Solea solea (common sole): 131462661
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Entry
131462661 CDS
T10853
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04137
Mitophagy - animal
ssoe04140
Autophagy - animal
ssoe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131462661 (hif1al)
04137 Mitophagy - animal
131462661 (hif1al)
04148 Efferocytosis
131462661 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131462661 (hif1al)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
131462661 (hif1al)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
CENP-B_dimeris
MIF4G_like_2
DNA_pol_phi
Sld7_C
Motif
Other DBs
NCBI-GeneID:
131462661
NCBI-ProteinID:
XP_058490042
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All DBs
Position
7:20956357..20972148
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AA seq
681 aa
AA seq
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MEKKDGTVTTKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVSTHLDKAAIM
RVTLSALRMRRLLRSGENKEEEEEEEKEDTEDMEKEEEEEEEDQMDAFYPQALAGFLMVL
TEEGDMIYLTENVNKHIGITQLELLGQSVYDFVHPCDQEELRDMLTPRPGLNKKSAKEHL
TERNFFLRIKSTLTSRGRTVNIKSATWKVLHCSGHMRPFGSSSTLPLAARVMTLLCEPIP
HPSSVEFPLDTCTFLSRHSMDLRFTHCEGRVTELIGYKPDDLIGRSAYEFHHALDSDHVN
KSLHTLLTKGQVSTSHYRFLANSGGFVWAETQATVLYSNKTSQPEAIVCLNFILSAVEQP
DVVFSVEQLRCDRLTKAEPLSPAPPPTPEELETPDSEGGHLTNFSQTEEVGSESSSAAKL
LIKQKEKPEELDLASEDKDAVKPPAGFVELSFISPKTTNSVPEQPQKLCTPQLLQLLTPI
FDPITPPPSASPVPSVDAVPNSSEDKEQMDTSKVEKFFATWQEDGQQQKKNLENMDEMDL
EMLAPYISMDDDFQLSFLSSLPEETNGPSSEPSVVSPAITLNRKRALVTDKDLSFLDKRP
KQGSLSTEEEILLSHKMLGCLEDTDQSDLILDLTPRGRSQLLTDRDPVLGGMQGLCDTAA
LMKEVFIPRPPDLSAPLSPMT
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagacgggacggtaacgaccaaacggagcagttcggagcagcggaagctg
cgttctcgtgatgcagccaggtgtaggcggagtcaagagacggaggtgttttatgagctt
gctcgtactcttccgctcccccgacgggtgtccacgcacctggacaaagctgccatcatg
agagtcaccctcagtgccctacgcatgcggcgcctcttgcgatccggtgagaataaggag
gaggaggaggaggaggagaaggaggatacagaggacatggagaaagaggaggaggaggag
gaggaggatcaaatggatgctttctatcctcaggcgttggcaggtttcctcatggtttta
acagaggaaggagacatgatctacctgacagaaaatgtcaataaacacatcggcatcaca
cagctggagctgctgggtcagagtgtttacgactttgttcatccctgcgatcaagaggag
ctcagagacatgttgaccccacggccagggttgaataagaaatcagcaaaagaacatctg
actgagagaaacttcttcctgcgaataaaaagcaccctgaccagcagggggcgcacagtc
aacatcaagtctgctacctggaaggttctccactgcagtggtcacatgcgtccttttggc
agtagctccactctgccccttgctgccagagtaatgactttgttgtgtgagcccatccct
cacccatccagtgttgagttccctctggatacatgtactttcctgagccgccacagtatg
gacctgcggttcacacactgcgagggcagggtaacagagttgataggatacaaaccagat
gatctgattggtcgctcagcctatgagttccaccatgcactcgactctgatcacgtcaac
aaaagtctgcacacattgctgaccaaaggtcaggtgagcaccagccactatcgctttctg
gcgaacagcggtggctttgtgtgggcagagactcaggcgactgtcctctacagcaacaag
acgtcgcagcccgaggccattgtctgcctaaacttcatcctcagtgctgtggagcagcca
gatgttgttttctcagtcgagcagctccgttgtgaccgcctcacgaaagctgaacccctg
tcaccggcgcctccacctacaccagaggaactggagacccctgactcggaaggggggcat
ctcactaacttcagtcagaccgaggaggtgggttcagaatccagcagtgctgcaaagctc
ctcatcaaacagaaggagaaaccagaggagcttgacttggcttctgaggataaagatgca
gtcaaaccaccagcaggctttgttgagctgtcattcatcagtccaaagactacgaactcg
gtgccggaacaacctcagaaactatgcactccacagctgctacagctcctcacacccatc
tttgaccccatcacaccaccaccatctgcatcaccagtcccctcagtggatgctgtccct
aactccagtgaggacaaggagcagatggacacaagtaaagtggagaagttcttcgccact
tggcaagaagatgggcaacagcaaaaaaaaaacctggagaacatggatgagatggatctg
gaaatgttggctccttacatctctatggacgacgatttccagctttccttcctcagcagt
ttacctgaggaaaccaatggcccttcttcagaaccttcagttgtgtctcctgctatcaca
ctgaacaggaaacgggctcttgtcacagacaaggacctgtcgtttctggacaagaggccc
aaacaaggttctttgtcaacagaagaggaaattcttctcagccacaaaatgttgggctgt
ctggaggataccgaccaatcagatttgatcttagacctcaccccaagagggcggagccaa
ctgctcacagacagagaccctgttttaggagggatgcagggactgtgtgatactgcagct
ctgatgaaggaagtattcataccacgcccacctgacctgtctgcacctctctcccccatg
acttga
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