Solea solea (common sole): 131462482
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Entry
131462482 CDS
T10853
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131462482
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131462482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
NUDE_C
Motif
Other DBs
NCBI-GeneID:
131462482
NCBI-ProteinID:
XP_058489720
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All DBs
Position
7:complement(28416396..28436338)
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AA seq
677 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYTPRPPSSPYHPRQGSDEWPSSA
EALEPGHAWHDKSPSSSTSPAGQNGHMPFPGGMSSPINSNNTGLGGHMQPSPLKKSMSVI
PSSPQACGSEWISQDDIGGRQNFIPTDHAPLSPQSSVASSGSEQTEDQGSARNTFQEDGS
GMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEHHLESQNVTKGARHKIALSIQKLRER
QSVLKSLEKDILEGGNLRNALQELQQIITTPIKTYSPPSAAQLDAISSCSSSSSDVTKTG
VDKDSVSEGFQSHNPPPCDGDTTATPISEGDIPGQFTRVMGKVCTQLLVSRPDEENISCY
LQLIEKCLAHEAFTETHKKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWTYGSNSLPT
AGSVSVSGSVGRRGQRQFQMTPRGLPAGRINILSPGGIGGVSPRHTLTNPVLAGQGRQSL
WFANPGGSNSMPSQSRSTVQRTHSLPVHTSPQTMLMFQQQECQVPGTDLEINPTLESLCL
SMTEHALGDGMDRTSTI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtcggtatcctcacagattggttcaaaggctggaatgagtgt
gaacagacggtggcgctgttgtccctcctgaagagggtgtcccgcacccaggctcgcttc
ttgcacatctgcctcgagcactggctggcagactgcacagagatccacatccttgaagcc
gaggccaacaatgcagcgattgtcagccagtggcaccaggagccgaaagagaaagtggtt
tccttgctgctctcccacctgcctctgctgcagccgcgcaacagcgaggccaaatgtgag
tacatgaagctgctgcagaaagtgctgagtcacactatagagagcagcctgtttgtggaa
gagagcaggcagctgctgtcctacgctctcatccaccccgccaccacactggacgaccgc
acctctctggccatgtggctgaaccacctggaggagcacctgtccagtggctacacgccg
cggcctccctccagcccgtaccacccacggcagggctcggacgagtggcccagctccgcc
gaggcgctggagcccggacacgcctggcacgacaagtccccgtcatccagcacttctccc
gctggccagaacggacacatgccgttcccgggcgggatgtcgtctcccatcaacagcaat
aacacaggtctgggtggacatatgcagcctagtcctctgaagaagtccatgtcagttatt
ccctccagccctcaggcctgcggctcagagtggatcagtcaggacgacatcgggggacga
cagaacttcatcccgacggaccacgctccgctctcacctcagagcagcgtggcgtcctcg
ggcagcgagcaaacagaagaccagggctcggctcgcaacacctttcaggaggacggcagc
ggcatgaaagatgttcccgcgtggctgaaaagtctccgccttcacaaatatgcatcgctt
ttctcccagatgacctacgaggagatgatgattctcacagagcaccaccttgagtcacag
aacgtcactaaaggagcgaggcacaagatcgcgctgagcatccagaaactgcgagagagg
cagagtgtgctcaagtctttagaaaaggacatcttggaaggcggaaacctccgtaacgcc
cttcaggagctgcagcagatcatcaccacgcccatcaagacctacagcccgcccagcgct
gcacagttagacgccatctcctcctgctcctcttcctcttcagacgtcacgaaaacggga
gtggacaaagattcagtctctgagggcttccagtcccacaacccacccccctgtgatgga
gacacgacagccacgcccatctcagagggcgacatccccggacagttcacccgtgtcatg
ggaaaagtttgcacccagctgctggtctccagaccagatgaggagaatatcagctgttac
cttcaactcattgagaagtgtctggcacatgaggctttcacagagactcataagaaaagg
ttggtctcctggaagcagcaggtgctcaaactgctccgcctcttccctcggaaagctatg
ctggacatgcctgtgtaccgacagaaaggctggacgtatgggtccaactccctccccaca
gcaggttctgtgagtgtgagtgggagtgttggacggcgagggcagcggcagtttcagatg
actcctcgcgggcttccagctggacgcataaatattctgagtcctggtggcattggtgga
gtgtcaccacgacacacactcactaatcctgtgctcgcaggccaggggagacaaagctta
tggtttgctaaccccgggggcagtaacagcatgccgagtcagagtcgcagtactgtgcag
cgaacccactcactccccgtccacacgtccccacaaaccatgctcatgttccagcagcaa
gaatgccaagttccaggtactgacctggagatcaaccccacgctggagtcactgtgcctc
agtatgacggagcatgccttaggggatggaatggaccggacgtccacgatatga
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