Solea solea (common sole): 131463637
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Entry
131463637 CDS
T10853
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04510
Focal adhesion
ssoe04512
ECM-receptor interaction
ssoe04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131463637 (tncb)
04518 Integrin signaling
131463637 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131463637 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssoe00536
]
131463637 (tncb)
Glycosaminoglycan binding proteins [BR:
ssoe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131463637 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
DUF7949
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Fn3_Dep-1_3rd
EGF
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_PEAR1L
FN3_Tor_3rd
Actin
EGF_TGFA-like
SPE9_EGF_3rd
EGF_integrin
hEGF
Motif
Other DBs
NCBI-GeneID:
131463637
NCBI-ProteinID:
XP_058491456
LinkDB
All DBs
Position
8:28834482..28890130
Genome browser
AA seq
1788 aa
AA seq
DB search
MWTKGFLLGFATVVLVFQLSTAGLVKVLRHRREALMPKKTQENLTLPHPDQPVVFNHVYN
INVPSTSLCSVDLDSPGATEVKPRTHAPMNVQNEEHIEHTVDGDNQIVFTHRINIPKQTC
NCNNQVPDMKDILNRLEMLEAELSSLREQCSSGTGCCGAQVTGEVVTKPYCNGRGNWSSE
TCTCTCEPGWKGPNCTEPECPNDCQDQGRCLDGKCECFEGFGGDDCAVELCLLDCGDYGH
CVEGSCLCEEGFLGIDCSQTNCLNNCLGRGRCIEDECVCDEPWTGFDCSELICPNDCYDR
GRCINGTCYCDEGFTGEDCGNLTCPGDCNSRGMCVNGLCMCQTGYSGEDCSKLTCPSDCN
EKGHCFNGKCICDPGFEGEDCSILSCPDNCSNRGQCINGECVCDIGYQGEDCSEISCPNN
CHDRGRCVDGLCICDKGFAGEDCSVKTCPKDCLGRGECIDGKCACFAGFAGKDCSELTCP
NDCLDRGHCVNGQCVCHKGFTGEDCSELTCPNDCQDNGRCVNGQCVCHKGFTGEDCSEKT
CPNNCKDNGRCVNGQCVCHKGFTGEDCSEKTCPNNCKDNGRCVNGQCVCHKGFTGEDCSE
KTCPNNCKDNGRCVNGQCVCHKGFTGEDCSEKTCPNNCQDNGHCVNGQCVCHKGFTGEDC
SEKTCPNNCQDNGDCVNGQCVCHKGFTGEDCSEKTCPNNCLDRGFCVDGNCVCYEGFTGT
DCSVLTCPGDCQNQGRCENGLCICDEGFIGEDCSEVSPPKDLKVVEVTPETVDLSWENEM
RVTEYLITYVPTAPGGLELDMRVPGDQKMATIRELEPGIEYLVNVFAILSNKRSVPVSAR
VATHLPEPEGLKFKSVRESSVEVQWDPLNIPFDGWNLIFRNTKEEEGEILNALGRPETTF
EQSGLGPGQEYEVKLEVVKNKKRGPPASKNIVTRIDAPSRVDVRDVTDTTALVTWFQPVA
HVEGVSVSYGPSSDPSDRSVVELSNTDTQYHLGGLAPDTHYEVSLTARLGDRSSIPVYES
FLTDLDAPRDLQTVELTDETITLEWTNSHAQVDNYRIKYGTLSGGEHGELLFTAGPKETT
QAKITGLRPGTEYGMGVTAVKDERESLPTTTNAVTALDAPKDLTVTEVSETTITLEWKRP
LAKMDAYRLVHVSADGHRREDTIPVGTETHVLKGLTPGMLYTISVTAERGRRTSVPTTVS
APTDEEKPVVSDVTVSDVSWDSFLLSWSAEDRAFDAFLVEVTDAETGAEWQNHTAPGDAR
SFAVTGLSPSTWYRANLYGVYRGVLLDPVFADTITDLGAPKGIRFSEVTDTSATVHWALP
RARVDNYRVTYVPAHGGYAKTVTVDSSESHTVLPNLTPGVTYQVTVIAVKGQRESEPGSD
SVTTALDKPRGLTAVNITDTVALLLWQPAFATVDGYVLTYSADSVAPVMERVSGNVVEFE
MSSLTPATHYTVKIYAVRDLAKSAATTTEFTTDVDAPQDLTATNIQTESCLLTWKPPRAD
ITGYILSFESADGSFREVVLSPTAVSYNMAQLSASTEYSVRLQAIAGPKRSRIITTVLTT
TGVLYRHPRDCSQALLNGDTSSGLYTIYVGGDENQPVQVYCDMGTDGGGWIVFLRRQSGK
LEFFRNWKNYTGGFGDMNDEFWLGLSNLHKITAGGQYELRVDLRDKGEAAYAQYDKFSVS
EPRTRYKVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDIAVTNCALSYKGAFWYKNCHRVN
LMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPSNFRNLEGRRKRS
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaaaggctttcttctgggcttcgccaccgtggtcctagtgttccagctctcc
acggccggcctggtgaaggtcctccgccaccgcagagaggctctgatgcccaagaaaacc
caggagaacctcaccctgccccaccccgaccagccggtggtgttcaaccatgtctacaac
atcaatgtcccctccacgtccctctgctccgtggacctggactcaccgggagccacagag
gtcaaaccaagaacccatgccccgatgaacgtgcagaacgaggagcacattgagcacacg
gtcgacggagacaatcagatcgttttcacccaccgcatcaacatccccaagcagacgtgc
aactgcaacaaccaggtgccggacatgaaggacatcctgaacaggctggagatgctggag
gccgagctgtccagtctgagggagcagtgcagcagcggcacaggatgctgtggagctcag
gttacaggcgaagtcgtcacaaagccgtactgcaacggtcgtgggaactggagcagtgaa
acctgcacctgtacatgtgaacccgggtggaaaggccccaactgcaccgaacccgagtgt
cccaacgattgccaggaccagggtcgctgcttggatggcaaatgcgaatgctttgagggc
ttcggcggcgacgactgtgctgtggaactctgtttgctcgactgtggcgactacggccac
tgcgtcgagggctcctgcctctgtgaggaaggcttcctcggtattgactgctcccagacc
aactgcctcaacaactgtctcggccgcggacgctgcatagaggatgagtgtgtctgcgac
gagccgtggacgggctttgactgctccgaactcatctgccccaatgactgctacgaccgg
ggacgctgcatcaacggcacctgctactgtgacgaaggcttcaccggggaagactgcggc
aatctcacgtgtcccggtgactgcaacagtcgtggcatgtgcgtgaatggcctgtgcatg
tgccagactggctacagcggagaggactgctcaaagctcacgtgtccgtcagactgcaat
gagaaaggccactgcttcaacgggaagtgcatctgtgatccagggttcgagggcgaagac
tgctccatcctttcatgccctgacaactgcagcaacagggggcagtgcattaatggagaa
tgtgtctgcgacattgggtaccaaggcgaagactgtagcgagatctcctgccctaacaac
tgccacgaccgcggccgctgtgtcgacggactgtgcatatgcgacaagggattcgctgga
gaggactgcagcgtcaaaacctgtcctaaagattgcctgggacgcggtgaatgcattgac
ggcaagtgcgcatgctttgctggtttcgcgggtaaagactgcagcgagctgacctgtccc
aacgactgtctggaccgcggccactgcgtgaatggacaatgtgtttgtcacaaaggcttc
accggtgaggactgcagcgagctgacctgtcctaacgactgccaggacaatggccgctgc
gtgaatggacaatgtgtttgtcataaaggcttcacgggcgaggactgcagcgagaagacg
tgtcccaacaactgtaaggacaatggccgctgcgtgaacggacaatgtgtttgtcataaa
ggattcaccggcgaggactgcagcgagaagacgtgtcccaacaactgtaaggacaatggc
cgctgcgtgaacggacaatgtgtttgtcataaaggcttcaccggcgaggactgcagtgag
aagacgtgtcccaacaactgtaaggacaatggccgctgtgtgaatggacaatgtgtttgt
cataaaggcttcaccggcgaggactgcagcgagaagacgtgtcccaacaactgtcaggac
aacggccactgcgtgaatggacaatgcgtttgtcataaaggcttcactggggaggactgc
agcgagaagacgtgtcctaacaactgtcaggacaacggcgactgcgtgaacggacaatgt
gtttgtcataaaggcttcactggggaggactgcagtgagaagacgtgtcccaacaactgt
ctcgacagaggtttctgtgtcgatggcaactgtgtgtgctacgagggtttcacaggaacg
gactgctccgtgctgacctgcccgggcgactgccagaaccagggacgctgtgagaacgga
ctgtgtatctgtgacgagggcttcatcggagaggactgttctgaagtctcaccgcccaag
gacctgaaggtggtggaggtcacccccgagaccgtggacctgtcctgggagaatgagatg
cgtgtgactgagtacctgatcacctacgtccccacggcaccagggggcctggagctggac
atgcgggtccccggagaccagaagatggccacaatccgggagctggaacctggcatcgag
tacctggtcaacgtctttgcgattctcagcaacaagaggagcgttcctgtcagtgcccga
gtggcgacgcatctgcctgagcctgaaggactcaagttcaagtcagtgagggagtcgtcc
gtggaggtgcagtgggatccactgaacattccctttgacggctggaacctcatcttcagg
aacacgaaagaggaggaaggtgagattctgaacgcgctcggtcgtccagagaccaccttt
gagcagtcgggcctgggacccggccaggagtacgaggtcaagctggaggtggtgaagaac
aagaagcgtgggccgccggcatccaagaacatcgtcacaagaatcgacgctcccagccgc
gtggacgtacgcgacgtgacggacaccaccgccctggtgacctggttccagcccgtggct
cacgtggaaggcgtgagcgtctcgtacggaccgagctcggatcccagcgaccgcagcgtg
gtggagctgagcaacaccgacacccagtatcacctgggaggcctcgctcccgacacccac
tacgaggtttccctgacggcgcggctgggagacagaagcagcattcccgtgtacgagtcc
ttcctcacagacctggacgcacccagagacctgcagacggtggagctgaccgacgagacc
atcaccctggagtggaccaacagtcacgcgcaggtggacaactaccgcatcaagtacgga
acgctgtccggaggcgaacacggagaactgctcttcactgcgggaccgaaggaaaccacg
caggccaagatcaccggcctgagacccggcacagagtacgggatgggagtcacggcggtg
aaagatgagcgcgagagtctgcccacgacgaccaacgccgtgaccgctctggacgctccc
aaagacctgacggtgaccgaagtgtcagaaaccaccatcacgctggagtggaagcgtcct
ctggccaaaatggacgcctacagactggtgcacgtctccgcggacggccacaggcgcgag
gacacgatcccggtcggcacggagactcacgtcctgaagggcctgacgcccggcatgttg
tacaccatcagcgtcacggcggagagaggacgcaggaccagtgtccccacgactgtctca
gcaccaacagacgaggagaagcctgtggtgagcgacgttacggtgagcgacgtgtcgtgg
gacagcttcctcttgtcctggtcggccgaggacagggcgtttgacgccttcctcgtcgag
gtgaccgacgcggagacgggcgccgagtggcagaaccacacggcgcccggcgacgctcgc
agcttcgccgtcaccggcctctcgccctccacctggtacagggccaacctgtacggggtt
tacaggggcgtcctgttagacccggtctttgcagacaccatcacagatctgggagctccc
aaaggaatccgcttctctgaagtcaccgacacgtccgccaccgttcactgggcgctaccg
agagctcgcgtggacaactacagggtcacgtatgtccctgcacacggaggttacgctaag
actgtgactgtggacagttcagagtctcacactgtgctgcccaacctgacccccggggtc
acctatcaggtcaccgtcatcgcggtcaaaggtcaacgggagagtgagccggggtcagac
agtgtcaccacagccctggacaagcctcgcggtctgaccgcggtcaacatcacagacacc
gtggcgctgctgctgtggcagcccgccttcgccaccgtggacggttacgtcctcacgtac
agcgcagactcagtggctccggtgatggagcgcgtgtcagggaacgtggtggagtttgag
atgagctctctgacgccggcgacgcactacactgtgaagatttacgcggtgagagacttg
gccaagagcgcagccacgacgaccgagttcaccaccgacgtggacgcccctcaggatctg
actgccactaacatccagacagaaagctgcttgttgacatggaaacctcctcgtgccgac
atcaccggctacatcctgagctttgagtcagctgacggctccttcagggaggttgttctc
agtcccactgctgtgtcgtacaacatggctcagctcagcgcctccactgagtattcagtc
agactgcaggccatcgctggacctaagaggagcagaatcatcaccactgtcctcaccacc
actggtgtgttgtacagacatcccagagactgctctcaggctctgctgaacggcgacaca
tcatcaggtctgtacaccatctacgtgggaggagacgaaaaccagcccgtccaggtttac
tgtgacatgggcactgatgggggcggatggatcgttttcctcagacgccagagcgggaag
ctggagtttttccgcaactggaagaattacacgggcggctttggcgacatgaatgatgaa
ttctggctcggtttgtccaaccttcataagatcacagcaggaggtcagtacgagctgcgg
gtcgacctgagagacaaaggtgaagccgcctacgctcagtacgacaagttctccgtctct
gaacctcgaacccgctacaaagtgcacgtgggtggatacagtggaacagcaggcgactcc
atgacgtatcaccacggtcgtccgttctccacctatgaccacgacaacgacatcgccgtc
accaactgcgctctgtcctacaaaggagcgttctggtataaaaactgtcaccgggtcaac
ctcatgggacgatacggagacaacagtcacagcaagggcgtgaactggttccactggaaa
ggccacgagcactcgatcgagttcgccgagatgaagatcagaccctccaacttcagaaac
ctggagggacggaggaaacgatcataa
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