Solea solea (common sole): 131462119
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Entry
131462119 CDS
T10853
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04136
Autophagy - other
ssoe04140
Autophagy - animal
ssoe04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131462119 (atg16l1)
04136 Autophagy - other
131462119 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
131462119 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131462119 (atg16l1)
03029 Mitochondrial biogenesis [BR:
ssoe03029
]
131462119 (atg16l1)
Membrane trafficking [BR:
ssoe04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
131462119 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
131462119 (atg16l1)
Mitochondrial biogenesis [BR:
ssoe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131462119 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
eIF2A
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
PUMA_CC
ADIP
DUF7310
NET2A
FKBP15
DUF4200
AP5B1_middle
HEF_HK
DUF2730
Lipoprotein_6
DUF1664
Motif
Other DBs
NCBI-GeneID:
131462119
NCBI-ProteinID:
XP_058489051
LinkDB
All DBs
Position
7:18568525..18578457
Genome browser
AA seq
603 aa
AA seq
DB search
MAERLVECAWKRHVSEQLKHRDRVQRHAFEEIVHHYHRLLEKSDLQTVLTERYQSDKYDV
QRGHETSSGADASRNDALQQEMAQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNEAKLSEYQQQIDNLEGDCRELRNYLQDLERANQTLKDEYDALQITFAALEGKLRKT
TEDNQELVSRWMAEKAQEANRLNAENEKEGRRRQAKLQKELADAAKEPLPIEPDDDIEVL
DPGKGGETSPNRPLSRTPSKKISQPPPGGLLDSISNIFGRRRSTNSFGTSPENTETPSGV
CADVRVPSTALHVFEAHEGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCECKGALTG
SNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIV
SGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESIVRD
LELQGRVTSLDLNHDRTELLTCSRDDVINIIDLRTNAIRQTLRAQGFKCGADWTRVTFSP
DGSYVAGGSADGALYVWNVLTGKVDRTLDRNHNSAINAVSWSPSGAFVASVEKGSKAILW
SDM
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggctggtggaatgtgcgtggaagagacacgtgtcggaacagctgaaacac
agagaccgagtgcagagacatgcctttgaggaaattgtccaccactatcatagactactt
gagaagtctgacctccagactgtcctgacagagcgataccagagcgacaaatatgatgtc
cagaggggacatgagaccagttctggggcggacgcaagtcgcaacgatgctttgcagcag
gagatggctcagatgagaatcaaacatcaggaggaactaacggagctacataagaagcgg
ggagagcttgctcagagtgtgattgaactgaacaaccagattcaacagaaggacaaagag
atccagagcaatgaagccaagttaagtgagtatcagcagcagatcgataaccttgagggc
gactgtcgggaactcaggaactacctgcaggacctggagcgagccaatcagacactaaag
gacgagtatgacgccctgcagatcacttttgccgccctggagggcaaactgaggaagacg
acagaggacaaccaggaattggtctcacgctggatggccgagaaggctcaggaagccaac
cggctaaacgccgagaacgagaaggaaggcagacgcagacaggctaaactacagaaggag
ctggcagatgctgccaaggagccgctgcccattgagccggacgacgacattgaggtcctg
gacccagggaagggaggagagacatcacccaacagaccacttagcaggacacccagtaag
aaaatatctcagccaccccctggtggtctcctagactccatctccaacatctttggcaga
cgtcgatcaacaaactcattcggtacttcacccgaaaacacggagacgccgtcgggagtg
tgcgcagatgttcgagtcccatccactgctctgcacgtctttgaagcacatgaaggcgag
gtgaacgcagtcaggttcagccctggctctcgtctcctggcaacaggagggatggaccgc
agggtgaagctgtgggaggttgtttcaggtcgttgtgagtgtaaaggagctttaactggc
agtaacgcgggaatcaccagcatcgagtttgatagtgctggttcgtacctgcttgccgcc
tcaaatgattttgctagtcgcatctggacagtggacgactacagactgaggcacaccctg
acgggtcacagtgggaaggttctttcagctcgtttcctattggacaacgcgcgcattgtt
tctggaagctacgaccgaactcttaaactgtgggacctgcgcagcaaagtttgtatgaaa
acggtgtttgctggctccagctgtaacgatattgtgtgtacagagcagtgtgtgatgagt
ggacactttgacaagaaggttcgattctgggacatcagagcagagagcatcgtcagggac
ctggagcttcagggcagagtcacatctctggatctgaaccacgacagaactgagctgctc
acctgctccagagatgatgtcatcaatatcattgacctgcgcaccaatgccatcagacaa
accctcagagctcagggctttaagtgtggagctgattggaccagagtcaccttcagtcca
gacggcagttacgtggcaggaggatcagctgatggcgcgctgtatgtgtggaacgtcctg
acggggaaggtggaccggactctggaccggaaccacaactcggccatcaacgcagtgtcg
tggtcgccatcaggagcctttgtggcgagtgtggagaaaggcagcaaggccattctgtgg
tctgacatgtga
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