Entry |
|
Symbol |
nup58
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Name |
(RefSeq) nucleoporin p58/p45 isoform X1
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KO |
|
Organism |
ssoe Solea solea (common sole)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ssoe00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131462240 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ssoe03019]
131462240 (nup58)
Messenger RNA biogenesis [BR:ssoe03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131462240 (nup58)
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
1:40532543..40543919
|
AA seq |
597 aa
MSGFNFGAGALGATNPGGGFSFGAVTSTPVANTGNFGAALGTAAPTSTTSTAAASLGLGG
SLFAQKPTGGFSFNTPASSAAAPTTGFALGAPASTAATTGFSLAFNKPTASATPFSLTTT
ATTSSSAPAGAGLTFGSILTSTAPQQPAPTSFGLGLGAVTSNAAASTVPSLGGSLFSNTA
ATGLGQTTLGGAGLTFGSLLAPSTTVSVAPAPSLGLGGVDFSTSSENKSDSSSGANAQDS
KALKDENLPAVICQDVENFQKFVKEQKQVQEDISRMSSKAITKVQDDIKNLKQLLSVSAS
GLQRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVEQFEVQLQQ
YRQQIEELENHLTTQSSGSHITPQDLSLAMQKLYQTFVAQAAQLQSAHENVKILKHQYLS
YRRAFLEDSTDVFESKRATNRKWQSAPRVTTGPAPFSSVPNAAAVAMAATLTQQQQPTPG
TQAALGAGFGNPFASTVGSSLGSSTVGGFGGGPAFGGVGTGGSSFAFSSTSKPTGGSLSA
GFGSASSSGFNFSNNPGINPSAGLTFGVSNPPAAGFGTGGSFLQLKKPPAGNKRGKR |
NT seq |
1794 nt +upstreamnt +downstreamnt
atgtcgggtttcaactttggtgcgggggctcttggtgcaaccaacccgggtggtggcttt
tcatttggagcagtaacaagtacaccagtggccaacactggcaacttcggggccgccctt
ggaacagcagcccctacctccaccaccagcacagccgccgcatctcttggtttgggaggc
agtctttttgctcagaaacccactggaggattctcttttaacacgcctgcctcaagcgct
gctgcacctactacaggctttgctttaggtgcccctgcttcaacagctgctactacagga
tttagcttggctttcaataagcctactgcctctgctacaccattctccctcaccaccact
gctaccacctcctcgtcagcccctgctggtgcaggtttaacatttggctccatcctgaca
tctacggctccacagcagcctgcacccacatccttcggccttggtcttggtgcagtaaca
agcaatgcagcagcctcaacagtcccatcgttgggagggagcctcttctccaacactgcc
gctacaggtttgggtcagaccactctcggaggagctgggttaacattcggttcactcttg
gctccatccacaacagtatcagtggccccagcccccagtcttggcctgggtggagtggac
ttcagcacttcctctgagaataagagtgactcatcgtctggagccaatgcacaggacagt
aaagctttaaaagatgaaaacttgcctgcagtcatttgtcaggatgttgagaatttccag
aaatttgtgaaagagcaaaaacaggttcaggaggacatcagcaggatgtcatctaaagcc
attactaaagtccaagatgacatcaagaatctaaagcagctcctctctgtcagtgccagt
ggtctgcagcgccaagctttggctattgacaaattaaagctggaaactgcgcaggagctg
aaaaatgctgacatagcactgcgtacacagaagactccccctggacttcaacacgaaaac
actgctccatctgattatttccgcagtctggtggaacagtttgaggtgcagctgcagcaa
tatcgacagcaaattgaagagctagaaaaccacctgacgacacagagcagtggatcccac
atcactcctcaggacttgtctttggccatgcagaagttgtaccagacttttgttgctcag
gctgcacagctccagtcagctcatgaaaacgtcaagatcttgaagcatcagtacctctct
tatcgtcgcgccttcctggaagactccactgacgtcttcgagtccaaacgggcaaccaac
aggaagtggcagagcgcgccacgagtcacgacaggacctgccccattctccagtgtgccc
aacgctgcagcagttgccatggcagccacattgacccagcaacagcagccaactccaggg
acccaggcagccttgggggcagggtttgggaacccttttgcctcgacagttggcagtagc
ttgggctcttctaccgtaggaggttttggtggtgggccagcatttggtggggtggggact
gggggatcttcttttgccttctcctccaccagtaagcccacaggaggcagtctgagtgca
ggctttggtagcgccagcagctcaggcttcaacttcagcaacaatcctggcatcaacccc
tcggccggcctgacctttggggtgtctaaccctcctgctgcgggctttggcacaggaggg
tcttttctgcagctcaagaaaccccctgctggtaacaaaagaggcaagagatag |