Solea solea (common sole): 131463887
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Entry
131463887 CDS
T10853
Symbol
cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131463887 (cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131463887 (cnot6l)
Enzymes [BR:
ssoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
131463887 (cnot6l)
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131463887 (cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131463887 (cnot6l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
LRR_9
type_II_gspD_N0
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
131463887
NCBI-ProteinID:
XP_058491981
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Position
8:complement(29452916..29464347)
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AA seq
553 aa
AA seq
DB search
MPKEKYDPPDPRRCYTIMPAEEVASGKKCHWTELEISGRVRSLSSSLWTLTHLTTLHIND
NNLSRIPPDIAKLPNLVYLNLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQEPDGTRKLLNYMLDNLAVHPEQLPQRPWITLKERDQMIA
TAVFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEITSCDADIISLQEVETEQ
YYTLFLETLKERGYDGYFCPKSRAKLVSEQERKHVDGCAVFFKTDKFTLVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVNKDTFSGGMKPPQERQLVLVANAHMHWDPEY
SDVKLIQTMMFLSELKSIAERASGSVATGSPTSDPSSIPIVLCADLNSLPDSGVVEYLSD
GGVADNHKDFKELRYSDCLTNFNCNGKNGNSDGSITHSFQLKSAYDSNLMPYTNYTYDFK
GVIDYIFFSKTHMSVLGLLGPLDSQWLVDNNITGCPHPHIPSDHFSLLAQLELHPPLPHP
LNPLNGLHLPVNR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgaccctccagatcctcgcagatgttacaccatcatgccagca
gaggaggtggccagtgggaagaagtgtcactggactgagctcgagatatcaggtcgcgtg
aggagcctgagcagctcgttatggacgctcactcacctgacaacgctgcacatcaacgac
aacaacctgagccgcatcccgccggacatcgccaagctgcccaacctggtctacctgaac
ctgtcgtccaataagctgcggagtctgcccgccgaactgggcaacatggtctctctcagg
gaattgcttttaaacaacaatctattgcgagtcctgccttatgaacttgggaggctgttc
cagttacaaactctggggcttaaaggaaaccctttgtcccaggacatcctaaacctgtac
caggagcccgacggaaccaggaagcttttgaactacatgcttgacaatctcgcagttcat
ccagagcagctgcctcaaagaccgtggatcactctgaaagagcgagaccagatgattgcc
acagccgtgttcacagtcatgtgttacaacgtgctgtgtgataagtacgccacgcggcag
ctctacggctactgtccgtcctgggctctcaactgggaatatcgtaagaaaggcatcatg
gaggaaatcaccagctgtgacgccgacatcatcagcctgcaggaggtcgagacggaacaa
tactacaccttgtttctagaaacgctaaaggagcgcggctacgacggctacttctgtcca
aaatctcgtgccaaactggtttctgaacaggagaggaaacacgtggacggctgcgcggtg
ttcttcaagaccgacaagttcactctggtgcagaaacacactgtggagtttaaccaggtg
gcgatggccaactctgaggggtcagaggtcatgctgaacagagtgatgaccaaagacaac
ataggggtggcggtcctgctcgaggtcaacaaggacacgttctccggtgggatgaagcct
cctcaggagcgacagctcgtcctggtggctaacgctcacatgcactgggatcccgaatat
tcggacgtgaagctgatccagaccatgatgttcctgtcggagctgaagagcatcgccgag
agagcgtcgggctccgtggcgaccggctcgccgacctctgacccttcgtccatccctatc
gtcctgtgtgctgacctcaactcgctgccggattctggtgtggtcgagtacctgagcgac
ggcggcgtcgccgacaaccacaaggactttaaggagctgcgttacagcgactgtctgacc
aacttcaactgcaacggcaaaaacggcaactctgacggaagcatcacacacagcttccag
ctgaagagcgcctacgacagcaatctgatgccttacaccaactacacgtacgacttcaag
ggtgtgatcgactacatcttcttctctaagacccacatgagcgtgctgggtctgctggga
cctctggacagccagtggctcgtggacaacaacatcacgggctgcccgcacccccacatc
ccctcggaccacttctccctgctggcccagctggagctccacccacccctgccccaccct
ctcaaccccctcaacgggctgcacctgcccgtcaacaggtag
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