Solea solea (common sole): 131464079
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Entry
131464079 CDS
T10853
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03030
DNA replication
ssoe03410
Base excision repair
ssoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131464079 (pole)
03410 Base excision repair
131464079 (pole)
03420 Nucleotide excision repair
131464079 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoe03032
]
131464079 (pole)
03400 DNA repair and recombination proteins [BR:
ssoe03400
]
131464079 (pole)
Enzymes [BR:
ssoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131464079 (pole)
DNA replication proteins [BR:
ssoe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
131464079 (pole)
DNA repair and recombination proteins [BR:
ssoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
131464079 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf-RRPl_C4
Spidroin_N
CENP-B_dimeris
CpXC
Motif
Other DBs
NCBI-GeneID:
131464079
NCBI-ProteinID:
XP_058492340
LinkDB
All DBs
Position
8:21638441..21657357
Genome browser
AA seq
2291 aa
AA seq
DB search
MVLQNSGRYKAERGQGGGDQDNQDDGSALKRLERSQFTDEMDARFGFDRVKEPGEKTGWL
INIHPTEILDEDKRMISAVDFYFIQEDGNRFKVALPFKPYFYVATKRNCDREVISYLSKK
FQGKVTKLETLAKEDLDLPNHLVGLKRSYIKLSFNTVDDLMKVKREIAPAVRKNREREQS
NDAYTSMLSSAMAGGSLTSADEEGTSKSISDQLDNIVDMREYDVPYHVRVSIDLKIHVAH
WYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDG
QGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEEALIKRWFDHVQETKPNIFVTY
NGDFFDWPFIETRATLHGLNMYREIGFQKDNQGEYKSSQAIHMDCYRWVKRDSYLPVGSH
NLKAAAKAKLGYDPVELDPEEMCRMATEESQTLATYSVSDAVATYYLYMKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVMDSETYVGG
HVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEKIPLEQVTNFNEVCDE
IKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGAT
CQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHNLNREEQAKHEKKR
LSEYCRKAYKKVHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSSA
QDSSDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAKI
ITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIMVK
EGFTNDQYHELVDPASLTYVTRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLDEVYESVAKVADYWLDVLYSKAA
NMPDAELFELISENRSMSKRLEDYGELKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISR
KPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKTPSLHDLDIRSILDWSYYIERLGSAIQ
KIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFSSEGKRQVARQPLEA
GQAADIEDFGMPARPLQPAILISTKRKRASQGDDSQVESQDLELTQSWREILGPPPPMGK
TREAHLVWLRYHKKKWELQIRQRKERRKKRRLLDGEAQSVGGGVIRDGPTTGLGSFLRKT
ARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGATYK
KVNRLLPRSNVVYYLYKYCVPEDMYQEHINQINADLSAPDIEGVYETQVPLLFRALVQLG
CVCMVNKHVVRDLGGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALFGL
FIPSQRKASIFVLDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPEKHNFEVRAENDAK
AIYRALQRVLLSYKDERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVADEISYNVL
DWQRLGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHNH
LLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTILQS
HHVNDMEGGASVGVSFDVIQQASLEDMMSGNQGASAVASYDETALCSNTFRILKSMVVGW
VREITQYHNVYADNQVMHFYRWLRSPSSLLFDPALHRTLLNMMKKVFLQLVAEFKRLGST
VVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSREIFHSLSLSFSRCWEFLLWMDPANH
GGVKGKLPSNVLYGEESAKQKKNNGGEGDEDGSEDEDEEEAEAEEQEETDEVEELIESNW
NIMQYLPQTASCQKYFLMIVSAYIAAVYHSMREELRRNTPGATPVKRRGGSQASQQAVGD
LSALPGLISFSQEYVSSELTHNLFTITQKIQKKVTGTRGVSQPSEMFPVLPGSHLLLKNP
ALEFIKYVCQVFSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFHDPCNSYVLPEVICHQ
CNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMSYSLQDLV
CNKCKGVKEANMPLYCRCAGDFDLSFSAKSFSEQIAVFRNIASHYNMSFLEETIDWLLEM
SPHVSQSAHSM
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggaagatataaagccgagcgaggacaaggcggaggagaccag
gacaaccaggacgatggatccgctctcaagcggctggagcgcagccagttcaccgacgag
atggacgcccgcttcggcttcgacagggtgaaggagccgggggagaaaacaggctggctg
atcaacatccaccctaccgagatcctggatgaggacaagaggatgatcagtgctgtggac
ttttatttcattcaagaggatggtaataggtttaaggtggctttacctttcaagccatac
ttctacgtagccactaaaaggaactgtgacagagaagtcatctcgtacttgtccaagaag
ttccaaggaaaggtgacaaagcttgaaactctcgcgaaagaggacctcgacctgccaaac
catttagtgggactgaagagaagctacatcaagctgtcgttcaacaccgtggacgacctc
atgaaagtgaagcgagagatcgccccggcagtccgtaagaacagagagagggaacagtcc
aacgacgcctacacctcgatgttgtccagtgcgatggcaggcggcagcttaacctccgcg
gatgaagaggggacgtcaaagagcatttcagaccagttggacaacatcgtggacatgaga
gagtacgacgtgccgtatcatgtgcgagtctccatcgatctcaagatccatgtggctcac
tggtacaatgttcgctacagaggaagcgcatatccaccagagattgtacggagagatgat
cttgtggagcgaccggatcctgttgttttggcttttgacatcgagacgacaaaactccca
ctgaaatttccagatgcagagacggaccagattatgatgatctcctacatgatagacgga
caggggtttctgatcacaaaccgcgagattgtctctgaaaacatcgaggattttgagttc
acgcccaaacctgaatatgaaggacctttcactgttttcaatgaagatgacgaggaggct
ctcattaagaggtggtttgatcacgttcaagagacgaagccaaacatctttgtgacgtac
aacggagacttctttgattggccttttattgagactcgagcgacgctgcatggactgaac
atgtacagggagattggattccaaaaggacaaccagggagagtacaagtccagtcaggcc
attcacatggactgctataggtgggtaaagagagacagttacctgccggtggggagtcat
aacctgaaggcagcagcaaaggctaaactgggctatgacccggtggagctggacccagag
gagatgtgccgcatggctacagaggagtcacagactttagcaacctactctgtgtcagat
gccgtggccacgtattacctgtacatgaaatatgtccatcccttcatcttcgctctgtgt
acgatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggactctgtgcgag
gccttgctcatggtgcaggccttccacgccaacatcatcttccccaacaagcaagagcag
gtcttcaacaagctgacggacgacggccacgtcatggactctgagacttacgtcggtggc
cacgtggaggctctggagtctggtgtgtttcgcagtgacatcccctgccgtttcaaaatg
aacccagctgcctttgacttcctgctgcaaagagtcgaaagaacgatgcgtcatgccatc
gaggaagaggagaaaatccctctggagcaagtcacaaactttaatgaggtttgtgacgag
ataaagaagaagctgacttctctgaaggaggtgccaaacaggattgaatgtcctctcatc
taccatctggacgttggggcaatgtaccccaacatcattctcaccaaccgcctgcagcca
tctgctatggttgatgaggccacttgtgctgcctgtgactttaacaagcctggagccacc
tgtcagaggaggatggcctggcagtggagaggagaaatcatgcccgccagtcgcagcgag
tttcaccgcatccagcagcaacttgagtccgagaagttcccgccgttcttccccaacgga
ccaccgcgagccttccacaatctcaacagagaggagcaggccaagcatgagaagaagcgt
ttgtcagaatactgtaggaaagcctacaagaaggtacacgtcaccaggctggaggagcga
gtcaccaccatctgtcagagagaaaactccttctatgttgataccgtgagagctttcaga
gatcggcgttacgaattcaaaggactgcacaaggtgtggaaaaagaagctgtcgtcagct
caggacagcagtgacgctgccgaggtgaagcgctgcaagaacatggagatcctgtacgac
tctcttcagctggctcacaagtgtattctcaactctttctatggctacgtcatgaggaaa
ggggcgcgctggtactccatggagatggcgggcattgtgtgcttcactggggccaaaatc
atcacacaagcccgagagcttatcgaacaaatagggagaccacttgagctggacactgat
ggtatctggtgtgtcctacccaacaccttccccgagaacttcgtggtgaagacgagcaac
gagaagaagcccaaggtgaccatctcctacccgggggccatgctgaacatcatggtgaaa
gagggtttcaccaacgaccagtaccacgagctggtcgaccccgcgtccctcacttacgtc
accagggcggagaacagcatcttcttcgaggtggacggaccgtacctggcgatgatcctg
cccgcctctaaagaggaaggaaagaagctgaagaaaaggtacgctgtgtttaatgaggac
ggctctcttgctgagctgaagggatttgaggtgaagagaagaggagagctccagctcatt
aagatttttcaatcatcagtgtttgaggcgttcctcaaaggcaccactctagacgaagtc
tatgagtctgtggccaaagtggccgactactggctggacgtcttgtacagcaaggctgcc
aacatgccagatgcggagctgtttgaactgatttcagagaatcgctccatgtccaaaagg
ctcgaggactacggggagctgaagtccacctccatcagcacggcgaagagacttgccgag
ttcctgggagaccagatggtgaaagacgccggtctgagctgtcgctacgtcatctcccga
aaaccggagggttcccctgtcacagaaagagccattcccctggccatcttccaggcagag
cccagtgtgaagaaacatttcctccgtaagtggctgaagacgcccagcctgcatgacttg
gacattcgttctatccttgactggagttattacatagagaggttgggtagcgccattcag
aaaatcataaccatccccgcagctctgcaacaggtgaagaacccagttcccagagtgagg
catcctgactggcttcataagaaactgctggagaaaaatgacatttacaagcaaaagaaa
ataagtgaattgttcagcagtgaaggcaagagacaggtggctcgtcagcctcttgaagcc
ggccaagctgcagacatagaggactttgggatgccggccagacctctgcagccagcgatt
ctcattagcaccaagcggaagcgagcttctcaaggcgatgacagccaagtagagtctcag
gatctcgaactcactcagtcctggagggagatcctggggccacctccacctatgggaaag
acacgggaggcgcatctagtgtggctgcgctaccataagaagaagtgggagctgcagatc
aggcagagaaaggagagaaggaagaagaggaggcttttggacggcgaagcccagtctgta
ggtggaggtgtgatcagagatggccccaccaccggcctcggaagcttcctgcgtaaaaca
gcgcggagcatcctggacatgccatggcaaattgtgcagattgcagagacgagtcaccct
ggtttgtataaactgtgggctgtgattggaaatgacctccactgcatgaagctcaacatc
ccacgcgtcttctacgtcaatcagaaagtcccgaaacaagaggagggagccacgtacaaa
aaggtgaaccgcctgctgcctcgctccaacgtggtgtactacctctacaagtactgtgta
ccagaggacatgtaccaggagcacatcaatcagatcaacgcagacctctctgctccagac
attgaaggagtctatgaaacacaggtccccttgctgttccgtgcactggtgcagcttgga
tgtgtgtgtatggtcaacaaacatgttgtgagggatctgggcggcagggaggctgacacg
tttgacctggaacatctggagatgagatctctggcccagtttagctacctagaacctggg
agcgttcgccacatgtacttgtatcatcacagccagggtcacaaggctctgtttggtctc
ttcatcccctctcagcgcaaagctagcatctttgtcctggacacagtcagaagcaaccag
atgccaaacctgagtaacctctacacagccgaacgcactgccctcctggagaagacgacg
gaggagcttctgcctccagagaaacacaactttgaagtccgagctgaaaatgacgcaaag
gctatctatcgtgcactacagcgcgttctgctaagttacaaggacgagcgtcgcggtccc
actctcatcgctgtgcagtcaaactgggagctgcgtcggttggcggcggggatgcccgtg
cttgaggagtttccagttgttccagtacatgtggccgacgagatcagttacaacgtgcta
gactggcaaaggctcggtgcccggcgcatgatccgccactacctcaacctggacagctgc
ctgtcacaggccttcgacatggccaggtattaccacttacctgtgggaaacctgcctcag
gatgtgtccatctttggctcggacttgttcctggcgagacatcttcggaaacacaaccac
ctgttgtggctctcacccacggccagacctgacctcgggggaaaggaagctgatgacagt
cgcctggtcatggaaagcgatgaccggggctctgtggagattaacgctcaaggatgctac
tccactgtgtgtgtggagctggacctgcagagcctggcagtgaacaccatcctgcagtcg
caccatgtcaatgacatggagggcggagccagtgtgggcgtcagttttgacgtgatccag
caagcctcgctggaggacatgatgtcaggaaatcagggagcaagcgccgtcgctagttat
gatgagacggcactttgctccaacaccttcagaatcctgaagagcatggtggtgggatgg
gtcagggagatcacgcagtaccacaacgtgtacgcagacaaccaggtgatgcacttctac
cgctggctgcgctccccgagctctctgctctttgaccctgcgctgcaccgcaccctgctc
aacatgatgaagaaggtgtttctacagctcgtagcagagttcaaacgtcttggttcaact
gtggtgtacggaaacttcaacaggatcatcctgtgcacgaaaaaacggaggatcgacgat
gcaatcggatatgtggaatacatcactaacagcatccactccagagaaatcttccactcg
ttgtctctgtccttctcccgatgctgggagttcctgctgtggatggacccggccaaccac
ggtggtgtgaagggaaaactgccctccaacgtcctgtatggagaggaaagtgccaaacag
aagaaaaacaacggaggggagggtgatgaggacggcagcgaggatgaggacgaagaggaa
gcggaagccgaggaacaagaggagacggatgaggtggaggagctgattgagagcaactgg
aacatcatgcagtatctgccccaaacggcctcctgtcagaaatacttcctcatgattgtg
tcggcctacattgcagcagtctaccacagcatgagagaggagctgagacgcaacactcct
ggagcgacgccagtcaagaggcgaggaggcagccaggcttcccagcaggcagtgggagac
ctgagtgctcttcctggattgatctccttctcccaggagtacgtgtccagtgagctgacg
cacaaccttttcaccatcactcaaaaaatccagaagaaggtgacgggtaccagaggcgtg
agccagccctcagagatgttccccgtcctgcctggatcccacctgctactcaaaaacccc
gcactggagtttattaaatatgtctgccaggttttctcactggacgccaacatagtaaac
caggtgaacaagctaaagagagacctgctgcgtctcgttgacgttggagaattctcggag
gaagctcagttccacgacccctgcaactcttacgtcctacccgaggtcatctgccaccag
tgcaacttctgtcgcgaccttgacctctgcaaggacccatctgttgcacaggatgggtcc
gtcttgcctcagtggttttgctccaactgtcaggctcagtatgagactgagtctattgag
atggctctggtagaagctctgcagaagaagctgatgagctactcactgcaggacctggtg
tgtaacaagtgtaaaggggttaaagaagcaaacatgcccctctactgcagatgtgctgga
gactttgacctctctttctcagccaagagcttctctgagcagatcgcagtgtttcggaac
atagcgtcccactacaacatgagcttcctggaggagaccattgactggctgcttgagatg
agtccacacgtgagccagagcgctcactcgatgtga
DBGET
integrated database retrieval system
