Solea solea (common sole): 131463969
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Entry
131463969 CDS
T10853
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoe03019
]
131463969
03041 Spliceosome [BR:
ssoe03041
]
131463969
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
131463969
Spliceosome [BR:
ssoe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131463969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
131463969
NCBI-ProteinID:
XP_058492155
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All DBs
Position
8:complement(6260463..6269801)
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AA seq
390 aa
AA seq
DB search
MMEDDLPRTLYVGNLSREVTEPLILQVFTQIGPCKSCKMIVDAAGNDPYCFVEFYDHRHA
AASLAAINGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKTAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYESNSKHLSFDEVVNQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSIEGHIVKCYWGKETPDMMNPMQQMPMPQQSKMSFAAA
AQPYGQWGQWYGNGPQISQYVPNGWQVPAYGVYSHSQAWNQQGFNHLPASAGWTGMSAIS
NGGVMEPTQGLNGSMLANQPGMGATGYPTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgatctacccagaaccttgtatgtggggaatctgtccagggaggtcact
gagcccctcatcctacaggtcttcacacagattggaccctgcaagagctgtaaaatgata
gtagatgcagctggaaatgatccgtactgctttgtggagttctatgatcacaggcatgct
gctgcctcattggcagctataaatggaaggaaaataatgggtaaggaggtcaaagtaaac
tgggccacaacaccaaccagccagaaaaaagacaccagtaatcactttcatgtctttgtt
ggagacctcagcccagaaataacaacagaagatgtcaaaactgccttcggcccctttggc
aggatatcagatgctcgtgttgtgaaagatatggctacagggaagtctaaaggctatggc
tttgtgtctttcttcaacaaatgggatgcagagaatgctattcagcagatggggggtcag
tggttagggggaaggcagattcgaactaactgggccacaagaaagccccccgccccaaag
gccacatatgaaagtaactccaagcacctttcctttgatgaagtagtcaatcagtccagt
cccagcaactgtactgtgtattgtggtggagtcagctcaggcctgacagaacaactgatg
agacagactttctctgcctttggacaaatcatggaaatccgagttttcccggataaaggc
tattcatttgtgaggtttaactcccacgagtcagcagcccatgctattgtgtcagtgaat
ggcacttcaatagagggacacatagttaaatgctactggggtaaagagaccccggacatg
atgaacccgatgcagcagatgccaatgcctcagcagagcaagatgagcttcgctgctgcc
gcccagccctatggccagtggggccagtggtacggcaacgggccccagattagccagtat
gtcccgaatgggtggcaggtccccgcctacggcgtctacagccacagccaggcctggaac
cagcagggcttcaatcacttaccggccagtgctgggtggactggcatgagcgccatcagt
aacggtggggttatggagcctacacagggattgaatgggagtatgctagccaaccagcct
ggtatgggagccacgggataccccacgcactga
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