Solea solea (common sole): 131463875
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Entry
131463875 CDS
T10853
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131463875 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoe03021
]
131463875 (smarca2)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131463875 (smarca2)
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131463875 (smarca2)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
131463875 (smarca2)
Chromatin remodeling factors
BAF complex
131463875 (smarca2)
PBAF complex
131463875 (smarca2)
GBAF(ncBAF) complex
131463875 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
QLQ
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
131463875
NCBI-ProteinID:
XP_058491945
LinkDB
All DBs
Position
8:complement(13480407..13521975)
Genome browser
AA seq
1587 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYPMHKPMDGMNDKVMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHAPSPMSGGTGGGGPTPPHMPPSQSGQMMSMDPQGGMANMSNMGQ
QGRGPSAFSPVQLQQLRAQILACKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQQQQ
QPAPGGSPYNRPPGMTMAPISGPQSSPCPTPAMQGHNQSTGPKPWPDGQGAENQANSQKH
LTPASSGRPSPVPPQTTAVPAGPLPGSSVTPQPPGQQVSPMLQMQQKQNRVTPIQKPQGL
DPVRILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVV
ACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQ
HAKDFKEYHRSVSGKMQKLTRAIANWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKL
IDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRKKKKKKVDGDGEGTSAIG
PDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEES
GSEFEEEEEEEVAKTETEEKKIIDPTEAGGTTNDVKHVIETAKQDVDDEYSVPTGQTFSQ
SYYGVAHAVIERVDKQSSLLINGMLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQT
IALITYLMEHKRINGPFLIIVPLSTLSNWVYELDKWSPSIVKIAYKGTPALRRGLVPQLR
SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL
TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH
KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKG
GAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIISGPELYRASGKFELLDRILP
KLHATSHRVLLFCQMTTLMTIMEDYFSYRNFQYLRLDGTTKAEDRALLLKKFNEEGSQYF
IFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV
EEKILAAAKYKLNVDQKVIQAGMFDQKSSGQERRVFLQAILEHEEQNEEEDEVPDDETLN
QMIARIEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEE
EKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEIEEEIRLKKRKRKRRQDKDSSSRE
DGGSKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYRDGSGRQLSEVFVQLPSRKEL
PEYYELIRKPVDFKKIKERVRNHKYRSVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQ
SVFKSARQKIAKDEESDDDSDEDDDDEDESEAEAKSVRVKIKLNKEARSHDKGKKRQSRG
KAKPVVSDDDSDDDQDDNDQSDKSDDE
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccctcagatacatcaggtggtatgtcccatcctggcccttctccgggagct
ggtctctccccagggccaatcttgggccccagccctggaccggacccctcaccaggctct
gttcacagtatgatgggacctagtccaggccctggaacacccaatgcacctcatggcatg
cagggccaggggcaaagtgattactctcaggacagcatgtatcctatgcacaagcccatg
gacggtatgaatgacaaggtaatggcagatgcgatgcactttggtcacatgaaaggtgtg
ggcatgagatctctgcacagtgggatgggccctccacagagtcccatggaccagcacagc
caaggttacatgtcaccacatccatcccccatgggtgtgcatgagcatgctcctagccca
atgtcaggaggtacaggaggtggggggcccacacctccccacatgccaccctcacaatca
ggtcagatgatgtccatggatccccagggaggcatggccaatatgtccaacatgggccag
caggggcggggaccctctgcttttagcccagtccagctgcagcagctcagagctcagatt
ctggcctgcaagatccttggccgtgggcaacctctgcctgaaaacctacagctggctgtt
cagggcaagaggagcctacccacaatgcaacagcagcagcaacaacaacagcagcaacaa
cagccagcacctggtggtagtccttataacaggcccccaggtatgacaatggcacctatt
agtggaccccagtcaagcccctgcccaaccccagctatgcaaggacacaatcaaagcaca
ggacctaagccttggcctgatggtcagggggccgaaaatcaagccaattctcagaagcac
ctcactcctgcttccagtggacgcccgtcccctgtgccacctcagaccactgctgtgcca
gctgggcctttgccaggcagttcagtgacccctcagcctcctggacagcaggtgtccccc
atgcttcagatgcagcagaagcagaaccgggtcacaccaattcagaaacctcaaggcttg
gacccagttaggatccttcaggaacgagagtacaggttgcaggctcggattgcacatcga
atccaggaactggagagtctgccaggctccctgcctcctgatctgaggaccaaagccaca
gtggaactcaaggcactgcgtttactcaacttccagcggcagctgaggcaggatgtggtg
gcttgtatgaggcgagacacgaccctggagacggccctcaactccaaggcgtacagacgc
agcaagcggcagacactgagggaggctcgcatgaccgagaagctggagaagcagcaaaag
ctggagcaggaaaagaagcgcagacaaaaacatcaggaatatctcaacagtatccttcag
catgccaaggacttcaaagagtatcaccgttctgtgtctggtaaaatgcagaaactcaca
cgggctattgccaactggcataccaacacagagcgcgaacagaagaaggagacggagagg
attgagaaggagaggatgagaaggcttatggcagaagatgaagaaggctaccgaaaacta
attgaccaaaagaaagacaagcgtttggcctacttgctgcagcagacagatgaatacgtg
gccaacctcaccaccctggtgtatgaacacaaagctgcccaagctgctaaggagaagaag
aggaggaagaagaaaaagaagaaggtggatggcgatggcgaaggtactagtgccattgga
cctgatggagagcccatggatgagagcagccagatgagtgagctgccagtcaaagtgatt
cagactgagactggaaaagttttgcagggaacggatgctcccaaatccagtcagctggag
gcctggcttgagatgaaccctggatatgaagtggctccacggtcagacagcgaggagagt
ggttctgagtttgaggaggaggaggaagaggaggttgcgaagacagaaacagaggagaag
aagataattgatcccactgaagctggaggaactacgaatgatgtcaaacacgtcattgag
actgctaagcaggacgtggatgatgaatacagtgttcccactggacaaaccttctcccag
tcttactatggtgtggcccacgccgtcattgaaagggtggataagcagtcgtcactgctg
atcaacggcatgcttaaacattaccagatccaagggctggagtggatggtgtccctgtac
aacaacaatctaaatggcattctggctgatgagatgggcctcggcaaaactatacaaacc
atcgccctcatcacctacctgatggagcacaagagaatcaatggtccctttctcatcatc
gttcctctctcgactttgtctaactgggtttatgaactagacaagtggtcaccctcaatt
gtgaaaattgcctacaagggcacccctgcattgcgccgtgggctcgtacctcagctccgc
agcggtaaattcaatgtcttgctgaccacctatgaatacatcatcaaggacaagcacata
ctggccaagattcgttggaaatatatgattgtggatgagggtcacaggatgaagaaccac
cattgcaagttgactcaggtgctgaacacccactatgtggctccccgccgtctcctcctc
actggtacacccctgcagaacaaacttcccgagctatgggccttgctcaacttcctcctg
cccactatcttcaagagctgcagcaccttcgagcagtggttcaatgcaccattcgctatg
acaggagagagggtggacctaaatgaggaggaaaccatcctgataattcggcgtttgcat
aaggtgctccgtcccttccttctacgcagactaaagaaagaggtggagtctcagctgcca
gagaaggtggagtatgtcataaaatgcgacatgtctgccatacagaaagttctgtatcgc
cacatgcagaaaggaatccttctcactgatggctcagagaaagacaagaagggcaaagga
ggagcaaagaccctgatgaacaccatcatgcagctcaagaagatctgcaaccatccctac
atgttccagcacattgaggaatcttttgcagagcaccttggctttccaaacggcataatc
agtgggccagaactttatagagcctctgggaaatttgagcttctagatcgcatcctgcca
aagcttcatgccacctcacacagagtcctgctgttctgccagatgaccactctcatgaca
atcatggaagactacttcagctaccgcaactttcagtatttacgacttgatggaaccacc
aaggctgaggaccgagcgttactgttgaagaaatttaatgaggaaggatctcagtacttc
atcttcttgctcagcacaagagccggtggccttggcctcaacctgcaggctgctgacact
gtcgtcatttttgacagtgactggaatccccaccaggaccttcaggctcaggaccgggct
caccgcattggtcagcagaatgaagtgcgcgtgcttcgcctctgcactgtcaacagtgtg
gaagagaaaatccttgcagctgccaagtacaaattgaacgtggatcagaaggtcatccag
gctggcatgtttgaccagaagtcctcgggccaagagcgccgtgtcttcctgcaagccatt
ttagaacacgaggagcagaatgaggaagaagacgaggtaccagatgatgaaaccctcaac
cagatgatagcccgcattgaagatgaatttgaactttttatgcgcatggacatggacaga
cgcagagaggacgccagaaacccaaagcgcaagcctcgtctaatggaggaggacgagttg
ccgtcttggatcatcaaagacgacgctgaggttgaaaggctgacgtatgaagaagaggaa
gagaagatgtttggccgaggctcgcgctgtcgtcgggatgtagactacagtgacaccctg
actgaaaaacagtggctacgggcgatcgaggatggaaacctggaggagatagaggaggag
atccggctcaaaaagcgcaaacgtaagagacgtcaggacaaggactcttcaagcagagaa
gatggaggcagcaaggctaagaagcgacgtggaaggccaccagcagagaaactctccccc
aaccctcctaaactcaccaagcaaatgaatgccatcattgatacagtaatcaactacaga
gatgggtcaggaagacaactaagtgaggtctttgttcagctgccatcccgaaaggagctc
ccagaatattatgagttgatcagaaaaccggtggacttcaaaaagatcaaagaacgtgtg
agaaatcataaatacaggagtgtgggtgacctggagaaggatgtgatgctgctctgtcac
aacgctcagactttcaacttggagggatcccagatatatgaagactccattgtccttcag
tctgttttcaagagtgccaggcagaagatagccaaagatgaagagagtgatgatgacagc
gacgaggacgatgatgatgaggacgagtcagaggctgaagccaagtcagtgcgagttaag
atcaagctgaataaggaggcgaggagccatgacaaaggcaaaaagaggcaaagccgaggg
aaggccaagccggtggtcagcgacgatgacagtgacgacgaccaggatgataatgatcag
tcggataagagtgatgacgaatga
DBGET
integrated database retrieval system
