KEGG   Solea solea (common sole): 131463036
Entry
131463036         CDS       T10853                                 
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
ssoe  Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssoe04131]
    131463036 (copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssoe04147]
    131463036 (copa)
Membrane trafficking [BR:ssoe04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    131463036 (copa)
Exosome [BR:ssoe04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   131463036 (copa)
  Exosomal proteins of bladder cancer cells
   131463036 (copa)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 131463036
NCBI-ProteinID: XP_058490667
LinkDB
Position
1:complement(3963514..3976769)
AA seq 1221 aa
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGISGVDLFGASDAIVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCNRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKIQVPNCEEIFYAGTGSLLLRDSDGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKWESLCSIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EVETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADQDMDAP
GGEGWGEDAELQLDEDGFMDAQEGFGDDGMGKEEGGGWEVEEDLDLPPELDIPAAGGAGE
DGFFVPPTKGMSPTQMWCNNSQLPADHILAGSFETAMRLLHDQVGVVNFGPYKSLFMQTF
SRGRTCYLGLPSLPCLRSQPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTSGRFE
EAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLEQQKR
LCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTRK
ILAACEKNLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPPYKGQTCRV
TQVTEVGKDVIGLRVSALQFR
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgttaactaaatttgaaacgaagtcggcccgtgtcaaaggtctaagtttccatcccaaa
agaccatgggttcttgcaagtttgcacaacggtgtcatccagctgtgggattatcggatg
tgcaccctgatcgacaagttcgatgagcatgacggtcccgtcagaggaatcgatttccac
aaacagcagcctctgtttgtgtctggaggtgatgattacaaaattaaggtgtggaactac
aagctgaggcgctgcctcttcactctccttggacaccttgactacatccgaaccaccttc
ttccaccatgagtacccctggattttgagtgcctcggatgaccagaccatacgcatctgg
aactggcagtctaggacctgcgtctgtgtcttgaccggccataatcactacgtgatgtgc
gcccagttccatccatctgaggacctggtggtgtcagccagtctggaccagactgtacga
gtgtgggatatctctggtctgaggaagaagaatttgtctcctggtgctgtagagactgac
gtgcgtggcatcagtggtgttgacttatttggtgcctccgatgccatcgtcaagcatgtt
cttgagggccacgaccgtggagtcaactgggctgctttccaccccactatgcctctcatc
gtgtctggagctgacgacaggcaggttaaaatctggagaatgaatgaatccaaggcctgg
gagctagatacctgccgtggtcactacaacaacgtgtcatgtgccgtcttccacccacgt
caggaactcatcctgtccaactctgaggacaagagtattcgggtgtgggacatgtccaag
agaactggagtgcagactttccgtcgagatcatgatcgtttctgggttctgggcgctcat
ccaaacctcaacctgtttgctgcaggtcacgacagcggcatgatcgtgttcaagctggag
cgtgagcgtccggcgtacgctgtgcatgggaacatgttatactacgttaaggatcgcttc
ctccgccagctggattttaacagcagcaaagacactgctgtcatgcagctacgcagtggc
tccaagttcccagtgttcagcatgtcatacaatcctgctgagaacgccgtcctgctctgc
aatagggcaaccaacctggagaatagcacttacgacctgtactctattcctaaagaaagt
gactctcagaaccctgatgcacctgaggggaagaggtcctctggactgacggcagtctgg
gtggccaggaacagatttgctgtcctggaccgaatgcactctctgctgatcaagaacctg
aaaaatgaaatagtgaagaaaatccaggttccaaactgcgaggaaatcttctacgcaggg
acaggctcactgctgctgcgtgattctgacggtgtcacactgttcgatgtgcagcagaaa
cgctccctggccactgtcaagatcgccaaggtcaagtatgtggtgtggagtgcagacacg
agccacgtggccctgctggctaaacatgccatcatgatctgcaaccgtaagtgggagagt
ctctgcagtattcatgaaaacatccgagtgaagagtggagcctgggacgagagtggagtc
ttcatctacaccacctccaaccacatcaaatatgccctcacctctggggatcacggcatc
atcagaacactggacctgcccatttacgtgacccgtgtgagaggaaacagtgtttactgc
ctggacagagagtgcaggccacgtgtcctcaccatcgacccaacagagtatcgcttcaaa
ctcgcccttgtcaaccgtaaatacgatgaggtgcttcacatggtgcgtaatgccaagctg
gtgggtcagtccatcattgcctacctgcagaagaagggttaccctgaggtggcgctgcac
tttgtcaaagatgagaagactcgctttagtttggcgctggagtgtggcaacattgaggtg
gcgctggaggcagcgaaggccctggatgagcgcagctgctgggagcgcctgggtgaggct
gcactgctgcagggccaccaccaggtcgtggaaatgtgttatcagaggaccaagaacttt
gacaagctcaccttcctttacctcatcactggcaatctggccaagctgcgcaagatgatg
aagattgctgagatcaggaaggacatgagcggtcactaccaggcagcgctctacctggga
gacgtcagtgagagggtccgcattttgaagaactgtggacagaagtctctggcgtacctg
accgcagccacccatgggcttgatgaagaggctgaatcacttaaggagacgtttgaccca
gaagtggagacggttcctgaggttgatccaaatgcacagctgctacagccccctccaccc
atcaaccccctggacaccaactggcctctgctcactgtatcaaagggcttctttgaagga
gccattgcagcaaaagggaaggcaggacaaatggctgctgatcaggacatggatgctcca
ggaggtgaaggctggggagaagatgctgaactccagctggatgaagatggtttcatggat
gcccaggaaggatttggggatgatgggatggggaaagaggagggaggaggctgggaagtg
gaagaagatctggaccttcctccagagctggacataccagctgcaggtggagcaggagaa
gacggtttctttgtcccaccaaccaagggaatgagtccaacccagatgtggtgcaacaac
tcccagctgccagcggaccacatcctggctggctccttcgaaactgccatgagactgctg
cacgaccaagtcggagttgtgaactttggcccatacaagtcactgttcatgcagacgttt
tcgagagggcgcacctgttacctggggctgccgtccctaccctgcctgcgcagccagccc
cagaggaactggaaggactgtggagcaaagcagggcctgcctgctgtgggtttgcgcctc
tccgacctcatctctcgtctacagcagtgctaccagctgaccacttctggccgctttgag
gaagctgttgagcgcttcagagccatcctgctctctgtgcctctgctggtggttgataac
aagcaggaaattgcagaggctcagcagctgatcaccatttgcagagagtacatcgtgggt
ctgaccatggagacagagaggaagaagctgccaaaagacactttggagcagcagaagagg
ctttgtgagatggctgcttatttcacccattgtaatctccagcccgtccacatggtgctg
gtgttgcgcacagctctcaacctcttcttcaaactgcgtaactttaagaccgctgccggc
tttgcacgacgcctgctggagctgggaccaaagccagatgttgcacagcagactcgcaag
attttggctgcctgcgagaagaatctgacggatgcgcaccagttgaactacgaccctcac
aatccatttgacctgtgcgctgcctcttttgttccactgtaccgtggacgccctgttgag
aagtgccctctgtctggagcctgctactgtcctccatacaaaggccagacctgcagggtc
acacaggtgacagaggttggcaaggatgtgattggtctgcgtgtgagtgcacttcagttc
cgttga

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