Solea solea (common sole): 131463020
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Entry
131463020 CDS
T10853
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04142
Lysosome
ssoe04144
Endocytosis
ssoe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131463020
04142 Lysosome
131463020
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131463020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131463020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssoe04147
]
131463020
Membrane trafficking [BR:
ssoe04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
131463020
Exosome [BR:
ssoe04147
]
Exosomal proteins
Proteins found in most exosomes
131463020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
131463020
NCBI-ProteinID:
XP_058490631
LinkDB
All DBs
Position
7:10456687..10480124
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDLADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRIWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPSDAWKEGQFKDIVTKVANVELYYKAIHFYLEIKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQATDSQPIVYGTPQLMLTAGPNVPVPPQQAYGYGYTAAAPGFTQPPQPN
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgccaatccgcttccaggagcacctgcagctccagaacctgggaatc
aacccagccaacattggattcagtactctgaccatggagtccgacaagttcatctgtgta
cgagagaaagtgggcgagcaggcccaggttgtcatcatagatttggccgatcccaacaat
cccatccgcaggcccatctctgcagacagcgccatcatgaaccctgccagcaaagttatt
gcccttaaagccgcaaagaccctgcagatcttcaacattgagatgaagagcaagatgaag
gctcacacaatgactgatgacgtgaccttttggaaatggatctccctgaacactgttgcc
ctggtcacagacaacgcagtctaccactggagtatggagggtgactctcagccaatcaaa
gtctttgaccgtcactctagcctggcaggctgccagattattaactatcgcactgacgcc
aaacagaagtggctgctgctcattggcatttcagcacagcaaaatcgtgttgtcggagcc
atgcaactgtactcggtggacaggaaggtgtctcagccgatcgaggggcatgctgctggg
tttgcacagtttaagatggagggcaacactgaagagtccactctgttctgctttgctgtg
cgaggacaggcaggaggaaaactgcacatcattgaagtggggaccccaccaactgggaac
cagccatttccaaagaaagctgttgatgttttctttcctccagaagcccagaatgacttc
cctgtggccatgcagatcagctcaaagcaagatgtagtattcctcatcaccaaatatggc
tacatccacctctatgacctggagactggaacttgtatctacatgaacaggatcagtggg
gagaccatttttgtcacagccccccatgagccgactgctggtatcattggagtcaacagg
aaaggacaggtgttgtcagtgtgcgtggaggaggaaaacatcattccctacattactaac
gtgctccagaacccagacctggctcttcgcatggccgttcgcaacaaccttgctggtgct
gaggagctgttcgcccgcaagttcaacaccctctttgcagcaggaaattactcggaggct
gccaaggtggcagctaatgcacccaagggtatcctgcggactccagacaccatacgtcgt
ttccagagtgtaccagctcaaccaggccagacgtctcctctgctccagtactttggcatc
ttgctggaccaaggccagcttaataagtttgagtctttggagctgtgcaggccagtcctc
cagcagggccgcaagcagctactagagaagtggctgaaagaggacaagcttgagtgctct
gaggagcttggagacttggtgaagtctgttgatcctacactcgctctcagtgtctacctc
agagccaacgttcccaataaggttattcagtgctttgcagagactggtcagttccagaag
attgtactctatgccaagaaggtgggctacacaccagactggatctttctgctgaggaat
gtaatgcggatcagtccagagcagggccttcaattctcacagatgttggttcaggatgaa
gagccacttgctgacattacacagatagtcgatgtgttcatggagtacaacctgatccag
cagtgcacatccttcctactagatgccctgaaaaacaatagacccatggaaggaccactg
cagacacgcctgctggaaatgaatctggtccatgcaccacaggttgcagatgccatcctg
ggcaatcagatgttcacccactatgatcgggcacatgtggcacagctgtgtgagaaagct
ggtctcctgcagagggcgctggagcactacactgacctgtatgacataaagcgtgcagtg
gtgcatacacacctgctgaacccagagtggctggtgaatttctttggctccttgtcagtg
gaggattctctggaatgtctgagggctatgctgtctgcaaacatccgccagaaccttcag
atctgtgtgcaagtggcctccaagtaccatgagcagctcagtactcagtccctcactgaa
ctttttgagtctttcaagagctttgagggtttgttctacttcttgggttccatcgtgaac
ttcagccaggatccagaggtccactttaaatacatccaggccgcctgcaagacgggccag
atcaaagaggtggagagaatctgcagagagagtaactgctatgaccctgaacgcgtcaag
aacttcctcaaggaagccaagctgaccgaccaactacctttgatcatcgtgtgtgaccgc
tttgattttgtccatgacctggtcctgtacctgtaccgcaacagcctgcagaaatacatt
gagatctacgtgcagaaggtgaacccaagccgtctgcccgtcgtcattggtgggctcctg
gatgtagactgcgctgaggatgtgattaagaacctgatcatggtggtgagaggacagttc
tccactgatgaactggttgctgaggttgagaaaaggaaccgactgaagctgctgctgcct
tggttggaggctcgtattcatgaaggctgtgaggagcctgctacccacaatgctctggcg
aagatctatatcgacagcaacaacaaccctgagcgcttcctgagggaaaatcccttctat
gacagccgtgtggtggggaagtactgtgagaagagagacccccacttggcctgtgtggcc
tatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgagaactcacttttt
aagagtctatcccgctaccttgtacgtcgtaagaaccccgagttgtgggcgagtgtgctg
ctggagaccaataactacagaagaccactcattgatcaggttgttcagacagctctgtca
gagacccaggatccagaggaggtgtcggtcacagtcaaggccttcatgaccgctgacctt
cccaatgagctcatcgagcttctagagaagattgtcctggataactccgtcttcagtgag
cacagaaacctgcagaatttgctcatcctgacagccattaaagctgatcggacacgtgtc
atggagtacatcaaccgtctggacaactatgatgccccagacattgcaaacattgccatt
agcaatgagctttttgaggaggcctttgctatttttagaaaatttgatgtcaacacctct
gctgttcaggttctgattgagcacattggtaacttggaccgagcttatgaatttgctgag
cgctgcaatgagccaccggtgtggagtcagctggcaaaggcgcagctccagaagggtctt
gtcaaagaagccattgactcttacatcaaggctgacgacccctctgcttatatggaagtg
ggacaagctgcagcccaaagtggaaactgggaggacctggtgaagtttctgcagatggcc
cgtaagaaggctcgggagtcatatgttgaaacagagctgatctttgccctggctaagacc
aaccgcctggctgagctggaggagttcatcaacggacccaataatgctcacattcagcaa
gtgggtgaccggtgctatgacgagaagatgtacgatgcagccaaactgctttacaacaat
gtgtccaactttggccgtctggcctctactctggtccacctgggagaatatcaggcagct
gttgatggagcccgcaaggccaacagcacccgcatctggaaggaggtgtgttttgcgtgt
gtagatgggaaggagttccgtcttgcccaaatgtgtggcctacatattgtcgtccatgct
gatgaactggaagaactcatcaactactaccaggaccgtggttactttgaagagctgatc
accatgctggaggctgctctcgggcttgagcgggcgcacatgggtatgttcaccgaactg
gccattctctactctaagtttaagccccagaagatgagggagcatctggagcttttctgg
tcccgtgtcaacattccaaaggttctcagggcagcagagcaggcccacctgtgggcagag
ctggtgttcctctacgacaagtacgaggagtatgacaatgccatcatcacgatgatgaac
cacccatctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggccaac
gtggagctgtactacaaagccatccacttttatctggaaataaaaccactattactgaat
gacctgctcattgtcctctctccgagactggaccacacacgcgctgtcaacttcttcagc
aaggtgaaacagctgcctctggtgaaaccttatctcaggtctgtccagaatcacaacaac
aagtcggtgaatgaggcactgaacaacctcttcattattgaggaagactatgcggcgctg
cgcacatccatcgatgcgtatgacaacttcgacaacatctctctggctcagggcctggag
aagcacgagctaatcgagtttaggaggattgcggcctacctgttcaagggcaacaaccgc
tggaaacagagtgttgaactctgcaagaaggacaagctctataaggatgctatgcagtat
gcatcagagtccaaagacacagagcttgcagaagagctcctggcttggttcctgaacgaa
gacaagaaagagtgtttcgccgcctgtttattcacctgctacgacctgctgcggcccgat
gtggtgctggagacggcctggcgacacaacatcatggacttctccatgccatacttcatc
caggtcatgagagaatatctgagtaaggttgatgcgataaaggaaaaggtggacaaactt
gaagcctccgagtccctgaggaaacaggaggagcaagccacagactctcaacctattgtt
tacggcacaccgcagctcatgctcacagcagggcccaatgtgcctgtgcccccccagcag
gcctatggttacggctacacagcagcagcaccgggcttcacccaaccgccacagcccaac
tttggttatggcatgtga
DBGET
integrated database retrieval system
