Solea solea (common sole): 131464299
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Entry
131464299 CDS
T10853
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131464299 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131464299 (usp39)
Spliceosome [BR:
ssoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
131464299 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
131464299
NCBI-ProteinID:
XP_058492703
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Position
8:complement(17877679..17882740)
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AA seq
498 aa
AA seq
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MVSVKRERETEVDDDDNEDEVEAKVGRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLRPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYITIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKTSSITKAFQGSMRIFSKKLPHPDLLP
EEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSEA
YIQIWKRKDIDTNNHMEV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgtgaagcgggaaagagagactgaagtggacgacgatgacaacgaagacgaa
gtggaagctaaagttggacggggacgtgtagtagaagaccggagaagtcgtcactgccct
tatcttgacaccataaacaggagtgtgttggactttgactttgagaagctctgctccatc
tctctgtcccacatcaatgtgtacgcatgccttatatgtgggaaatattttcaaggtaga
ggactgaagtcccatgcttacacacacagtgtacaatttacccatcacgtgttcctcaat
ctacacactctcaagttttactgtctgcctgacaactatgagattattgattcttcacta
gaagacatcacttatgtgctaaggccaactttcaccaagcagcacatttcaggactggac
aagcaaggaaaactgtaccgagcttacgatggtacgacttacctgccgggcattgtgggc
ctcaacaacatcaaagccaatgactatgccaatgtggtgttacaggcattttctaatgtt
ccacctttgcgaaactacttccttgaggaggaaaactacataacaatccgcaggccacca
ggggacatcatgttcctcttggtgcagaggtttggtgagctgatgcgaaaactttggaat
ccgagaaacttcaaggctcatgtttctcctcatgagatgttgcaggctgtggttctgtgc
agcaagaagaacttccaaattaccaagcaaggagatgctgtggacttcatgacgtggttc
ttgaacgctctgcacggtgcacttggagggacaaagaaaaagacttcaagcattactaaa
gcatttcagggctccatgaggatcttctccaagaagcttccacacccagatttactccca
gaggagaaggaggcattactcgtgacagaggagtaccaggaacagatgtctgagtccact
ttcctgtttctgacacttgacctcccaacagctcctctctacaaggatgagaaggagcag
ctcatcatcccacaggtgcctctcttcaacatcctgggcaagttcaatggcaacaccgag
aaggaatacaaaacctacaaagaaaattttctcaaaaggttccagttgaccaaacttcct
ccatacctcattttctgcatcaaaagattcaccaagaacaacttctttgtggaaaagaac
ccaacgattgtcaacttccctatcacgaatgtagacctccgtgagtacttgacagaagaa
gctcaagttacagagaagaacacgacttatgacctcgtcgccaatgtagtgcatgatggg
aagcccacggagggagcgtacagaatacatgttctgcatcatggaactgggaagtggtat
gagatgcaagacctgcaggtgactgacattctcccccagatgatcacgctgtcagaagcc
tacatccagatctggaagagaaaagacattgacacaaacaaccacatggaggtgtaa
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