaggaaagaaaaacaaaagaaaagtccagcaaagttcacaca
gtcacaaagttttttattccttccacaaaaacaccaccaagaaaagatgctgcttcctta
gatacacagtccagcccaagcccgagctcctctgcaagtcgacattcctctgtggacagt
gatcacgcaacccgagagttcattgattttctcaagcctctgaagtctggcagggagatc
ttcaaacagtgccgcgccttcacggagaccatggtctacaagcgagacatggccgctgat
gagctgtcggagtgtgtgcaagacttctatcagaacctctcagatcgtctccacacccag
ttcaaaggttcctcagatcatgtagagagtattatggatgaagtagagaaatacatgatg
acccgtctttataaggaagtgttctgtcctgagaccacagatgacgagaacaaagacctg
gccattcagaagagaatcagagacttgcactgggtcactattgagatgctgtgtgttcct
gtagatgaggagatcccagaggtctctgacagggtcgtcaaagccatcacagatgtaatt
gaaatggattcaaagcgtgtgcccaaggacaaactggcttgcatcactcgttgcagcaag
cacatcttcaacgccatcaaagtcagcaagaaagaggctgcgtctgctgacgacttcctc
cccacactcatctacatcgtgttgaaagcaaaccctccacgactacactccaacattcag
tacatcacccgcttctgcaaccccagcagactcatgacgggagaggatggttactacttc
actaatttgtgttgcgcagtggccttcattgagaagctggatggtcagtccctgaacctg
agcactgaggagtttgatctctacatgtcgggcaaagcgtcccctcactggccacaaacc
agtggagcttcttcctcctccccgggcggcactgctcttaatcaagtccacaaacggctg
gacctgctcacagggctcggggaaaggcaagagcgagtcatagagaaggctcgacaactt
gagagcgacctaattgactggacagatgaggtggagcagaaggtgcagagtgttctggaa
agcttttcaccagaggcacaaaaccctgctgcaaccgtggctagtgggacgacgtctgcg
gcctcgtcagctattgactcggataatgtggagaacgagctcctgcctccaccactgcaa
ccacaagtgtttgctggttga
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