Solea solea (common sole): 131463086
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Entry
131463086 CDS
T10853
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131463086 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131463086 (dhx36)
03012 Translation factors [BR:
ssoe03012
]
131463086 (dhx36)
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131463086 (dhx36)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131463086 (dhx36)
Translation factors [BR:
ssoe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131463086 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
HerA_C
DnaB_2
Motif
Other DBs
NCBI-GeneID:
131463086
NCBI-ProteinID:
XP_058490743
LinkDB
All DBs
Position
7:29849171..29861168
Genome browser
AA seq
1048 aa
AA seq
DB search
MSYSHRGGRRGGRGGRGHRDGSRERWDRGGGGGGERGGGGGGGGGGGEHRDRDRPPPHLK
GREIGLWYARYGAVRRKQADRRSRAVVQMDEDREQHITQLLHSVQREQPLAHRDAAVCPS
DSWTTEDDSHCYFDGDLPEEQKLKLDIKSEEEEELSLDHKKSSSKSHGHSSTSVDKDGPP
DRWDEDDHQEEKEDRRTLRSKDKDVEFLFQEVVRDTSLDNDLMRDFMSKRSDPKYREMLK
FREKLPSYGKKEELVELIRSNRVLVVSGETGCGKTTQVTQFILDDYINRGVGSLCRVVCT
QPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSD
PLLSSISHLVLDEIHERNLQSDVLLIIVKDLLKLRDDLKIILMSATLNAEKFSKYFDNCP
MIHIPGSTFPVDEFLLEDIVEMTRYRPQNQDRRPAWKRGFWQGQNSRPEKEEKEAEYKDK
WPLYERALQGRYSDNTISTLQMLDNNDKIDLELILALIRYIVLQEQEGAILVFLPGWDNI
SSLNDLLMAQQMFKSDRFIIIPLHSLMPTVNQTQVFKRPPPGVTKIVIATNIAETSITID
DVVYVIDGGKIKETNFDTNNNISTMTAEWVSVANAKQRKGRAGRVRPGKCYHLYNGLRAE
LLDDYQLPEIMRTPLEELCLQIKILKLGSIARFLEKAPDPPTENAINLAIKNLMDLNALD
RSENLTALGVHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMA
DMRRKTLSRNSKSDHLTIVNAFQGWEETKQRGVRYEREYCWDNFLSANTLQMLHNMKAQF
AEHLMHVGFVSSKNPKDPKSNINSDNEKLIKAVIVAGLYPKVAMIRPSHSRKRPGVKVYT
QADGKVCIHPKSVNAEETDFNYTWLIYHLKMKTSSIFLYDCTEVSPFSLLFFGGDISIQR
DEDQDTIAVDKWIVFRSPARIAHLVKSLKKELDSLLEEKIRNPSPVDWNNRQSKDCAVIT
AIIDLITTQEKSTSAPRGQHVHFPDDND
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagttacagtcacagaggaggaagaagaggaggacgaggaggacgaggacacagagat
gggagcagagaacggtgggaccgaggaggaggaggaggaggagaacgagggggaggagga
ggaggaggaggaggaggaggagaacaccgggaccgggaccggcctcctcctcacctaaag
ggccgtgagatcggactgtggtacgccaggtacggagcagtgaggaggaaacaggcggac
aggagatcgcgagccgtggtccagatggacgaggacagagagcagcacatcactcagctg
cttcacagtgttcagagagagcagccgttagcacacagagacgctgctgtgtgtccgtct
gacagctggaccacagaggacgacagtcactgttactttgatggggatttgcctgaagag
cagaaactgaagcttgacattaaatctgaagaggaggaagaacttagtctggaccacaag
aaatcctcttcaaaatcacacggacactcaagtacatcagtcgataaagatggacctcca
gacaggtgggatgaagatgatcatcaggaggagaaggaggaccgacggacactgagaagc
aaagacaaagatgtggagttcttgtttcaggaagtagtcagagacacttccctggacaac
gacttgatgagagacttcatgagcaagagatcagatccaaagtacagagaaatgctgaaa
ttcagggaaaaattaccatcttacgggaaaaaagaggagctggtggagctgatccgcagt
aaccgtgtgttggtggtgagtggagagactggctgtggtaaaacgactcaggtcacacag
ttcatcctggacgactacatcaacagaggcgtgggctcgctgtgccgggtcgtgtgcacg
cagcctcgtcgcatcagtgccatctctgtagcagagcgtgtagcagcagagagagcagaa
agtgttggcaatggaaactcttgtggttaccagatccgcctacagagccggttaccacgg
aaacaaggttcagtcttgtactgcacaacgggtattattcttcagtggcttcgctcagac
ccactcttgtccagtattagtcacttggtgttggatgagattcacgagaggaacctgcag
tccgacgtgttgctcatcatcgtgaaggatctgctgaagctccgtgatgatctcaagatc
atcctcatgagtgccacgctcaatgcagagaagttttccaaatactttgacaactgtcca
atgatccacatccccggctcaactttcccagtggacgagttcctacttgaggacattgta
gagatgactagatatcgtcctcagaaccaggaccgtcgaccggcatggaagagaggcttc
tggcagggacagaactccagaccagagaaagaagagaaagaggccgagtacaaagacaag
tggcctctgtatgagcgcgctctgcagggaaggtattctgacaacacgatttcgacactg
cagatgttggacaataatgacaagattgacctggagctgatcctggcactgatccgttac
attgtgcttcaggagcaggaaggagccatcctggtgtttctccctggttgggacaacatc
agcagcctcaatgaccttctcatggctcagcagatgtttaaatcagatcgcttcattatc
atccctttacactctctaatgccgactgttaaccagacgcaggtgtttaaacggcctcct
cctggagttacaaagattgtgattgctactaatatagcggagaccagcatcaccatcgat
gacgttgtgtatgtaatagatggaggaaagattaaagagaccaactttgacactaacaac
aacatcagtaccatgaccgctgagtgggtcagtgtggccaacgccaagcagaggaaagga
cgtgctggccgagtgcgtccagggaagtgctatcatctgtacaatggcctcagggcagag
ctgttggacgactatcaactacctgaaatcatgaggacgccactggaggagctgtgcctg
cagatcaagattctgaagcttgggtccatagctcgattcctggagaaagctccggaccct
ccgactgaaaacgccattaacctcgccatcaagaacctcatggacctgaacgctctggac
cggtcagagaacctgacggctctgggtgtccacctggctcgtcttcctgtggagcctcac
attggcaaactgattctgtttggagctttgttgggctgcctcgaccctgttctcaccatc
gctgcgtcactcagcttcaaagaccctttcttcattccactgggtaaagagaagatggcc
gacatgaggaggaagactctgtccagaaactcaaagagtgaccacctcaccattgtcaat
gccttccagggctgggaagaaaccaaacagcgtggtgtcagatatgagagagaatactgc
tgggataacttcctgtctgccaatactctgcagatgctgcacaacatgaaggctcagttt
gctgaacatctaatgcatgtaggctttgtcagcagcaagaaccccaaagaccccaaatct
aacatcaactcagacaatgagaagttaatcaaagcagtgattgtagcaggtctgtatcca
aaggtggccatgatcagaccgtctcacagcagaaagaggccgggagttaaagtttacacc
caggctgatggaaaagtctgtatccacccgaaatctgtcaacgctgaagagacggacttc
aactatacgtggctcatttaccacctgaagatgaaaactagcagtatcttcctctatgac
tgcactgaagtgtccccgttctcgctgctgttctttggaggagacatcagcatccagaga
gatgaggaccaggacaccatagcagtggacaagtggattgtcttcagatccccagcacgc
atcgctcaccttgtgaagagcttaaagaaagagttggattctctgttggaggagaaaatc
cgtaatccttcgcctgtcgactggaataaccgtcagtccaaagactgtgccgtcatcaca
gccatcatagacctcatcaccacccaggagaagagcacttctgccccgagagggcaacac
gttcacttccctgatgacaatgactag
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